class ProgressView(QWidget):
def __init__(self, parent=None) -> None:
super(ProgressView, self).__init__(parent)
self._progress_tree_view = QTreeView(self)
self._progress_tree_view.setHeaderHidden(True)
self._progress_tree_view.setItemsExpandable(False)
self._progress_tree_view.setItemDelegate(ProgressDelegate(self))
self._progress_tree_view.setRootIsDecorated(False)
self._progress_tree_view.setFixedHeight(30)
self._progress_tree_view.setVerticalScrollBarPolicy(
Qt.ScrollBarAlwaysOff)
self._progress_bar = QProgressBar(self)
self._progress_bar.setRange(0, 0)
self._progress_bar.setFixedHeight(30)
self._progress_bar.setVisible(False)
layout = QVBoxLayout(self)
layout.setContentsMargins(0, 0, 0, 0)
layout.addWidget(self._progress_tree_view)
layout.addWidget(self._progress_bar)
self.setLayout(layout)
self.setFixedHeight(30)
def setModel(self, model) -> None:
self._progress_tree_view.setModel(model)
@Slot(bool)
def setIndeterminate(self, b: bool) -> None:
if b:
self._progress_bar.setVisible(True)
self._progress_tree_view.setVisible(False)
else:
self._progress_bar.setVisible(False)
self._progress_tree_view.setVisible(True)
class HomeTab(WidgetBase):
"""Home applications tab."""
# name, prefix, sender
sig_item_selected = Signal(object, object, object)
# button_widget, sender
sig_channels_requested = Signal(object, object)
# application_name, command, prefix, leave_path_alone, sender
sig_launch_action_requested = Signal(object, object, bool, object, object)
# action, application_name, version, sender
sig_conda_action_requested = Signal(object, object, object, object)
# url
sig_url_clicked = Signal(object)
# TODO: Connect these signals to have more granularity
# [{'name': package_name, 'version': version}...], sender
sig_install_action_requested = Signal(object, object)
sig_remove_action_requested = Signal(object, object)
def __init__(self, parent=None):
"""Home applications tab."""
super(HomeTab, self).__init__(parent)
# Variables
self._parent = parent
self.api = AnacondaAPI()
self.applications = None
self.style_sheet = None
self.app_timers = None
self.current_prefix = None
# Widgets
self.list = ListWidgetApplication()
self.button_channels = ButtonHomeChannels('Channels')
self.button_refresh = ButtonHomeRefresh('Refresh')
self.combo = ComboHomeEnvironment()
self.frame_top = FrameTabHeader(self)
self.frame_body = FrameTabContent(self)
self.frame_bottom = FrameTabFooter(self)
self.label_home = LabelHome('Applications on')
self.label_status_action = QLabel('')
self.label_status = QLabel('')
self.progress_bar = QProgressBar()
self.first_widget = self.combo
# Widget setup
self.setObjectName('Tab')
self.progress_bar.setTextVisible(False)
self.list.setVerticalScrollBarPolicy(Qt.ScrollBarAlwaysOn)
# Layout
layout_top = QHBoxLayout()
layout_top.addWidget(self.label_home)
layout_top.addWidget(SpacerHorizontal())
layout_top.addWidget(self.combo)
layout_top.addWidget(SpacerHorizontal())
layout_top.addWidget(self.button_channels)
layout_top.addWidget(SpacerHorizontal())
layout_top.addStretch()
layout_top.addWidget(self.button_refresh)
self.frame_top.setLayout(layout_top)
layout_body = QVBoxLayout()
layout_body.addWidget(self.list)
self.frame_body.setLayout(layout_body)
layout_bottom = QHBoxLayout()
layout_bottom.addWidget(self.label_status_action)
layout_bottom.addWidget(SpacerHorizontal())
layout_bottom.addWidget(self.label_status)
layout_bottom.addStretch()
layout_bottom.addWidget(self.progress_bar)
self.frame_bottom.setLayout(layout_bottom)
layout = QVBoxLayout()
layout.addWidget(self.frame_top)
layout.addWidget(self.frame_body)
layout.addWidget(self.frame_bottom)
self.setLayout(layout)
# Signals
self.list.sig_conda_action_requested.connect(
self.sig_conda_action_requested)
self.list.sig_url_clicked.connect(self.sig_url_clicked)
self.list.sig_launch_action_requested.connect(
self.sig_launch_action_requested)
self.button_channels.clicked.connect(self.show_channels)
self.button_refresh.clicked.connect(self.refresh_cards)
self.progress_bar.setVisible(False)
# --- Setup methods
# -------------------------------------------------------------------------
def setup(self, conda_data):
"""Setup the tab content."""
conda_processed_info = conda_data.get('processed_info')
environments = conda_processed_info.get('__environments')
applications = conda_data.get('applications')
self.current_prefix = conda_processed_info.get('default_prefix')
self.set_environments(environments)
self.set_applications(applications)
def set_environments(self, environments):
"""Setup the environments list."""
# Disconnect to avoid triggering the signal when updating the content
try:
self.combo.currentIndexChanged.disconnect()
except TypeError:
pass
self.combo.clear()
for i, (env_prefix, env_name) in enumerate(environments.items()):
self.combo.addItem(env_name, env_prefix)
self.combo.setItemData(i, env_prefix, Qt.ToolTipRole)
index = 0
for i, (env_prefix, env_name) in enumerate(environments.items()):
if self.current_prefix == env_prefix:
index = i
break
self.combo.setCurrentIndex(index)
self.combo.currentIndexChanged.connect(self._item_selected)
def set_applications(self, applications):
"""Build the list of applications present in the current conda env."""
apps = self.api.process_apps(applications, prefix=self.current_prefix)
all_applications = []
installed_applications = []
not_installed_applications = []
# Check if some installed applications are not on the apps dict
# for example when the channel was removed.
linked_apps = self.api.conda_linked_apps_info(self.current_prefix)
missing_apps = [app for app in linked_apps if app not in apps]
for app in missing_apps:
apps[app] = linked_apps[app]
for app_name in sorted(list(apps.keys())):
app = apps[app_name]
item = ListItemApplication(name=app['name'],
description=app['description'],
versions=app['versions'],
command=app['command'],
image_path=app['image_path'],
prefix=self.current_prefix,
needs_license=app.get(
'needs_license', False))
if item.installed:
installed_applications.append(item)
else:
not_installed_applications.append(item)
all_applications = installed_applications + not_installed_applications
self.list.clear()
for i in all_applications:
self.list.addItem(i)
self.list.update_style_sheet(self.style_sheet)
self.set_widgets_enabled(True)
self.update_status()
# --- Other methods
# -------------------------------------------------------------------------
def current_environment(self):
"""Return the current selected environment."""
env_name = self.combo.currentText()
return self.api.conda_get_prefix_envname(env_name)
def refresh_cards(self):
"""Refresh application widgets.
List widget items sometimes are hidden on resize. This method tries
to compensate for that refreshing and repainting on user demand.
