def populate_data(count: int, db_cursor: pyodbc.Cursor):
''' Generate user data. '''
fake = Faker()
row = lambda n: (n + 1, fake.format('name'), fake.format('city'))
for i in range(count):
db_cursor.execute(SQL_INSERT_DATA, row(i))
def add_dart_plate_if_doesnt_exist(cursor: pyodbc.Cursor, plate_barcode: str,
biomek_labclass: str) -> str:
"""Adds a plate to DART if it does not already exist. Returns the state of the plate.
Arguments:
cursor {pyodbc.Cursor} -- The cursor with with to execute queries.
plate_barcode {str} -- The barcode of the plate to add.
biomek_labclass -- The biomek labware class of the plate.
Returns:
str -- The state of the plate in DART.
"""
state = get_dart_plate_state(cursor, plate_barcode)
if state == DART_STATE_NO_PLATE:
cursor.execute(SQL_DART_ADD_PLATE,
(plate_barcode, biomek_labclass, 96))
if set_dart_plate_state_pending(cursor, plate_barcode):
state = DART_STATE_PENDING
else:
raise DartStateError(
f"Unable to set the state of a DART plate {plate_barcode} to {DART_STATE_PENDING}"
)
elif state == DART_STATE_NO_PROP:
raise DartStateError(f"DART plate {plate_barcode} should have a state")
return state
def update_rows(
self,
*,
cur: pyodbc.Cursor,
table: domain_table.Table,
rows: domain_rows.Rows,
batch_size: int,
column_names: typing.Optional[typing.Set[str]] = None,
) -> None:
if column_names is None:
column_names = table.column_names
for batch in rows.batches(batch_size):
sql = self._sql_adapter.update_rows(
schema_name=table.schema_name,
table_name=table.table_name,
pk_cols=set(table.primary_key.columns),
column_names=column_names,
parameter_placeholder=parameter_placeholder,
)
pk_cols = sorted(set(table.primary_key.columns))
non_pk_cols = sorted(col for col in column_names
if col not in table.primary_key.columns)
unordered_params = batch.as_dicts()
param_order = non_pk_cols + pk_cols
ordered_params = [
tuple(row[k] for k in param_order) for row in unordered_params
]
cur.executemany(sql, ordered_params)
def readSQLScriptFromFile(scriptPath: str, cur: db.Cursor) -> []:
result = []
with open(scriptPath, 'r') as inp:
i = 0
sqlQuery = ''
for line in inp:
if line == 'GO\n':
i = i + 1
print(f'Query #{i}')
# print(sqlQuery)
cur.execute(sqlQuery)
try:
result.append(
pd.DataFrame.from_records(
cur.fetchall(),
columns=[x[0] for x in cur.description]))
except:
print('no results')
# print('****')
sqlQuery = ''
elif 'PRINT' in line:
disp = line.split("'")[1]
print(f'{disp}')
else:
sqlQuery = sqlQuery + line
inp.close()
return (result)
def get_chores_helper(cursor: pyodbc.Cursor, account_id: str) -> dict:
"""Helper function for GetChoresParent to get the chores given a parent account id."""
