def from_config(cls, cp, section, variable_args):
"""Returns a distribution based on a configuration file. The parameters
for the distribution are retrieved from the section titled
"[`section`-`variable_args`]" in the config file.
Parameters
----------
cp : pycbc.workflow.WorkflowConfigParser
A parsed configuration file that contains the distribution
options.
section : str
Name of the section in the configuration file.
variable_args : str
The names of the parameters for this distribution, separated by
`prior.VARARGS_DELIM`. These must appear in the "tag" part
of the section header.
Returns
-------
IndependentChiPChiEff
A distribution instance.
"""
tag = variable_args
variable_args = variable_args.split(VARARGS_DELIM)
if not set(variable_args) == set(cls._params):
raise ValueError("Not all parameters used by this distribution "
"included in tag portion of section name")
# get the bounds for the setable parameters
mass1 = get_param_bounds_from_config(cp, section, tag, 'mass1')
mass2 = get_param_bounds_from_config(cp, section, tag, 'mass2')
chi_eff = get_param_bounds_from_config(cp, section, tag, 'chi_eff')
chi_a = get_param_bounds_from_config(cp, section, tag, 'chi_a')
xi_bounds = get_param_bounds_from_config(cp, section, tag, 'xi_bounds')
if cp.has_option('-'.join([section, tag]), 'nsamples'):
nsamples = int(cp.get('-'.join([section, tag]), 'nsamples'))
else:
nsamples = None
return cls(mass1=mass1,
mass2=mass2,
chi_eff=chi_eff,
chi_a=chi_a,
xi_bounds=xi_bounds,
nsamples=nsamples)
def from_config(cls, cp, section, variable_args):
"""Returns a distribution based on a configuration file. The parameters
for the distribution are retrieved from the section titled
"[`section`-`variable_args`]" in the config file.
Parameters
----------
cp : pycbc.workflow.WorkflowConfigParser
A parsed configuration file that contains the distribution
options.
section : str
Name of the section in the configuration file.
variable_args : str
The names of the parameters for this distribution, separated by
`prior.VARARGS_DELIM`. These must appear in the "tag" part
of the section header.
Returns
-------
IndependentChiPChiEff
A distribution instance.
"""
tag = variable_args
variable_args = variable_args.split(VARARGS_DELIM)
if not set(variable_args) == set(cls._params):
raise ValueError("Not all parameters used by this distribution "
"included in tag portion of section name")
# get the bounds for the setable parameters
mass1 = get_param_bounds_from_config(cp, section, tag, 'mass1')
mass2 = get_param_bounds_from_config(cp, section, tag, 'mass2')
chi_eff = get_param_bounds_from_config(cp, section, tag, 'chi_eff')
chi_a = get_param_bounds_from_config(cp, section, tag, 'chi_a')
xi_bounds = get_param_bounds_from_config(cp, section, tag, 'xi_bounds')
if cp.has_option('-'.join([section, tag]), 'nsamples'):
nsamples = int(cp.get('-'.join([section, tag]), 'nsamples'))
else:
nsamples = None
return cls(mass1=mass1, mass2=mass2, chi_eff=chi_eff, chi_a=chi_a,
xi_bounds=xi_bounds, nsamples=nsamples)
def from_config(cls, cp, section, variable_args):
"""Returns a distribution based on a configuration file.
The section must have the names of the polar and azimuthal angles in
the tag part of the section header. For example:
.. code-block:: ini
[prior-theta+phi]
name = uniform_solidangle
If nothing else is provided, the default names and bounds of the polar
and azimuthal angles will be used. To specify a different name for
each angle, set the `polar-angle` and `azimuthal-angle` attributes. For
example:
.. code-block:: ini
[prior-foo+bar]
name = uniform_solidangle
polar-angle = foo
azimuthal-angle = bar
Note that the names of the variable args in the tag part of the section
name must match the names of the polar and azimuthal angles.
Bounds may also be specified for each angle, as factors of pi. For
example:
.. code-block:: ini
[prior-theta+phi]
polar-angle = theta
azimuthal-angle = phi
min-theta = 0
max-theta = 0.5
This will return a distribution that is uniform in the upper
hemisphere.
By default, the domain of the azimuthal angle is `[0, 2pi)`. To make
this domain cyclic, add `azimuthal_cyclic_domain =`.
Parameters
----------
cp : ConfigParser instance
The config file.
section : str
The name of the section.
variable_args : str
The names of the parameters for this distribution, separated by
``VARARGS_DELIM``. These must appear in the "tag" part
of the section header.