"""
self.list.update_style_sheet(self.style_sheet)
self.list.repaint()
for item in self.list.items():
if not item.widget.isVisible():
item.widget.repaint()
def show_channels(self):
"""Emit signal requesting the channels dialog editor."""
self.sig_channels_requested.emit(self.button_channels, C.TAB_HOME)
def update_list(self, name=None, version=None):
"""Update applications list."""
self.set_applications()
self.label_status.setVisible(False)
self.label_status_action.setVisible(False)
self.progress_bar.setVisible(False)
def update_versions(self, apps=None):
"""Update applications versions."""
self.items = []
for i in range(self.list.count()):
item = self.list.item(i)
self.items.append(item)
if isinstance(item, ListItemApplication):
name = item.name
meta = apps.get(name)
if meta:
versions = meta['versions']
version = self.api.get_dev_tool_version(item.path)
item.update_versions(version, versions)
# --- Common Helpers (# FIXME: factor out to common base widget)
# -------------------------------------------------------------------------
def _item_selected(self, index):
"""Notify that the item in combo (environment) changed."""
name = self.combo.itemText(index)
prefix = self.combo.itemData(index)
self.sig_item_selected.emit(name, prefix, C.TAB_HOME)
@property
def last_widget(self):
"""Return the last element of the list to be used in tab ordering."""
if self.list.items():
return self.list.items()[-1].widget
def ordered_widgets(self, next_widget=None):
"""Return a list of the ordered widgets."""
ordered_widgets = [
self.combo,
self.button_channels,
self.button_refresh,
]
ordered_widgets += self.list.ordered_widgets()
return ordered_widgets
def set_widgets_enabled(self, value):
"""Enable or disable widgets."""
self.combo.setEnabled(value)
self.button_channels.setEnabled(value)
self.button_refresh.setEnabled(value)
for item in self.list.items():
item.button_install.setEnabled(value)
item.button_options.setEnabled(value)
if value:
item.set_loading(not value)
def update_items(self):
"""Update status of items in list."""
if self.list:
for item in self.list.items():
item.update_status()
def update_status(self, action='', message='', value=None, max_value=None):
"""Update the application action status."""
# Elide if too big
width = QApplication.desktop().availableGeometry().width()
max_status_length = round(width * (2.0 / 3.0), 0)
msg_percent = 0.70
fm = self.label_status_action.fontMetrics()
action = fm.elidedText(action, Qt.ElideRight,
round(max_status_length * msg_percent, 0))
message = fm.elidedText(
message, Qt.ElideRight,
round(max_status_length * (1 - msg_percent), 0))
self.label_status_action.setText(action)
self.label_status.setText(message)
if max_value is None and value is None:
self.progress_bar.setVisible(False)
else:
self.progress_bar.setVisible(True)
self.progress_bar.setMaximum(max_value)
self.progress_bar.setValue(value)
def update_style_sheet(self, style_sheet=None):
"""Update custom CSS style sheet."""
if style_sheet is None:
self.style_sheet = load_style_sheet()
else:
self.style_sheet = style_sheet
self.list.update_style_sheet(style_sheet=self.style_sheet)
self.setStyleSheet(self.style_sheet)
class MainWindow(QMainWindow):
sig_logged_in = Signal()
sig_logged_out = Signal()
DOCS_URL = 'https://docs.continuum.io/anaconda/navigator'
VIDEOS_URL = "http://content.continuum.io/api/videos"
EVENTS_URL = "http://content.continuum.io/api/events"
WEBINARS_URL = "http://content.continuum.io/api/webinars"
def __init__(self, splash=None):
super(MainWindow, self).__init__()
self.tracker = None
self.splash = splash
# Anaconda API
self.api = AnacondaAPI()
self.busy = False
self.logged = False
self.username = ''
self._login_text = 'Sign in to Anaconda Cloud'
self.first_run = CONF.get('main', 'first_run')
self.application_update_version = None
# Widgets
self.frame_header = FrameHeader(self)
self.frame_body = FrameBody(self)
self.label_logo = LabelHeaderLogo('ANACONDA NAVIGATOR')
self.button_logged_text = ButtonLabelLogin('')
self.button_logged_username = ButtonLinkLogin('')
self.label_update_available = LabelHeaderUpdate('Update available!')
self.button_update_available = ButtonHeaderUpdate('Update')
self.button_login = ButtonLogin(self._login_text)
self.central_widget = QWidget()
self.statusbar = self.statusBar()
self.progressbar = QProgressBar()
self.stack = TabWidgetBody(self)
self.home_tab = HomeTab(parent=self)
self.environments_tab = EnvironmentsTab(parent=self)
self.learning_tab = CommunityTab(
parent=self,
tags=['webinar', 'documentation', 'video', 'training'],
content_urls=[self.VIDEOS_URL, self.WEBINARS_URL])
self.community_tab = CommunityTab(parent=self,
tags=['event', 'forum', 'social'],
content_urls=[self.EVENTS_URL])
# self.projects_tab = ProjectsTab(parent=self)
# Note: Icons are set in CSS
self.stack.addTab(self.home_tab, text='Home')
self.stack.addTab(self.environments_tab, text='Environments')
self.stack.addTab(self.learning_tab, text='Learning')
self.stack.addTab(self.community_tab, text='Community')
# self.stack.addTab(self.projects_tab, 'Projects')
# Widget setup
self.button_login.setDefault(True)
self.label_logo.setPixmap(QPixmap(images.ANACONDA_NAVIGATOR_LOGO))
self.setWindowTitle("Anaconda Navigator")
self.statusbar.addPermanentWidget(self.progressbar)
self.progressbar.setVisible(False)
# Layout
header_layout = QHBoxLayout()
header_layout.addWidget(self.label_logo)
header_layout.addSpacing(18)
header_layout.addWidget(self.label_update_available, 0, Qt.AlignCenter)
header_layout.addWidget(self.button_update_available, 0,
Qt.AlignCenter)
header_layout.addStretch()
header_layout.addWidget(self.button_logged_text, 0, Qt.AlignTrailing)
header_layout.addWidget(self.button_logged_username, 0,
Qt.AlignTrailing)
header_layout.addWidget(self.button_login, 0, Qt.AlignTrailing)
header_layout.setContentsMargins(0, 0, 0, 0)
self.frame_header.setLayout(header_layout)
body_layout = QHBoxLayout()
body_layout.addWidget(self.stack)
body_layout.setContentsMargins(0, 0, 0, 0)
self.frame_body.setLayout(body_layout)
main_layout = QVBoxLayout()
main_layout.addWidget(self.frame_header)
main_layout.addWidget(self.frame_body)
main_layout.setContentsMargins(0, 0, 0, 0)
main_layout.setSpacing(0)
self.central_widget.setLayout(main_layout)
self.setContentsMargins(0, 0, 0, 0)
self.setCentralWidget(self.central_widget)
# Signals
self.button_login.clicked.connect(self.login)
self.button_logged_username.clicked.connect(self.open_login_page)
self.button_update_available.clicked.connect(self.update_application)
self.stack.currentChanged.connect(self._track_tab)
# This needs to be reworked!
# self.projects_tab.sig_apps_updated.connect(
# self.home_tab.set_applications)
# self.projects_tab.sig_apps_changed.connect(
# self.home_tab.set_applications)
# self.projects_tab.sig_project_updated.connect(
# self.home_tab.set_applications)
# self.projects_tab.sig_status_updated.connect(self.update_status_bar)
# Setup
self.api.set_data_directory(CHANNELS_PATH)
self.update_style_sheet()
# Helpers
# -------------------------------------------------------------------------
def _track_tab(self, index=None):
"""
Tracks the active tab by index, or set `Home` when no index has been
provided.
"""
if index is None:
index = self.stack.currentIndex()
text = self.stack.currentText().lower()
if self.tracker:
page = '/{0}'.format(text)
self.tracker.track_page(page)
def _metadata_updated(self, worker, path, error):
self.set_splash('Updating repodata...')
if error:
logger.error(str(error))
if path and os.path.isfile(path):
with open(path, 'r') as f:
data = f.read()
try:
self._metadata = json.loads(data)
except Exception:
self._metadata = {}
channels = CONF.get('main', 'conda_channels', default=tuple())
if not channels:
channels = self.api.conda_get_condarc_channels()
CONF.set('main', 'conda_channels', channels)
CONF.set('main', 'conda_active_channels', channels)
self.api.update_repodata(channels=channels)
self.api.sig_repodata_updated.connect(self._repodata_updated)
def _repodata_updated(self, paths):
self.set_splash('Loading repodata...')
self.api.sig_repodata_updated.disconnect(self._repodata_updated)
if self.first_run:
self.set_splash('Initial configuration...')
self.api.create_default_project()
worker = self.api.client_load_repodata(paths, self._metadata)
worker.sig_finished.connect(self.create_application_projects)
# --- Public API
# -------------------------------------------------------------------------
def setup(self):
"""
Perform initial setup and configuration.