try:
cursor.execute(queries.get_chores_by_parent(), account_id)
except Exception as exc:
abort(500, str(exc))
return GetChoresResponseModel(cursor.fetchall()).get_response()
def select_movie_with_like(cursor: pyodbc.Cursor, slug: str):
query = "SELECT * FROM [dbo].[testTable] WHERE title like ?;"
cursor.execute(query, (f"%{slug}%"))
movies = cursor.fetchall()
for movie in movies:
print(movie)
def test_change_tracking_after_update(pg_cursor: pyodbc.Cursor) -> None:
src_db_adapter = adapter.PostgresAdapter()
dest_db_adapter = adapter.PostgresAdapter()
pg_cursor.execute("""
UPDATE sales.customer
SET customer_last_name = 'Smithers'
WHERE customer_first_name = 'Steve'
""")
pg_cursor.commit()
result = pg_cursor.execute("""
SELECT c.customer_last_name
FROM sales.customer AS c
WHERE c.customer_first_name = 'Steve'
""").fetchval()
assert result == "Smithers"
service.update_history_table(
src_cur=pg_cursor,
dest_cur=pg_cursor,
src_db_adapter=src_db_adapter,
dest_db_adapter=dest_db_adapter,
src_schema_name="sales",
src_table_name="customer",
compare_cols=None, # compare all columns
recreate=False,
)
check_history_table_in_sync(cur=pg_cursor)
pg_cursor.execute("""
UPDATE sales.customer
SET customer_last_name = 'Smalls'
WHERE customer_first_name = 'Steve'
""")
pg_cursor.commit()
service.update_history_table(
src_cur=pg_cursor,
dest_cur=pg_cursor,
src_db_adapter=src_db_adapter,
dest_db_adapter=dest_db_adapter,
src_schema_name="sales",
src_table_name="customer",
compare_cols=None, # compare all columns
recreate=False,
)
check_history_table_in_sync(cur=pg_cursor)
result = pg_cursor.execute("""
SELECT h.customer_last_name
FROM sales.customer_history AS h
WHERE
h.customer_first_name = 'Steve'
AND h.valid_to = '9999-12-31'
""").fetchall()
assert result is not None
assert len(result) == 1
assert result[0].customer_last_name == "Smalls"
def select_all_movie_year(cursor: pyodbc.Cursor, year: int):
# Crear consulta
query = "SELECT * FROM [dbo].[testTable] WHERE years > ?;"
# Hacer la peticion
cursor.execute(query, (year))
# Traemos todos los datos
movies = cursor.fetchall()
# imprimir los datos
for movie in movies:
print(movie)
def _execute(self, cursor: pyodbc.Cursor, query: str,
parameters: tuple) -> None:
try:
cursor.execute(query, parameters)
except pyodbc.OperationalError as e:
self._connect()
raise e
except Exception as e:
self._con.rollback()
raise e
def display_users(db_cursor: pyodbc.Cursor):
''' Displays users data. '''
db_cursor.execute('SELECT * FROM users')
transferred_data = db_cursor.fetchall()
template = '{:<5} {:<20} {:<10}'
print(template.format('ID', 'NAME', 'CITY'))
print('-' * 32)
for row in transferred_data:
print(template.format(row.id, row.name, row.city))
def create_table(self, *, cur: pyodbc.Cursor,
table: domain_table.Table) -> bool:
if self.table_exists(cur=cur,
table_name=table.table_name,
schema_name=table.schema_name):
return False
else:
sql = self._sql_adapter.table_definition(table)
cur.execute(sql)
logger.info(f"{table.schema_name}.{table.table_name} was created.")
return True
def transfer_data(source_db_cursor: pyodbc.Cursor, dest_db_cursor: pyodbc.Cursor, dest_db_conn: pyodbc.Connection):
''' Extracts users data from source database and stores them in destination database. '''
print('Extracting users data from source database.')
source_db_cursor.execute('SELECT * FROM users')
rows = source_db_cursor.fetchall()
print('Transferring users data to destination database.')
for row in rows:
dest_db_cursor.execute(SQL_INSERT_DATA, (row.id, row.name, row.city))
print(f'{len(rows)} rows transferred\n')
dest_db_conn.commit()
def set_dart_well_properties(cursor: pyodbc.Cursor, plate_barcode: str,
well_props: Dict[str,
str], well_index: int) -> None:
"""Calls the DART stored procedure to add or update properties on a well
Arguments:
cursor {pyodbc.Cursor} -- The cursor with which to execute queries.
plate_barcode {str} -- The barcode of the plate whose well properties to update.
well_props {Dict[str, str]} -- The names and values of the well properties to update.
well_index {int} -- The index of the well to update.
"""
for prop_name, prop_value in well_props.items():
params = (plate_barcode, prop_name, prop_value, well_index)
cursor.execute(SQL_DART_SET_WELL_PROPERTY, params)
def get_parent_id_for_child(cursor: pyodbc.Cursor, child_account_id: str) -> str:
"""Gets the corresponding parent id for a child's id."""
try:
cursor.execute(
queries.get_child_by_account_id(("ParentGoogleAccountId",)),
child_account_id,
)
except Exception as exc:
abort(400, str(exc))
child_res = cursor.fetchone()
if not child_res:
abort(404, "Child Account ID not found")
return child_res.ParentGoogleAccountId
def get_dart_plate_state(cursor: pyodbc.Cursor, plate_barcode: str) -> str:
"""Gets the state of a DART plate.
