def tearDownModule():
    # remove index created
    global INI_CONFIG
    os.remove(MY_INI_FILE)
    # requests.delete(ElasticSettings.url() + '/' + INI_CONFIG['DEFAULT']['CRITERIA_IDX_STUDY'])

    PydginTestSettings.tearDownIdx(['DISEASE', 'STUDY_CRITERIA_STUDY_FOR_DISEASE'])
def tearDownModule():
    # remove index created
    global INI_CONFIG
    os.remove(MY_INI_FILE)
    # requests.delete(ElasticSettings.url() + '/' + INI_CONFIG['DEFAULT']['CRITERIA_IDX_GENE'])

    PydginTestSettings.tearDownIdx(['DISEASE', 'GENE_CRITERIA_IS_GENE_IN_MHC', 'GENE_CRITERIA_CAND_GENE_IN_STUDY',
                                    'GENE_CRITERIA_GENE_IN_REGION', 'GENE_CRITERIA_CAND_GENE_IN_REGION'])
Exemple #3
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def tearDownModule():
    ''' Remove test indices '''
    PydginTestSettings.tearDownIdx(['STUDY', 'DISEASE', 'GENE', 'STUDY_HITS', 'PUBLICATION',
                                    'REGION', 'REGION_CRITERIA_IS_REGION_IN_MHC',
                                    'REGION_CRITERIA_IS_REGION_FOR_DISEASE',
                                    'GENE_CRITERIA_GENE_IN_REGION',
                                    'MARKER', 'MARKER_CRITERIA_IS_MARKER_IN_MHC',
                                    'STUDY_CRITERIA_STUDY_FOR_DISEASE'])
def tearDownModule():
    # remove index created
    global INI_CONFIG
    os.remove(MY_INI_FILE)
    # requests.delete(ElasticSettings.url() + '/' + INI_CONFIG['DEFAULT']['CRITERIA_IDX_MARKER'])

    PydginTestSettings.tearDownIdx(['MARKER', 'DISEASE',
                                    'MARKER_CRITERIA_IS_MARKER_IN_MHC', 'MARKER_CRITERIA_IS_AN_INDEX_SNP',
                                    'MARKER_CRITERIA_MARKER_IS_GWAS_SIGNIFICANT_STUDY',
                                    'MARKER_CRITERIA_RSQ_WITH_INDEX_SNP'])
Exemple #5
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def tearDownModule():
    ''' Remove test indices '''
    PydginTestSettings.tearDownIdx(['MARKER', 'DISEASE',
                                    'MARKER_CRITERIA_IS_MARKER_IN_MHC', 'MARKER_CRITERIA_IS_AN_INDEX_SNP',
                                    'MARKER_CRITERIA_MARKER_IS_GWAS_SIGNIFICANT_STUDY',
                                    'MARKER_CRITERIA_RSQ_WITH_INDEX_SNP'])
def tearDownModule():
    """ Remove test indices """
    PydginTestSettings.tearDownIdx(["GENE", "STUDY_HITS", "PUBLICATION", "DISEASE", "MARKER"])
Exemple #7
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 def tearDown(cls):
     PydginTestSettings.tearDownIdx(['STUDY_HITS', 'DISEASE_LOCUS', 'REGION'])
Exemple #8
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def tearDownModule():
    ''' Remove test indices '''
    PydginTestSettings.tearDownIdx(['GENE', 'MARKER', 'STUDY_HITS', 'DISEASE_LOCUS', 'REGION', 'DISEASE', 'IC_STATS'])
Exemple #9
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 def tearDown(cls):
     PydginTestSettings.tearDownIdx(['DISEASE'])
Exemple #10
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def tearDownModule():
    ''' Remove test indices '''
    PydginTestSettings.tearDownIdx(['GENE', 'STUDY_HITS', 'PUBLICATION', 'DISEASE', 'MARKER', 'STUDY'])
def tearDownModule():
    ''' Remove test indices '''
    PydginTestSettings.tearDownIdx(['GENE', 'DISEASE', 'PUBLICATION'])
Exemple #12
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def tearDownModule():
    ''' Remove test indices '''
    PydginTestSettings.tearDownIdx(['REGION', 'DISEASE',
                                    'REGION_CRITERIA_IS_REGION_IN_MHC', 'REGION_CRITERIA_IS_REGION_FOR_DISEASE'])
Exemple #13
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def tearDownModule():
    ''' Remove test indices '''
    PydginTestSettings.tearDownIdx(['GENE', 'DISEASE', 'PUBLICATION',
                                    'GENE_CRITERIA_IS_GENE_IN_MHC', 'GENE_CRITERIA_CAND_GENE_IN_STUDY',
                                    'GENE_CRITERIA_GENE_IN_REGION', 'GENE_CRITERIA_CAND_GENE_IN_REGION'])