def test_dada2_stats_format_validate_positive(self):
filenames = [
'single-default-stats.tsv', 'single-override-stats.tsv',
'underscore-samples-stats.tsv', 'pyro-default-stats.tsv',
'paired-default-stats.tsv', 'paired-override-stats.tsv'
]
filepaths = [
self.get_data_path(os.path.join('expected', filename))
for filename in filenames
]
for filepath in filepaths:
format = DADA2StatsFormat(filepath, mode='r')
# Should pass without error
format.validate()
def _2(obj: qiime2.Metadata) -> DADA2StatsFormat:
ff = DADA2StatsFormat()
obj.save(str(ff))
return ff