def setUp(self):
# test will be skipped if mysql module or ensembldb server unavailable
logger.debug('accessing ensembldb.ensembl.org')
conn = DBServerInfo(host='ensembldb.ensembl.org',
user='******',
passwd='')
try:
translationDB = \
SQLTableCatcher('homo_sapiens_core_47_36i.translation',
serverInfo=conn)
translationDB.catchIter = True # should not iter in this test!
exonDB = SQLTable('homo_sapiens_core_47_36i.exon', serverInfo=conn)
except ImportError, e:
raise SkipTest(e)