"""
self.set_splash('Updating metadata...')
user = self.api.client_set_domain()
self.update_login_status(user)
self.setup_toolbars()
self.set_application_icon()
worker = self.api.update_metadata()
worker.sig_finished.connect(self._metadata_updated)
statusbar = self.statusBar()
statusbar.setVisible(False)
statusbar.setMaximumHeight(0)
statusbar.hide()
def create_application_projects(self, worker, output, error):
if error:
logger.error(str(error))
packages, apps = output
self.api.create_application_projects(
apps,
add_project=self.first_run,
)
self.post_setup(apps)
self.check_for_updates(packages)
def post_setup(self, apps):
CONF.set('main', 'first_run', False)
self.set_splash('Loading applications...')
self.home_tab.setup_tab(apps)
# self.set_splash('Loading projects...')
# self.projects_tab.setup_tab()
self.set_splash('Loading environments...')
self.environments_tab.setup_tab(metadata=self._metadata)
self.set_splash('Loading content...')
self.community_tab.setup_tab()
self.set_splash('Loading content...')
self.learning_tab.setup_tab()
self.update_style_sheet()
self.showMaximized()
self.post_visible_setup()
def set_application_icon(self):
"""
"""
app = QCoreApplication.instance()
app_icon = QIcon()
app_icon.addFile(images.ANACONDA_ICON_16_PATH, QSize(16, 16))
app_icon.addFile(images.ANACONDA_ICON_24_PATH, QSize(24, 24))
app_icon.addFile(images.ANACONDA_ICON_32_PATH, QSize(32, 32))
app_icon.addFile(images.ANACONDA_ICON_48_PATH, QSize(48, 48))
app_icon.addFile(images.ANACONDA_ICON_256_PATH, QSize(256, 256))
app.setWindowIcon(app_icon)
def setup_toolbars(self):
menubar = self.menuBar()
file_menu = menubar.addMenu('&File')
file_menu.addAction(
create_action(self,
"&Preferences",
triggered=self.show_preferences,
shortcut="Ctrl+P"))
file_menu.addAction(
create_action(self,
"&Quit",
triggered=self.close,
shortcut="Ctrl+Q"))
helpmenu = menubar.addMenu('&Help')
helpmenu.addAction(
create_action(self,
"&Online Documentation",
triggered=lambda: self.open_url(self.DOCS_URL)))
helpmenu.addAction(
create_action(self,
"&Logs viewer",
triggered=self.show_log_viewer,
shortcut="F6"))
helpmenu.addSeparator()
helpmenu.addAction(
create_action(self, "&About", triggered=self.show_about))
def post_visible_setup(self):
if self.splash:
self.splash.hide()
CONF.set('main', 'first_run', False)
# Start the tracker only after post_visible_setup
self.tracker = GATracker()
self._track_tab(0) # Start tracking home
self.fix_tab_ordering()
self.show_welcome_screen()
def check_for_updates(self, packages=None):
# Check if there is an update for navigator!
version = self.api.conda_package_version(name='root',
pkg='anaconda-navigator')
# Temporal mock test
# mock_versions = [version, '1.1.0']
# packages['anaconda-navigator'] = {'versions': mock_versions}
self.button_update_available.setVisible(False)
self.label_update_available.setVisible(False)
text = ''
if packages:
package_data = packages.get('anaconda-navigator')
if package_data:
versions = package_data.get('versions')
if versions and version != versions[-1]:
self.application_update_version = versions[-1]
self.label_update_available.setText(text)
self.label_update_available.setVisible(True)
self.button_update_available.setVisible(True)
def fix_tab_ordering(self):
return
for tab in [self.community_tab, self.learning_tab]:
self.setTabOrder(self.stack.tabbar.buttons[-1],
tab.filter_widgets[0])
for i in range(len(tab.filter_widgets) - 1):
self.setTabOrder(tab.filter_widgets[i],
tab.filter_widgets[i + 1])
self.setTabOrder(tab.filter_widgets[-1], tab.text_filter)
self.setTabOrder(tab.text_filter.button_icon, tab.list)
self.setTabOrder(tab.list, self.button_login)
# self.button_login.setFocus()
self.setTabOrder(self.stack.tabbar.buttons[-1],
self.environments_tab.text_search)
self.environments_tab.packages_widget.table_last_row.add_focus_widget(
self.button_login)
self.setTabOrder(self.environments_tab.packages_widget.table_last_row,
self.button_login)
def update_style_sheet(self):
style_sheet = load_style_sheet()
# self.home_tab.update_style_sheet(style_sheet)
self.environments_tab.update_style_sheet(style_sheet)
# self.community_tab.update_style_sheet(style_sheet)
# self.learning_tab.update_style_sheet(style_sheet)
self.setStyleSheet(style_sheet)
def set_splash(self, message):
"""
Set splash message.
"""
if self.splash:
self.splash.show_message(message)
QApplication.processEvents()
# --- Login
# -------------------------------------------------------------------------
def update_login_status(self, user_data=None):
"""
Update login button and information.
"""
if user_data:
self.username = user_data.get('login', '')
self.logged = True
if self.logged:
username = self.username
anaconda_api_url = CONF.get('main', 'anaconda_api_url')
token = self.api.client_load_token(anaconda_api_url)
self.button_logged_text.setText('Signed in as')
self.button_logged_username.setText(username)
url = "{0}/{1}".format(CONF.get('main', 'conda_url'), username)
self.button_logged_username.setToolTip(url)
self.button_login.setText('Sign out')
self.environments_tab.packages_widget.set_token(token)
else:
self.button_logged_text.setText('')
self.button_logged_username.setText('')
self.button_login.setText(self._login_text)
QApplication.restoreOverrideCursor()
def login(self):
"""
Open up login dialog or log out depending on logged status.
"""
if self.logged:
QApplication.setOverrideCursor(Qt.WaitCursor)
self.api.client_logout()
self.api.client_remove_token()
self.logged = False
self.sig_logged_out.emit()
self.tracker.track_event('authenticate',
'logout',
label=self.username)
else:
dlg = AuthenticationDialog(self.api, parent=self)
if self.tracker:
self.tracker.track_page('/login', pagetitle='Login dialog')
if dlg.exec_():
self.api.client_store_token(dlg.token)
self.username = dlg.username
self.logged = True
self.sig_logged_in.emit()
if self.tracker:
self.tracker.track_event('authenticate',
'login',
label=self.username)
self._track_tab()
self.update_login_status()
logger.debug(str((self.logged, self.username)))
# --- Dialogs
# -------------------------------------------------------------------------
def show_preferences(self):
"""
Display the preferences dialog and apply the needed actions.
"""
dlg = PreferencesDialog(self)
self.tracker.track_page('/preferences', pagetitle='Preferences dialog')
set_domains = self.environments_tab.packages_widget.update_domains
set_domains = self.environments_tab.packages_widget.update_domains
dlg.sig_urls_updated.connect(set_domains)
dlg.sig_urls_updated.connect(lambda au, cu: self.login())
dlg.exec_()
self._track_tab()
def show_about(self):
"""
Display the `About` dialog with information on the project.