Arguments:
cursor {pyodbc.Cursor} -- The cursor with which to execute queries.
plate_barcode {str} -- The barcode of the plate whose state to fetch.
Returns:
str -- The state of the plate in DART.
"""
params = (plate_barcode, DART_STATE)
cursor.execute(SQL_DART_GET_PLATE_PROPERTY, params)
return str(cursor.fetchval())
def _executeUpdate(self, cursor: odbc.Cursor) -> None:
prop_sets = ""
prop_values = []
for prop in self.properties:
if prop.updated:
if prop_sets != "":
prop_sets += ","
prop_sets += "{0}=?".format(prop.name)
prop_values.append(prop.value)
if len(prop_values) > 0:
prop_values.append(self.primaryKey)
cursor.execute(
"UPDATE {0} SET {1} WHERE pk=?".format(self._tableName,
prop_sets), prop_values)
def tables(self, *, cur: pyodbc.Cursor) -> typing.Set[str]:
sql = "SHOW TABLES"
rows = cur.execute(sql=sql).fetchall()
if rows:
return {row[0] for row in rows}
else:
return set()
def test_postgres_adapter_fast_row_count(pg_cursor: pyodbc.Cursor) -> None:
stats_sql = """
SELECT
pc.reltuples
, tbl.n_live_tup
, tbl.n_dead_tup
, tbl.n_mod_since_analyze
, tbl.last_analyze
, tbl.last_autoanalyze
, tbl.last_vacuum
, tbl.last_autovacuum
, CASE WHEN tbl.last_analyze IS NULL AND tbl.last_autoanalyze IS NULL THEN 0 ELSE 1 END AS has_stats
FROM pg_catalog.pg_class AS pc
JOIN pg_stat_all_tables tbl
ON pc.oid = tbl.relid
WHERE
pc.relname = 'customer'
AND tbl.schemaname = 'sales'
"""
result = pg_cursor.execute(stats_sql).fetchall()
for row in result:
print(row)
db_adapter = adapter.PostgresAdapter()
rows = db_adapter.fast_row_count(cur=pg_cursor,
schema_name="sales",
table_name="customer")
assert rows == 9
def table_exists(
self,
*,
cur: pyodbc.Cursor,
table_name: str,
schema_name: typing.Optional[str] = None,
) -> bool:
if schema_name is None:
raise domain.exceptions.SchemaIsRequired(
f"A schema is required for PostgresPyodbcDbAdapter's table_exists method"
)
sql = self.__sql_adapter.table_exists(schema_name=schema_name,
table_name=table_name)
result = cur.execute(sql).fetchval()
if result:
if result == 0:
return False
elif result == 1:
return True
else:
raise domain.exceptions.InvalidSqlGenerated(
sql=sql,
message=
f"table_exists should return 0 for False, or 1 for True, but it returned {result!r}.",
)
return False
def delete_rows(
self,
*,
cur: pyodbc.Cursor,
table: domain_table.Table,
rows: domain_rows.Rows,
batch_size: int,
) -> None:
sql = self._sql_adapter.delete_rows(
schema_name=table.schema_name,
table_name=table.table_name,
pk_cols=set(table.primary_key.columns),
parameter_placeholder=parameter_placeholder,
row_cols=rows.column_names,
)
for batch in rows.batches(batch_size):
cur.executemany(sql, batch.as_tuples(sort_columns=False))
def drop_table(
self,
*,
cur: pyodbc.Cursor,
table_name: str,
schema_name: typing.Optional[str] = None,
) -> bool:
if self.table_exists(cur=cur,
table_name=table_name,
schema_name=schema_name):
sql = self._sql_adapter.drop_table(schema_name=schema_name,
table_name=table_name)
cur.execute(sql=sql, params=None)
logger.info(f"{schema_name}.{table_name} was dropped.")
return True
else:
return False
def set_dart_plate_state_pending(cursor: pyodbc.Cursor, plate_barcode: str) -> bool:
"""Sets the state of a DART plate to pending.
Arguments:
cursor {pyodbc.Cursor} -- The cursor with which to execute queries.
plate_barcode {str} -- The barcode of the plate whose state to set.
