def add_person(data_dict):
"""Adds person item to db.
Args:
data_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.Person, schemas.person.ma_schema, data_dict)
def add_shipment(data_dict):
"""
Adds new shipment
Args:
data_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.Shipping, schemas.shipping.ma_schema, data_dict)
def add_loaded_sample(data_dict):
"""Adds a new ssx loaded sample.
Args:
data_dict ([type]): [description]
Returns:
int, dict: HTTP status code and response dict
"""
return db.add_db_item(models.LoadedSample, schemas.loaded_sample.ma_schema,
data_dict)
def add_sample_delivery_device(data_dict):
"""Adds a new sample delivery device.
Args:
sample_delivery_device ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.SampleDeliveryDevice,
schemas.sample_delivery_device.ma_schema, data_dict)
def add_dewar(data_dict):
"""
Adds a dewar to db.
Args:
data_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.Dewar, schemas.dewar.ma_schema, data_dict)
def add_crystal(data_dict):
"""
Adds a crystal to db.
Args:
data_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.Crystal, schemas.crystal.ma_schema, data_dict)
def add_protein(data_dict):
"""
Adds a protein to db.
Args:
data_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.Protein, schemas.protein.ma_schema, data_dict)
def add_session(data_dict):
"""
Adds new session.
Args:
session_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.BLSession, schemas.session.ma_schema, data_dict)
def add_motion_correction(data_dict):
"""
Adds new motion_correction.
Args:
motion_correction_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.MotionCorrection, schemas.motion_correction.ma_schema, data_dict)
def add_sample(data_dict):
"""
Adds a sample to db.
Args:
data_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.BLSample, schemas.sample.ma_schema, data_dict)
def add_laboratory(data_dict):
"""
Adds new laboratory.
Args:
laboratory_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.Laboratory, schemas.laboratory.ma_schema,
data_dict)
def add_lab_contact(data_dict):
"""
Adds a new lab contact.
Args:
data_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.LabContact, schemas.lab_contact.ma_schema,
data_dict)
def add_container(data_dict):
"""
Adds a container to db.
Args:
data_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.Container, schemas.container.ma_schema,
data_dict)
def add_sample_stock(data_dict):
"""Adds a new crystal slurry item.
Args:
data_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.SampleStock, schemas.sample_stock.ma_schema,
data_dict)
def add_robot_action(data_dict):
"""
Adds data collection item.
Args:
robot_action_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.RobotAction, schemas.robot_action.ma_schema,
data_dict)
def add_diffraction_plan(data_dict):
"""
Adds a diffraction_plan to db.
Args:
data_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.DiffractionPlan,
schemas.diffraction_plan.ma_schema, data_dict)
def add_detector(data_dict):
"""
Adds data collection item.
Args:
detector_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.Detector, schemas.detector.ma_schema,
data_dict)
def add_beamline_setup(data_dict):
"""
Adds data collection item.
Args:
beamline_setup_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.BeamLineSetup,
schemas.beamline_setup.ma_schema, data_dict)
def add_proposal(data_dict):
"""
Adds a proposal.
Args:
proposal_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.Proposal, schemas.proposal.ma_schema,
data_dict)
def add_auto_proc(data_dict):
"""
Adds a auto_proc to db.
Args:
data_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(models.AutoProc, schemas.auto_proc.ma_schema,
data_dict)
def add_component_type(data_dict):
"""
Adds a component_type to db.
Args:
data_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(
models.ComponentType, schemas.component_type.ma_schema, data_dict
)
def add_data_collection(data_dict):
"""
Adds data collection item.
Args:
data_collection_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(
models.DataCollection, schemas.data_collection.ma_schema, data_dict
)
def add_beam_calendar(data_dict):
"""
Adds data collection item.
Args:
beam_calendar_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(
models.BeamCalendar, schemas.beam_calendar.ma_schema, data_dict
)
def add_crystal_size_distribution(data_dict):
"""Adds a new crystal size distribution.
Args:
data_dict ([type]): [description]
Returns:
int, dict: HTTP status code and response dict
"""
return db.add_db_item(
models.CrystalSizeDistribution,
schemas.crystal_size_distribution.ma_schema,
data_dict,
)
def add_auto_proc_program_message(data_dict):
"""
Adds a auto_proc_program_message to db.
Args:
data_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(
models.AutoProcProgramMessage,
schemas.auto_proc_program_message.ma_schema,
data_dict,
)
def add_auto_proc_program_attachment(data_dict):
"""
Adds a auto_proc_program_attachment to db.
Args:
data_dict ([type]): [description]
Returns:
[type]: [description]
"""
return db.add_db_item(
models.AutoProcProgramAttachment,
schemas.auto_proc_program_attachment.ma_schema,
data_dict,
)
def add_crystal_slurry(data_dict):
"""Adds a new crystal slurry item.
Args:
crystal_slurry_dict ([type]): [description]
Returns:
[type]: [description]
"""
status_code, result = ispyb_service_connector.get_ispyb_resource(
"pyispyb.core", "/samples/crystals/%d" % data_dict["crystalId"])
print(status_code, result)
if status_code == 200:
crystal_id = data_dict.get("crystalId")
if crystal_id is None:
abort(HTTPStatus.NO_CONTENT, "No crystalId in crystalSlurry dict")
else:
data_dict.pop("crystalId")
return db.add_db_item(models.CrystalSlurry,
schemas.crystal_slurry.ma_schema, data_dict)
else:
abort(status_code, result)