"""
dlg = AboutDialog(self)
self.tracker.track_page('/about', pagetitle='About dialog')
dlg.exec_()
self._track_tab()
def show_log_viewer(self):
"""
Display the logs viewer to the user
"""
dlg = LogViewerDialog()
self.tracker.track_page('/logs', pagetitle='Log Viewer Dialog')
dlg.exec_()
self._track_tab()
def show_welcome_screen(self):
if getattr(self, 'showme', True) and CONF.get('main', 'show_startup',
True):
from anaconda_navigator.widgets.splash import FirstSplash
self.showme = False
self.splash.hide()
dlg = FirstSplash()
dlg.raise_()
dlg.exec_()
# --- Update Navigator
# -------------------------------------------------------------------------
def _update_application(self, worker, output, error):
self.button_update_available.setDisabled(False)
if error:
text = 'Anaconda Navigator Update error:'
dlg = MessageBoxError(text=text,
error=error,
title='Application Update Error')
self.tracker.track_page('/update/error',
pagetitle='Update Application Error '
'Message Box')
dlg.exec_()
else:
text = ('Anaconda Navigator Updated succefully.\n\n'
'Please restart the application')
dlg = MessageBoxInformation(text=text, title='Application Update')
self.tracker.track_page('/update/successful',
pagetitle='Application Update Succesful '
'Message Box')
dlg.exec_()
self._track_tab()
def update_application(self):
version = self.application_update_version
if version:
dlg = DialogUpdateApplication(version=version)
self.tracker.track_page('/update',
pagetitle='Update Application Dialog')
reply = dlg.exec_()
if reply:
self.tracker.track_event('application', 'updated', version)
self.busy = True
pkg = 'anaconda-navigator={}'.format(version)
worker = self.api.conda_install(name='root', pkgs=[pkg])
worker.sig_finished.connect(self._update_application)
self.button_update_available.setDisabled(True)
self._track_tab()
def update_status_bar(self, message='', timeout=0, val=-1, max_val=-1):
""" """
statusbar = self.statusBar()
if val != -1 and max_val != -1:
self.progressbar.setVisible(True)
self.progressbar.setValue(val)
self.progressbar.setMaximum(max_val)
else:
self.progressbar.setVisible(False)
if message:
statusbar.showMessage(message, timeout)
else:
statusbar.clearMessage()
statusbar.setVisible(False)
statusbar.setMaximumHeight(0)
statusbar.hide()
# --- Url handling
# -------------------------------------------------------------------------
def open_url(self, url):
qurl = QUrl(url)
QDesktopServices.openUrl(qurl)
self.tracker.track_event('help', 'documentation', url)
def open_login_page(self):
"""
"""
conda_url = CONF.get('main', 'conda_url')
url = "{0}/{1}".format(conda_url, self.username)
qurl = QUrl(url)
QDesktopServices.openUrl(qurl)
self.tracker.track_event('content', 'clicked', url)
# --- Qt methods
# -------------------------------------------------------------------------
def closeEvent(self, event):
"""
Catch close event.
"""
# TODO: check if an update is not in progress or things might break!!
# if self.busy:
show_dialog = not CONF.get('main', 'hide_quit_dialog')
if show_dialog:
if self.tracker:
self.tracker.track_page('/quit', pagetitle='Quit dialog')
dlg = QuitApplicationDialog()
reply = dlg.exec_()
if not reply:
event.ignore()
self._track_tab()
def keyPressEvent(self, event):
"""
Qt override.
"""
# if event.key() in [Qt.Key_F5]:
# self.update_style_sheet()
super(MainWindow, self).keyPressEvent(event)
def paintEvent(self, event):
"""
Qt override.
Draw lower left border of the main Stacked Widget.
"""
super(MainWindow, self).paintEvent(event)
tab = self.stack.tabbar
tab_pos = self.mapTo(self, tab.pos())
pane_pos = self.mapTo(self, self.stack.pos())
stack_height = self.stack.height()
menu_height = self.menuBar().height()
header_height = 49 # From css
padding = 20 # From css
left = 1 # From css
extra = 8 # Still wondering where this extra Y delta is
deltay = menu_height + header_height + tab.height() + padding + extra
x0 = tab_pos.x() + tab.width() + padding - left
y0 = tab_pos.y() + deltay
y1 = pane_pos.y() + stack_height + deltay - tab.height() - padding
painter = QPainter(self)
painter.setPen(QPen(QColor('#006f43'), 1, Qt.SolidLine, Qt.RoundCap))
painter.drawLine(x0, y0, x0, y1)
class MainWindow(QMainWindow):
def __init__(self, title):
super().__init__()
self.setWindowTitle(title)
self.lib_path = ""
self.final_title = ""
analysis_icon = QIcon(os.path.join(icons_dir, "icon.png"))
stack_icon = QIcon(os.path.join(icons_dir, "icon_stack.png"))
self.analysis_button = QToolButton(self)
self.analysis_button.setToolButtonStyle(Qt.ToolButtonTextUnderIcon)
self.analysis_button.setIcon(analysis_icon)
# TODO use more general solution for text wrapping
self.analysis_button.setText(SEGMENTATION_NAME.replace(" ", "\n"))
self.analysis_button.setIconSize(QSize(100, 100))
self.mask_button = QToolButton(self)
self.mask_button.setToolButtonStyle(Qt.ToolButtonTextUnderIcon)
self.mask_button.setIcon(stack_icon)
self.mask_button.setText(MASK_NAME.replace(" ", "\n"))
self.mask_button.setIconSize(QSize(100, 100))
self.analysis_button.clicked.connect(self.launch_analysis)
self.mask_button.clicked.connect(self.launch_mask)
self.progress = QProgressBar()
self.progress.setHidden(True)
layout = QGridLayout()
layout.addWidget(self.progress, 0, 0, 1, 2)
layout.addWidget(self.analysis_button, 1, 1)
layout.addWidget(self.mask_button, 1, 0)
widget = QWidget()
widget.setLayout(layout)
self.setCentralWidget(widget)
self.setWindowIcon(analysis_icon)
self.prepare = None
self.wind = None
def _launch_begin(self):
self.progress.setVisible(True)
self.progress.setRange(0, 0)
self.analysis_button.setDisabled(True)
self.mask_button.setDisabled(True)
import_config()
def launch_analysis(self):
self._launch_begin()
self.lib_path = "PartSeg.segmentation_analysis.main_window"
self.final_title = "PartSeg Segmentation Analysis"
self.prepare = Prepare(self.lib_path)
self.prepare.finished.connect(self.launch)
self.prepare.start()
def launch_mask(self):
self._launch_begin()
self.lib_path = "PartSeg.segmentation_mask.main_window"
self.final_title = "PartSeg Mask Segmentation"
self.prepare = Prepare(self.lib_path)
self.prepare.finished.connect(self.launch)
self.prepare.start()
def window_shown(self):
self.close()
def launch(self):
if self.prepare.result is None:
self.close()
return
if self.prepare.errors:
errors_message = QMessageBox()
errors_message.setText("There are errors during start")
errors_message.setInformativeText(
"During load saved state some of data could not be load properly\n"
"The files has prepared backup copies in state directory (Help > State directory)"
)
errors_message.setStandardButtons(QMessageBox.Ok)
text = "\n".join(["File: " + x[0] + "\n" + str(x[1]) for x in self.prepare.errors])
errors_message.setDetailedText(text)
errors_message.exec()
wind = self.prepare.result(title=self.final_title, signal_fun=self.window_shown)
wind.show()
self.wind = wind
class MainWindow(QMainWindow):
def __init__(self, title):
super().__init__()
self.setWindowTitle(title)
self.lib_path = ""
self.final_title = ""
analysis_icon = QIcon(os.path.join(icons_dir, "icon.png"))
stack_icon = QIcon(os.path.join(icons_dir, "icon_stack.png"))
self.analysis_button = QToolButton(self)
self.analysis_button.setToolButtonStyle(Qt.ToolButtonTextUnderIcon)
self.analysis_button.setIcon(analysis_icon)
# TODO use more general solution for text wrapping
self.analysis_button.setText(ANALYSIS_NAME.replace(" ", "\n"))
self.analysis_button.setIconSize(QSize(100, 100))
self.mask_button = QToolButton(self)