Returns
-------
UniformSolidAngle
A distribution instance from the pycbc.inference.prior module.
"""
tag = variable_args
variable_args = variable_args.split(VARARGS_DELIM)
# get the variables that correspond to the polar/azimuthal angles
try:
polar_angle = cp.get_opt_tag(section, 'polar-angle', tag)
except Error:
polar_angle = cls._default_polar_angle
try:
azimuthal_angle = cp.get_opt_tag(section, 'azimuthal-angle', tag)
except Error:
azimuthal_angle = cls._default_azimuthal_angle
if polar_angle not in variable_args:
raise Error("polar-angle %s is not one of the variable args (%s)" %
(polar_angle, ', '.join(variable_args)))
if azimuthal_angle not in variable_args:
raise Error("azimuthal-angle %s is not one of the variable args " %
(azimuthal_angle) + "(%s)" %
(', '.join(variable_args)))
# get the bounds, if provided
polar_bounds = bounded.get_param_bounds_from_config(
cp, section, tag, polar_angle)
azimuthal_bounds = bounded.get_param_bounds_from_config(
cp, section, tag, azimuthal_angle)
# see if the a cyclic domain is desired for the azimuthal angle
azimuthal_cyclic_domain = cp.has_option_tag(section,
'azimuthal_cyclic_domain',
tag)
return cls(polar_angle=polar_angle,
azimuthal_angle=azimuthal_angle,
polar_bounds=polar_bounds,
azimuthal_bounds=azimuthal_bounds,
azimuthal_cyclic_domain=azimuthal_cyclic_domain)
def from_config(cls, cp, section, variable_args):
"""Returns a distribution based on a configuration file.
The section must have the names of the polar and azimuthal angles in
the tag part of the section header. For example:
.. code-block:: ini
[prior-theta+phi]
name = uniform_solidangle
If nothing else is provided, the default names and bounds of the polar
and azimuthal angles will be used. To specify a different name for
each angle, set the `polar-angle` and `azimuthal-angle` attributes. For
example:
.. code-block:: ini
[prior-foo+bar]
name = uniform_solidangle
polar-angle = foo
azimuthal-angle = bar
Note that the names of the variable args in the tag part of the section
name must match the names of the polar and azimuthal angles.
Bounds may also be specified for each angle, as factors of pi. For
example:
.. code-block:: ini
[prior-theta+phi]
polar-angle = theta
azimuthal-angle = phi
min-theta = 0
max-theta = 0.5
This will return a distribution that is uniform in the upper
hemisphere.
By default, the domain of the azimuthal angle is `[0, 2pi)`. To make
this domain cyclic, add `azimuthal_cyclic_domain =`.
Parameters
----------
cp : ConfigParser instance
The config file.
section : str
The name of the section.
variable_args : str
The names of the parameters for this distribution, separated by
``VARARGS_DELIM``. These must appear in the "tag" part
of the section header.
Returns
-------
UniformSolidAngle
A distribution instance from the pycbc.inference.prior module.
"""
tag = variable_args
variable_args = variable_args.split(VARARGS_DELIM)
# get the variables that correspond to the polar/azimuthal angles
try:
polar_angle = cp.get_opt_tag(section, 'polar-angle', tag)
except Error:
polar_angle = cls._default_polar_angle
try:
azimuthal_angle = cp.get_opt_tag(section, 'azimuthal-angle', tag)
except Error:
azimuthal_angle = cls._default_azimuthal_angle
if polar_angle not in variable_args:
raise Error("polar-angle %s is not one of the variable args (%s)"%(
polar_angle, ', '.join(variable_args)))
if azimuthal_angle not in variable_args:
raise Error("azimuthal-angle %s is not one of the variable args "%(
azimuthal_angle) + "(%s)"%(', '.join(variable_args)))
# get the bounds, if provided
polar_bounds = bounded.get_param_bounds_from_config(
cp, section, tag,
polar_angle)
azimuthal_bounds = bounded.get_param_bounds_from_config(
cp, section, tag,
azimuthal_angle)
# see if the a cyclic domain is desired for the azimuthal angle
azimuthal_cyclic_domain = cp.has_option_tag(section,
'azimuthal_cyclic_domain', tag)
return cls(polar_angle=polar_angle, azimuthal_angle=azimuthal_angle,
polar_bounds=polar_bounds,
azimuthal_bounds=azimuthal_bounds,
azimuthal_cyclic_domain=azimuthal_cyclic_domain)