def launch_viewer(request):
project = loadProject(request)
objectId = request.GET.get('objectId')
# Fix this, now we should use newer notation: . instead of ::
if '::' in objectId:
idParts = objectId.split("::")
if idParts[1] != 'None':
# We use the logic in Pointer.get to handle the 'extended'
# parts that can come as part of the id (eg: 2::outputAverages::1)
protObj = project.getObject(int(idParts[0]))
pointer = Pointer(value=protObj)
pointer.setExtendedParts(idParts[1:])
obj = pointer.get()
else:
#
obj = project.getObject(int(idParts[0]))
else:
obj = project.getObject(int(objectId))
if obj is not None:
if obj.isPointer():
obj = obj.get()
viewers = findViewers(obj.getClassName(), WEB_DJANGO)
if len(viewers) == 0:
views = []
if isinstance(obj, EMProtocol):
for _, output in obj.iterOutputAttributes(EMObject):
objViewers = findViewers(output.getClassName(), WEB_DJANGO)
if objViewers:
views += objViewers[0](project=project)._visualize(output) or []
if not views:
views = [MessageView("No viewers found for object type: %s" % obj.getClassName())]
urls = [viewToUrl(request, view) for view in views]
else:
viewerClass = viewers[0]
viewer = viewerClass(project=project, protocol=obj)
# Lets assume if there is a viewer for the protocol
# it will be a ProtocolViewer with a Form
if issubclass(viewerClass, ProtocolViewer):
urls = [viewerForm(project, obj, viewer, request)]
else:
views = viewer._visualize(obj)
urls = [viewToUrl(request, v) for v in views]
else:
views = [MessageView("Object not found to visualize")]
urls = [viewToUrl(request, view) for view in views]
jsonStr = json.dumps(urls, ensure_ascii=False)
return HttpResponse(jsonStr, content_type='application/javascript')
def get_resmap_plot(request):
# LOAD Project
project = loadProject(request)
# Create protocol
newProtocol = project.newProtocol(ProtResMap)
# GET and SET Parameters
newAng = request.GET.get('ang')
newProtocol.prewhitenAng.set(float(newAng))
newRamp = request.GET.get('ramp')
newProtocol.prewhitenRamp.set(float(newRamp))
def setPointerValue(inputPointer, uniqueIdKey):
uniqueId = request.GET.get(uniqueIdKey)
parts = uniqueId.split('.')
inputPointer.set(project.mapper.selectById(parts[0]))
inputPointer.setExtendedParts(parts[1:])
useSplit = request.GET.get('useSplit', None) is not None
newProtocol.useSplitVolume.set(useSplit)
if not useSplit:
setPointerValue(newProtocol.inputVolume, 'inputId')
else:
setPointerValue(newProtocol.volumeHalf1, 'inputId')
setPointerValue(newProtocol.volumeHalf2, 'splitId')
useMask = request.GET.get('useMask', None) is not None
newProtocol.applyMask.set(useMask)
if useMask:
setPointerValue(newProtocol.maskVolume, 'maskId')
# Extra Params
pValue = request.GET.get('pValue', None)
if pValue is not None:
newProtocol.pVal.set(pValue)
minRes = request.GET.get('minRes', None)
if minRes is not None:
newProtocol.minRes.set(minRes)
maxRes = request.GET.get('maxRes', None)
if maxRes is not None:
newProtocol.maxRes.set(maxRes)
stepRes = request.GET.get('stepRes', None)
if stepRes is not None:
newProtocol.stepRes.set(stepRes)
plotUrl, _ = getPlotResMap(request, newProtocol)
return HttpResponse(plotUrl, content_type='application/javascript')
def get_resmap_plot(request):
# LOAD Project
projectName = request.session['projectName']
project = loadProject(request)
# Create protocol
newProtocol = project.newProtocol(ProtResMap)
# GET and SET Parameters
newAng = request.GET.get('ang')
newProtocol.prewhitenAng.set(float(newAng))
newRamp = request.GET.get('ramp')
newProtocol.prewhitenRamp.set(float(newRamp))
inputId = request.GET.get('inputId')
inputVolume = project.mapper.selectById(inputId)
newProtocol.inputVolume.set(inputVolume)
useSplit = request.GET.get('useSplit', None)
if useSplit is not None:
newProtocol.useSplitVolume = True
splitId = request.GET.get('splitId', None)
splitVolume = project.mapper.selectById(splitId)
newProtocol.splitVolume.set(splitVolume.get())
useMask = request.GET.get('useMask', None)
if useSplit is not None:
newProtocol.applyMask = True
maskId = request.GET.get('maskId', None)
inputMask = project.mapper.selectById(maskId)
newProtocol.maskVolume.set(inputMask.get())
# Extra Params
pValue = request.GET.get('pValue', None)
if pValue is not None:
newProtocol.pVal.set(float(pValue))
minRes = request.GET.get('minRes', None)
if minRes is not None:
newProtocol.minRes.set(float(minRes))
maxRes = request.GET.get('maxRes', None)
if maxRes is not None:
newProtocol.maxRes.set(float(maxRes))
stepRes = request.GET.get('stepRes', None)
if stepRes is not None:
newProtocol.stepRes.set(float(stepRes))
plotUrl, _ = getPlotResMap(request, newProtocol)
return HttpResponse(plotUrl, mimetype='application/javascript')
def get_resmap_plot(request):
# LOAD Project
projectName = request.session['projectName']
project = loadProject(request)
# Create protocol
newProtocol = project.newProtocol(ProtResMap)
# GET and SET Parameters
newAng = request.GET.get('ang')
newProtocol.prewhitenAng.set(float(newAng))
newRamp = request.GET.get('ramp')
newProtocol.prewhitenRamp.set(float(newRamp))
inputId = request.GET.get('inputId')
inputVolume = project.mapper.selectById(inputId)
newProtocol.inputVolume.set(inputVolume)
useSplit = request.GET.get('useSplit', None)
if useSplit is not None:
newProtocol.useSplitVolume = True
splitId = request.GET.get('splitId', None)
splitVolume = project.mapper.selectById(splitId)
newProtocol.splitVolume.set(splitVolume.get())
useMask = request.GET.get('useMask', None)
if useSplit is not None:
newProtocol.applyMask = True
maskId = request.GET.get('maskId', None)
inputMask = project.mapper.selectById(maskId)
newProtocol.maskVolume.set(inputMask.get())
# Extra Params
pValue = request.GET.get('pValue', None)
if pValue is not None:
newProtocol.pVal.set(float(pValue))
minRes = request.GET.get('minRes', None)
if minRes is not None:
newProtocol.minRes.set(float(minRes))
maxRes = request.GET.get('maxRes', None)
if maxRes is not None:
newProtocol.maxRes.set(float(maxRes))
stepRes = request.GET.get('stepRes', None)
if stepRes is not None:
newProtocol.stepRes.set(float(stepRes))
plotUrl, _ = getPlotResMap(request, newProtocol)
return HttpResponse(plotUrl, mimetype='application/javascript')