self.mask_button.setToolButtonStyle(Qt.ToolButtonTextUnderIcon)
self.mask_button.setIcon(stack_icon)
self.mask_button.setText(MASK_NAME.replace(" ", "\n"))
self.mask_button.setIconSize(QSize(100, 100))
self.analysis_button.clicked.connect(self.launch_analysis)
self.mask_button.clicked.connect(self.launch_mask)
self.progress = QProgressBar()
self.progress.setHidden(True)
layout = QGridLayout()
layout.addWidget(self.progress, 0, 0, 1, 2)
layout.addWidget(self.analysis_button, 1, 1)
layout.addWidget(self.mask_button, 1, 0)
widget = QWidget()
widget.setLayout(layout)
self.setCentralWidget(widget)
self.setWindowIcon(analysis_icon)
self.prepare = None
self.wind = None
self._update_theme()
def _update_theme(self):
napari_settings = napari_get_settings(state_store.save_folder)
with warnings.catch_warnings():
warnings.simplefilter("ignore", FutureWarning)
theme = get_theme(napari_settings.appearance.theme)
# TODO understand qss overwrite mechanism
self.setStyleSheet(napari_template(get_stylesheet(), **theme))
def _launch_begin(self):
self.progress.setVisible(True)
self.progress.setRange(0, 0)
self.analysis_button.setDisabled(True)
self.mask_button.setDisabled(True)
import_config()
def launch_analysis(self):
self._launch_begin()
self._launch_analysis()
self.prepare.start()
def _launch_analysis(self):
self.lib_path = "PartSeg._roi_analysis.main_window"
self.final_title = f"{APP_NAME} {ANALYSIS_NAME}"
self.prepare = Prepare(self.lib_path)
self.prepare.finished.connect(self.launch)
def launch_mask(self):
self._launch_begin()
self._launch_mask()
self.prepare.start()
def _launch_mask(self):
self.lib_path = "PartSeg._roi_mask.main_window"
self.final_title = f"{APP_NAME} {MASK_NAME}"
self.prepare = Prepare(self.lib_path)
self.prepare.finished.connect(self.launch)
def window_shown(self):
self.close()
def launch(self):
if self.prepare.result is None:
self.close()
return
if self.prepare.errors:
errors_message = QMessageBox()
errors_message.setText("There are errors during start")
errors_message.setInformativeText(
"During load saved state some of data could not be load properly\n"
"The files has prepared backup copies in state directory (Help > State directory)"
)
errors_message.setStandardButtons(QMessageBox.Ok)
text = "\n".join("File: " + x[0] + "\n" + str(x[1])
for x in self.prepare.errors)
errors_message.setDetailedText(text)
errors_message.exec_()
wind = self.prepare.result(title=self.final_title,
signal_fun=self.window_shown)
wind.show()
self.wind = wind
class DialogChannels(DialogBase):
"""Dialog to add delete and select active conda package channels."""
sig_channels_updated = Signal(object, object) # added, removed
sig_setup_ready = Signal()
sig_check_ready = Signal()
WIDTH = 550
def __init__(self, parent=None):
"""Dialog to add delete and select active conda pacakge channels ."""
super(DialogChannels, self).__init__(parent)
self._parent = parent
self._conda_url = 'https://conda.anaconda.org'
self.api = AnacondaAPI()
self.initial_sources = None
self.config_sources = None
self.style_sheet = None
self._setup_ready = False
self._conda_url_setup_ready = False
# Widgets
self.list = ListWidgetChannels(parent=self, api=self.api)
self.label_info = LabelBase(
'Manage channels you want Navigator to include.')
self.label_status = LabelBase('Collecting sources...')
self.progress_bar = QProgressBar(self)
self.button_add = ButtonNormal('Add...')
self.button_cancel = ButtonNormal('Cancel')
self.button_ok = ButtonPrimary('Update channels')
# Widget setup
self.frame_title_bar.setVisible(False)
self.list.setFrameStyle(QFrame.NoFrame)
self.list.setFrameShape(QFrame.NoFrame)
self.setWindowFlags(self.windowFlags() | Qt.Popup)
self.setWindowOpacity(0.96)
self.setMinimumHeight(300)
self.setMinimumWidth(self.WIDTH)
self.setModal(True)
# Layout
layout_button = QHBoxLayout()
layout_button.addWidget(self.label_info)
layout_button.addStretch()
layout_button.addWidget(self.button_add)
layout_ok = QHBoxLayout()
layout_ok.addWidget(self.label_status)
layout_ok.addWidget(SpacerHorizontal())
layout_ok.addWidget(self.progress_bar)
layout_ok.addWidget(SpacerHorizontal())
layout_ok.addStretch()
layout_ok.addWidget(self.button_cancel)
layout_ok.addWidget(SpacerHorizontal())
layout_ok.addWidget(self.button_ok)
layout = QVBoxLayout()
layout.addLayout(layout_button)
layout.addWidget(SpacerVertical())
layout.addWidget(self.list)
layout.addWidget(SpacerVertical())
layout.addWidget(SpacerVertical())
layout.addLayout(layout_ok)
self.setLayout(layout)
# Signals
self.button_add.clicked.connect(self.add_channel)
self.button_ok.clicked.connect(self.update_channels)
self.button_cancel.clicked.connect(self.reject)
self.list.sig_status_updated.connect(self.update_status)
self.list.sig_channel_added.connect(
lambda v=None: self.set_tab_order())
self.list.sig_channel_added.connect(
lambda v=None: self.button_ok.setFocus())
self.list.sig_channel_removed.connect(
lambda v=None: self.set_tab_order())
self.list.sig_channel_removed.connect(
lambda v=None: self.button_ok.setFocus())
self.list.sig_channel_checked.connect(self.sig_check_ready)
self.list.sig_channel_status.connect(self.refresh)
self.button_add.setDisabled(True)
self.button_ok.setDisabled(True)
self.button_cancel.setDisabled(True)
self.update_status(action='Collecting sources...',
value=0,
max_value=0)
@staticmethod
def _group_sources_and_channels(sources):
"""
Flatten sources and channels dictionary to list of tuples.
[(source, channel), (source, channel)...]
"""
grouped = []
for source, channels in sources.items():
for channel in channels:
grouped.append((source, channel))
return grouped
def keyPressEvent(self, event):
"""Override Qt method."""
key = event.key()
if key in [Qt.Key_Escape]:
if self.list.is_editing:
self.refresh()
self.list.is_editing = False
else:
self.reject()
# --- Public API
# -------------------------------------------------------------------------
def update_style_sheet(self, style_sheet=None):
"""Update custom css style sheets."""
if style_sheet is None:
self.style_sheet = load_style_sheet()
else:
self.style_sheet = style_sheet
self.setStyleSheet(self.style_sheet)
self.setMinimumWidth(SASS_VARIABLES.WIDGET_CHANNEL_DIALOG_WIDTH)
try:
self.list.update_style_sheet(style_sheet)
except Exception:
pass
def update_api(self, worker, api_info, error):
"""Update api info."""
self._conda_url = api_info.get('conda_url',
'https://conda.anaconda.org')
self._conda_url_setup_ready = True
if self._setup_ready:
self.sig_setup_ready.emit()
def setup(self, worker, conda_config_data, error):
"""Setup the channels widget."""
self.config_sources = conda_config_data.get('config_sources')
self.button_add.setDisabled(False)
for source, data in self.config_sources.items():
channels = data.get('channels', [])
for channel in channels:
item = ListWidgetItemChannel(channel=channel, location=source)
item.set_editable(False)
self.list.addItem(item)
self.set_tab_order()
self.button_add.setFocus()
self.button_ok.setDefault(True)
self.button_cancel.setEnabled(True)
self.initial_sources = self.list.sources.copy()
self.update_status()
self._setup_ready = True
if self._conda_url_setup_ready:
self.sig_setup_ready.emit()
def set_tab_order(self):
"""Fix the tab ordering in the list."""
if self.list._items:
self.setTabOrder(self.button_add,
self.list._items[0].button_remove)
self.setTabOrder(self.list._items[-1].button_remove,
self.button_cancel)
self.setTabOrder(self.button_cancel, self.button_ok)
self.refresh()
def add_channel(self):
"""Add new conda channel."""