Returns:
bool -- Return True if DART was updated successfully, else False.
"""
params = (plate_barcode, DART_STATE, DART_STATE_PENDING)
cursor.execute(SQL_DART_SET_PLATE_PROPERTY, params)
# assuming that the stored procedure method returns an error code, convert it to an int to make sure
response = int(cursor.fetchval())
return response == DART_SET_PROP_STATUS_SUCCESS
def setup_table(cur: pyodbc.Cursor, data: List):
''' Create table and populate data. '''
print('Create a new table for users.')
cur.execute(SQL_CREATE_TABLE)
cur.commit()
print('Populate users data.')
for row in data:
cur.execute(SQL_INSERT_DATA, row)
cur.commit()
def add_rows(
self,
*,
cur: pyodbc.Cursor,
schema_name: typing.Optional[str],
table_name: str,
rows: domain_rows.Rows,
batch_size: int,
) -> None:
for batch in rows.batches(batch_size):
sql = self._sql_adapter.add_rows(
schema_name=schema_name,
table_name=table_name,
parameter_placeholder=parameter_placeholder,
rows=batch,
)
params = batch.as_tuples()
cur.executemany(sql, params)
def row_count(
self,
*,
cur: pyodbc.Cursor,
table_name: str,
schema_name: typing.Optional[str] = None,
) -> int:
sql = self._sql_adapter.row_count(schema_name=schema_name,
table_name=table_name)
return cur.execute(sql).fetchval()
def fetch_rows(
*,
cur: pyodbc.Cursor,
sql: str,
params: typing.Optional[typing.List[typing.Tuple[typing.Any, ...]]] = None,
) -> domain_rows.Rows:
std_sql = sql_formatter.standardize_sql(sql)
logger.debug(f"FETCH:\n\t{std_sql}\n\tparams={params}")
if params is None:
result = cur.execute(std_sql)
elif len(params) > 1:
result = cur.executemany(std_sql, params)
else:
result = cur.execute(std_sql, params[0])
column_names = [description[0] for description in cur.description]
if rows := result.fetchall():
return domain_rows.Rows(column_names=column_names,
rows=[tuple(row) for row in rows])
def check_customer2_table_in_sync(cur: pyodbc.Cursor) -> None:
sql = "SELECT COUNT(*) FROM sales.customer"
result = cur.execute(sql).fetchval()
assert result > 0
sql = "SELECT * FROM sales.customer"
result = cur.execute(sql).fetchall()
customer_values = {
tuple(zip((col[0] for col in cur.description), row))
for row in result
}
sql = "SELECT * FROM sales.customer2"
result = cur.execute(sql).fetchall()
customer2_values = {
tuple(zip((col[0] for col in cur.description), row))
for row in result
}
assert (
customer2_values == customer_values
), f"\ncustomer:\n{sorted(customer_values)}\n\ncustomer2:\n{sorted(customer2_values)}"
def table_exists(
self,
*,
cur: pyodbc.Cursor,
table_name: str,
schema_name: typing.Optional[str] = None,
) -> bool:
sql = self._sql_adapter.table_exists(schema_name=schema_name,
table_name=table_name)
result = cur.execute(sql).fetchval()
return True if result else False
def get_strategy_traders_id(cursor: pyodbc.Cursor, strategy_id) -> list:
# 获取pm_strategy_info （主要用于获取 Init Capital信息）
sql = f'''
SELECT [Id]
FROM [Platinum.PM].[dbo].[TraderDbo]
where strategyid = '{strategy_id}'
'''
l_traders_id = []
for row in cursor.execute(sql).fetchall():
l_traders_id.append(row[0])
return l_traders_id
def save_cursor_result_to_df(cursor: pyodbc.Cursor) -> pd.DataFrame:
"""Save the executed query cursor to a pandas DataFrame
:param cursor: query cursor
:type cursor: pyodbc.Cursor
:return: result Pandas DataFrame
:rtype: pd.DataFrame
"""
descriptions = cursor.description
col_names = [desc[0] for desc in descriptions]
df = pd.DataFrame.from_records(cursor.fetchall(), columns=col_names)
LOG.debug('saved cursor to DataFrame')
return df