Python ProtRelionBase._initialize Exemples

Exemple #1

Fichier : protocol_refine3d.py Projet : azazellochg/scipion

 def _initialize(self):
     """ This function is mean to be called after the 
     working dir for the protocol have been set. (maybe after recovery from mapper)
     """
     ProtRelionBase._initialize(self)
     self.ClassFnTemplate = "%(ref)03d@%(rootDir)s/relion_it%(iter)03d_classes.mrcs"
     self.numberOfClasses.set(1)  # For refinement we only need just one "class"

Exemple #2

 def _initialize(self):
     """ This function is mean to be called after the 
     working dir for the protocol have been set.
     (maybe after recovery from mapper)
     """
     ProtRelionBase._initialize(self)
     self.ClassFnTemplate = '%(ref)03d@%(rootDir)s/relion_it%(iter)03d_classes.mrcs'

Exemple #3

 def _initialize(self):
     """ This function is mean to be called after the 
     working dir for the protocol have been set.
     (maybe after recovery from mapper)
     """
     ProtRelionBase._initialize(self)

Exemple #4

Fichier : protocol_classify3d.py Projet : azazellochg/scipion

 def _initialize(self):
     """ This function is mean to be called after the 
     working dir for the protocol have been set. (maybe after recovery from mapper)
     """
     ProtRelionBase._initialize(self)

Exemple #5

Fichier : protocol_classify2d.py Projet : azazellochg/scipion

 def _initialize(self):
     """ This function is mean to be called after the 
     working dir for the protocol have been set. (maybe after recovery from mapper)
     """
     ProtRelionBase._initialize(self)
     self.ClassFnTemplate = '%(ref)03d@%(rootDir)s/relion_it%(iter)03d_classes.mrcs'