user_rc_path = self.api._conda_api.user_rc_path
item = ListWidgetItemChannel(channel='', location=user_rc_path)
self.list.addItem(item)
self.refresh(False)
def update_channels(self):
"""Update channels list and status."""
sources = self.list.sources
original = self._group_sources_and_channels(self.initial_sources)
updated = self._group_sources_and_channels(sources)
if sorted(original) != sorted(updated):
self.sig_channels_updated.emit(*self.sources)
self.accept()
else:
self.reject()
def refresh(self, channel_status=True):
"""Update enable/disable status based on item count."""
self.button_add.setEnabled(channel_status and bool(self.list.count))
self.button_ok.setEnabled(channel_status)
self.button_cancel.setEnabled(True)
if self.list.count() == 0:
self.button_add.setEnabled(True)
self.button_ok.setEnabled(False)
def update_status(self, action='', message='', value=None, max_value=None):
"""Update the status and progress bar of the widget."""
visible = bool(action)
self.label_status.setText(action)
self.label_status.setVisible(visible)
if value is not None and max_value is not None:
self.progress_bar.setVisible(True)
self.progress_bar.setRange(0, max_value)
self.progress_bar.setValue(value)
else:
self.progress_bar.setVisible(False)
@property
def sources(self):
"""Return sources to add and remove from config."""
original = self._group_sources_and_channels(self.initial_sources)
updated = self._group_sources_and_channels(self.list.sources)
original = set(original)
updated = set(updated)
add = updated - original
remove = original - updated
return add, remove
class MainDialog(DialogBase):
"""Main dialog for the anaconda navgator updater."""
# Signals
sig_application_updated = Signal()
sig_ready = Signal()
# Class variables
PACKAGE = 'anaconda-navigator'
WIDTH = 450
HEIGHT = 200
def __init__(self, latest_version=None, prefix=None):
"""Main dialog for the anaconda navgator updater."""
super(MainDialog, self).__init__()
# Variables
self.api = CondaAPI()
self.prefix = prefix or os.environ.get('CONDA_PREFIX',
self.api.ROOT_PREFIX)
self.info = {}
self.first_run = True
self.setup_ready = False
self.busy = False
self.up_to_date = False
self.error = False
self.success = False
self.status = ''
self.current_version = None
self.latest_version = latest_version
self.style_sheet = load_style_sheet()
self.timer = QTimer()
self.timer_2 = QTimer()
self._windows_appusermodelid = None
# Widgets
self.message_box = None # For testing
self.label_icon = QSvgWidget()
self.label_message = LabelBase(
"There's a new version of Anaconda Navigator available. "
"We strongly recommend you to update.")
self.label_status = LabelBase('')
self.progress_bar = QProgressBar()
self.button_cancel = ButtonNormal('Dismiss')
self.button_update = ButtonPrimary('Update now')
self.button_launch = ButtonPrimary('Launch Navigator')
# Widgets setup
if WIN:
self._windows_appusermodelid = set_windows_appusermodelid()
self.setMinimumSize(self.WIDTH, self.HEIGHT)
self.label_message.setAlignment(Qt.AlignLeft | Qt.AlignTop)
self.label_message.setWordWrap(True)
self.label_status.setWordWrap(True)
self.button_update.setAutoDefault(True)
self.button_launch.setAutoDefault(True)
self.button_cancel.setFocusPolicy(Qt.NoFocus)
self.timer.setInterval(1000)
self.timer_2.setInterval(5000)
self.progress_bar.setTextVisible(False)
self.progress_bar.setStyleSheet(self.style_sheet)
self.label_icon.load(images.ANACONDA_LOGO)
self.label_icon.setMaximumSize(QSize(64, 64))
self.label_icon.setMinimumSize(QSize(64, 64))
self.setWindowTitle('Anaconda Navigator Updater')
self.progress_bar.setMaximumWidth(self.WIDTH / 3)
self.setMinimumWidth(self.WIDTH)
self.setMaximumWidth(self.WIDTH)
self.setMinimumHeight(self.HEIGHT)
# Layouts
layout_status = QHBoxLayout()
layout_status.addWidget(self.label_status)
layout_status.addWidget(SpacerHorizontal())
layout_status.addWidget(self.progress_bar)
layout_text = QVBoxLayout()
layout_text.addWidget(self.label_message)
layout_text.addStretch()
layout_text.addWidget(SpacerVertical())
layout_text.addLayout(layout_status)
layout_icon = QVBoxLayout()
layout_icon.addWidget(self.label_icon)
layout_icon.addStretch()
layout_top = QHBoxLayout()
layout_top.addLayout(layout_icon)
layout_top.addWidget(SpacerHorizontal())
layout_top.addLayout(layout_text)
layout_buttons = QHBoxLayout()
layout_buttons.addStretch()
layout_buttons.addWidget(self.button_cancel)
layout_buttons.addWidget(SpacerHorizontal())
layout_buttons.addWidget(self.button_update)
layout_buttons.addWidget(self.button_launch)
layout = QVBoxLayout()
layout.addLayout(layout_top)
layout.addWidget(SpacerVertical())
layout.addWidget(SpacerVertical())
layout.addStretch()
layout.addLayout(layout_buttons)
self.setLayout(layout)
# Signals
self.button_update.clicked.connect(self.install_update)
self.button_cancel.clicked.connect(self.reject)
self.button_launch.clicked.connect(self.launch)
self.timer.timeout.connect(self.refresh)
self.timer_2.timeout.connect(self.check_conditions)
# Setup
self.timer.start()
self.timer_2.start()
self.check_conditions()
self.refresh()
def check_conditions(self):
"""Check every 5 seconds installed packages in case codna was used."""
packages = self.api.linked(prefix=self.prefix)
package = [p for p in packages if self.PACKAGE in p]
if package:
n, v, b = self.api.split_canonical_name(package[0])
self.current_version = v
else:
self.current_version = None
if self.latest_version is None:
worker_search = self.api.search(self.PACKAGE,
platform=self.api.get_platform())
worker_search.sig_finished.connect(self._search_callback)
else:
worker = self.api.info()
worker.sig_finished.connect(self.setup)
self.check_versions()
def check_versions(self):
"""Check if navigator is up to date."""
if self.latest_version and self.current_version:
from distutils.version import LooseVersion
cur_ver = LooseVersion(self.current_version)
lat_ver = LooseVersion(self.latest_version)
self.up_to_date = cur_ver >= lat_ver
else:
self.up_to_date = False
def _search_callback(self, worker, output, error):
"""Setup the widget."""
if isinstance(output, dict):
packages = output.get(self.PACKAGE, [])
versions = [package.get('version') for package in packages]
unique_versions = []
for version in versions:
if version not in unique_versions:
unique_versions.append(version)
if unique_versions:
self.latest_version = unique_versions[-1]
self.check_versions()
worker = self.api.info()
worker.sig_finished.connect(self.setup)
self.refresh()
def setup(self, worker, info, error):
"""Setup the widget."""
self.info = info
self.setup_ready = True
self.sig_ready.emit()
self.refresh()
if self.button_update.isVisible():
self.button_update.setFocus()
if self.button_launch.isVisible():
self.button_launch.setFocus()
def update_style_sheet(self):
"""Update custom CSS style sheet."""
self.style_sheet = load_style_sheet()
self.setStyleSheet(self.style_sheet)
def refresh(self):
"""Refresh enabled/disabled status of widgets."""
current_version = 'Not installed'
if self.current_version:
current_version = self.current_version
latest_version = '-'
if self.latest_version:
latest_version = self.latest_version
main_message = (
"Current version: <i>{0}</i><br>"
"Available version: <b>{1}</b><br>").format(
current_version, latest_version)
message = self.status
running = self.check_running()
self.button_launch.setVisible(False)
if not self.setup_ready:
self.button_update.setDisabled(True)
self.progress_bar.setVisible(True)
message = 'Updating index...'
self.update_status(message)
elif self.busy:
self.button_update.setDisabled(True)
self.progress_bar.setVisible(True)
else:
self.progress_bar.setVisible(False)
if running:
message = 'Please close Anaconda Navigator before updating.'
self.button_update.setDisabled(running)
elif not running:
self.button_update.setDisabled(False)
if self.success and self.current_version:
message = 'Anaconda Navigator was updated successfully.'
self.button_update.setVisible(False)
self.button_launch.setVisible(True)
elif self.up_to_date:
message = 'Anaconda Navigator is already up to date.'
self.button_update.setVisible(False)
self.button_launch.setVisible(True)
elif not self.error:
self.button_update.setVisible(True)
if self.current_version:
message = ('An update for Anaconda Navigator is now '
'available.')
self.button_update.setText('Update now')
else:
message = (
'Anaconda Navigator is available for install.')
self.button_update.setText('Install now')
if self.error:
self.button_update.setDisabled(False)
message = 'Cannot update Anaconda Navigator, <b>{0}</b>'
message = message.format(self.error)
self.label_status.setText(message)
self.label_message.setText(main_message)
def update_status(self, status='', value=-1, max_val=-1):
"""Update progress bar and message status."""
if status:
self.status = status
self.label_status.setText(status)
if value < 0 and max_val < 0:
self.progress_bar.setRange(0, 0)
else:
self.progress_bar.setMinimum(0)
self.progress_bar.setMaximum(max_val)
self.progress_bar.setValue(value)
def check_running(self):
"""Check if Anaconda Navigator is running."""
# Create file lock
lock = filelock.FileLock(NAVIGATOR_LOCKFILE)
try:
running = False
with lock.acquire(timeout=0.01):
pass
except filelock.Timeout:
running = True
return running
# --- Conda actions and helpers
# -------------------------------------------------------------------------
def partial_output_ready(self, worker, output, error):
"""Handle conda partial output ready."""
self.busy = True
# print(type(output))
# print(output)
# Get errors and data from ouput if it exists
fetch = None
if output and isinstance(output, dict):
fetch = output.get('fetch')
max_val = output.get('maxval', -1)
value = output.get('progress', -1)
if fetch:
status = 'Fetching <b>{0}</b>...'.format(fetch)
self.update_status(status=status, max_val=max_val, value=value)
def output_ready(self, worker, output, error):
"""Handle conda output ready."""
self.check_conditions()
# Get errors and data from ouput if it exists
error_text = output.get('error', '')
exception_type = output.get('exception_type', '')
exception_name = output.get('exception_name', '')
success = output.get('success')
actions = output.get('actions', {})
# op_order = output.get('op_order', [])
# action_check_fetch = actions.get('CHECK_FETCH', [])
# action_rm_fetch = actions.get('RM_FETCHED', [])
# action_fetch = actions.get('FETCH', [])
# action_check_extract = actions.get('CHECK_EXTRACT', [])
# action_rm_extract = actions.get('RM_EXTRACTED', [])
# action_extract = actions.get('EXTRACT', [])
# action_unlink = actions.get('UNLINK', [])
action_link = actions.get('LINK', [])
# action_symlink_conda = actions.get('SYMLINK_CONDA', [])
self.busy = False
# Get errors from json output
if error_text or exception_type or exception_name or not success:
self.error = exception_name
self.success = False
self.up_to_date = False
elif success and action_link:
self.sig_application_updated.emit()
self.error = None
self.success = True
self.up_to_date = False
elif success:
self.success = False
self.error = None
self.up_to_date = True
worker.lock.release()
self.refresh()
def install_update(self):
"""Install the specified version or latest version of navigator."""
self.busy = True
self.refresh()
# conda_prefix = self.info.et('conda_prefix')
# root_prefix = self.info.et('root_prefix')
navigator_prefixes = [
# os.path.join(self.api.ROOT_PREFIX, 'envs', '_navigator_'),
# os.path.join(self.api.ROOT_PREFIX, 'envs', '_conda_'),
self.prefix,
]
for prefix in navigator_prefixes:
if self.api.environment_exists(prefix=prefix):
break
if self.latest_version:
pkgs = ['{0}=={1}'.format(self.PACKAGE, self.latest_version)]
else:
pkgs = [self.PACKAGE.format(self.latest_version)]
# Lock Navigator
lock = filelock.FileLock(NAVIGATOR_LOCKFILE)
lock.acquire()
worker = self.api.install(prefix=prefix, pkgs=pkgs)
worker.lock = lock
worker.sig_partial.connect(self.partial_output_ready)
worker.sig_finished.connect(self.output_ready)
self.refresh()
if self.prefix == self.api.ROOT_PREFIX:
name = 'root'
else:
name = os.path.basename(self.prefix)
self.button_launch.setFocus()
if self.current_version:
msg = 'Updating package on <b>{0}</b>...'.format(name)
else:
msg = 'Installing package on <b>{0}</b>...'.format(name)
self.update_status(msg)
def launch(self):
"""Launch Anaconda Navigator."""
leave_path_alone = True
root_prefix = self.api.ROOT_PREFIX
prefix = self.prefix
command = ['anaconda-navigator']
# Use the app bundle on OSX
if MAC:
command = ['open', os.path.join(prefix, 'Anaconda-Navigator.app')]
launch_cmd(
prefix,
command,
leave_path_alone,
package_name='anaconda-navigator-app',
root_prefix=root_prefix,
)
self.close()
# --- Qt Overrides
# -------------------------------------------------------------------------
def reject(self):
"""Override Qt method."""
if self.busy:
msg_box = MessageBoxQuestion(title='Quit Navigator Updater?',
text='Anaconda Navigator is being '
'updated. <br><br>'
'Are you sure you want to quit?')
if msg_box.exec_():
super(MainDialog, self).reject()
else:
super(MainDialog, self).reject()
class PackagesDialog(DialogBase):
"""Package dependencies dialog."""
sig_setup_ready = Signal()
def __init__(
self,
parent=None,
packages=None,
pip_packages=None,
remove_only=False,
update_only=False,
):
"""About dialog."""
super(PackagesDialog, self).__init__(parent=parent)
# Variables
self.api = AnacondaAPI()
self.actions = None
self.packages = packages or []
self.pip_packages = pip_packages or []
# Widgets
self.stack = QStackedWidget()
self.table = QTableWidget()
self.text = QTextEdit()
self.label_description = LabelBase()
self.label_status = LabelBase()
self.progress_bar = QProgressBar()
self.button_ok = ButtonPrimary('Apply')
self.button_cancel = ButtonNormal('Cancel')
# Widget setup
self.text.setReadOnly(True)
self.stack.addWidget(self.table)
self.stack.addWidget(self.text)
if remove_only:
text = 'The following packages will be removed:<br>'
else:
text = 'The following packages will be modified:<br>'
self.label_description.setText(text)
self.label_description.setWordWrap(True)
self.label_description.setWordWrap(True)
self.label_status.setWordWrap(True)
self.table.horizontalScrollBar().setVisible(False)
self.table.setSelectionBehavior(QAbstractItemView.SelectRows)
self.table.setAlternatingRowColors(True)
self.table.setSelectionMode(QAbstractItemView.NoSelection)
self.table.setSortingEnabled(True)
self._hheader = self.table.horizontalHeader()
self._vheader = self.table.verticalHeader()
self._hheader.setStretchLastSection(True)
self._hheader.setDefaultAlignment(Qt.AlignLeft)
self._hheader.setSectionResizeMode(self._hheader.Fixed)
self._vheader.setSectionResizeMode(self._vheader.Fixed)
self.button_ok.setMinimumWidth(70)
self.button_ok.setDefault(True)
self.base_minimum_width = 300 if remove_only else 420
if remove_only:
self.setWindowTitle("Remove Packages")
elif update_only:
self.setWindowTitle("Update Packages")
else:
self.setWindowTitle("Install Packages")
self.setMinimumWidth(self.base_minimum_width)
# Layouts
layout_progress = QHBoxLayout()
layout_progress.addWidget(self.label_status)
layout_progress.addWidget(SpacerHorizontal())
layout_progress.addWidget(self.progress_bar)
layout_buttons = QHBoxLayout()
layout_buttons.addStretch()
layout_buttons.addWidget(self.button_cancel)
layout_buttons.addWidget(SpacerHorizontal())
layout_buttons.addWidget(self.button_ok)
layout = QVBoxLayout()
layout.addWidget(self.label_description)
layout.addWidget(SpacerVertical())
layout.addWidget(self.stack)
layout.addWidget(SpacerVertical())
layout.addLayout(layout_progress)
layout.addWidget(SpacerVertical())
layout.addWidget(SpacerVertical())
layout.addLayout(layout_buttons)
self.setLayout(layout)
# Signals
self.button_ok.clicked.connect(self.accept)
self.button_cancel.clicked.connect(self.reject)
self.button_ok.setDisabled(True)
# Setup
self.table.setDisabled(True)
self.update_status('Solving package specifications',
value=0,
max_value=0)
def setup(self, worker, output, error):
"""Setup the widget to include the list of dependencies."""
if not isinstance(output, dict):
output = {}
packages = sorted(pkg.split('==')[0] for pkg in self.packages)
success = output.get('success')
error = output.get('error', '')
exception_name = output.get('exception_name', '')
actions = output.get('actions', [])
prefix = worker.prefix
if exception_name:
message = exception_name
else:
# All requested packages already installed
message = output.get('message', ' ')
navi_deps_error = self.api.check_navigator_dependencies(
actions, prefix)
description = self.label_description.text()
if error:
description = 'No packages will be modified.'
self.stack.setCurrentIndex(1)
self.button_ok.setDisabled(True)
if self.api.is_offline():
error = ("Some of the functionality of Anaconda Navigator "
"will be limited in <b>offline mode</b>. <br><br>"
"Installation and upgrade actions will be subject to "
"the packages currently available on your package "
"cache.")
self.text.setText(error)
elif navi_deps_error:
description = 'No packages will be modified.'
error = ('Downgrading/removing these packages will modify '
'Anaconda Navigator dependencies.')
self.text.setText(error)
self.stack.setCurrentIndex(1)
message = 'NavigatorDependenciesError'
self.button_ok.setDisabled(True)
elif success and actions:
self.stack.setCurrentIndex(0)
# Conda 4.3.x
if isinstance(actions, list):
actions_link = actions[0].get('LINK', [])
actions_unlink = actions[0].get('UNLINK', [])
# Conda 4.4.x
else:
actions_link = actions.get('LINK', [])
actions_unlink = actions.get('UNLINK', [])
deps = set()
deps = deps.union({p['name'] for p in actions_link})
deps = deps.union({p['name'] for p in actions_unlink})
deps = deps - set(packages)
deps = sorted(list(deps))
count_total_packages = len(packages) + len(deps)
plural_total = 's' if count_total_packages != 1 else ''
plural_selected = 's' if len(packages) != 1 else ''
self.table.setRowCount(count_total_packages)
self.table.setColumnCount(4)
if actions_link:
description = '{0} package{1} will be installed'.format(
count_total_packages, plural_total)
self.table.showColumn(2)
self.table.showColumn(3)
elif actions_unlink and not actions_link:
self.table.hideColumn(2)
self.table.hideColumn(3)
self.table.setHorizontalHeaderLabels(
['Name', 'Unlink', 'Link', 'Channel'])
description = '{0} package{1} will be removed'.format(
count_total_packages, plural_total)
for row, pkg in enumerate(packages + deps):
link_item = [p for p in actions_link if p['name'] == pkg]
if not link_item:
link_item = {
'version': '-'.center(len('link')),
'channel': '-'.center(len('channel')),
}
else:
link_item = link_item[0]
unlink_item = [p for p in actions_unlink if p['name'] == pkg]
if not unlink_item:
unlink_item = {
'version': '-'.center(len('link')),
}
else:
unlink_item = unlink_item[0]
unlink_version = str(unlink_item['version'])
link_version = str(link_item['version'])
item_unlink_v = QTableWidgetItem(unlink_version)
item_link_v = QTableWidgetItem(link_version)
item_link_c = QTableWidgetItem(link_item['channel'])
if pkg in packages:
item_name = QTableWidgetItem(pkg)
else:
item_name = QTableWidgetItem('*' + pkg)
items = [item_name, item_unlink_v, item_link_v, item_link_c]
for column, item in enumerate(items):
item.setFlags(Qt.ItemIsEnabled | Qt.ItemIsSelectable)
self.table.setItem(row, column, item)
if deps:
message = (
'<b>*</b> indicates the package is a dependency of a '
'selected package{0}<br>').format(plural_selected)
self.button_ok.setEnabled(True)
self.table.resizeColumnsToContents()
unlink_width = self.table.columnWidth(1)
if unlink_width < 60:
self.table.setColumnWidth(1, 60)
self.table.setHorizontalHeaderLabels(
['Name ', 'Unlink ', 'Link ', 'Channel '])
self.table.setEnabled(True)
self.update_status(message=message)
self.label_description.setText(description)
# Adjust size after data has populated the table
self.table.resizeColumnsToContents()
width = sum(
self.table.columnWidth(i) for i in range(self.table.columnCount()))
delta = (self.width() - self.table.width() +
self.table.verticalHeader().width() + 10)
new_width = width + delta
if new_width < self.base_minimum_width:
new_width = self.base_minimum_width
self.setMinimumWidth(new_width)
self.setMaximumWidth(new_width)
self.sig_setup_ready.emit()
def update_status(self, message='', value=None, max_value=None):
"""Update status of packages dialog."""
self.label_status.setText(message)
if max_value is None and value is None:
self.progress_bar.setVisible(False)
else:
self.progress_bar.setVisible(True)
self.progress_bar.setMaximum(max_value)
self.progress_bar.setValue(value)
class BatchProcessingView(View):
btn_run_batch: QPushButton
progress_bar: QProgressBar
field_channel: QLineEdit
field_workflow_config: FileInput
field_input_dir: FileInput
field_output_dir: FileInput
def __init__(self, controller: IBatchProcessingController):
super().__init__(template_class=MainTemplate)
if controller is None:
raise ValueError("controller")
self._controller = controller
self.setObjectName("batchProcessingView")
def load(self, model=None):
self._setup_ui()
def _setup_ui(self):
"""
Set up the UI for the BatchProcessingView
"""
layout = QVBoxLayout()
self.setLayout(layout)
# Workflow config
self.field_workflow_config = FileInput(
mode=FileInputMode.FILE, filter="Json file (*.json)", placeholder_text="Load a JSON workflow file..."
)
self.field_workflow_config.file_selected.connect(self._form_field_changed)
row1 = FormRow("1. Load workflow:", self.field_workflow_config)
# Channel index
self.field_channel = QLineEdit("0")
self.field_channel.setValidator(QIntValidator(bottom=0))
self.field_channel.textChanged.connect(self._form_field_changed)
row2 = FormRow("2. Structure channel index:", self.field_channel)
# Input dir
self.field_input_dir = FileInput(mode=FileInputMode.DIRECTORY, placeholder_text="Select a directory...")
self.field_input_dir.file_selected.connect(self._form_field_changed)
row3 = FormRow("3. Input directory:", self.field_input_dir)
# Output dir
self.field_output_dir = FileInput(mode=FileInputMode.DIRECTORY, placeholder_text="Select a directory...")
self.field_output_dir.file_selected.connect(self._form_field_changed)
row4 = FormRow("4. Output directory:", self.field_output_dir)
# Help
label = QLabel()
label.setText("Supported file formats: .tif, .tiff, .czi, .ome.tif, .ome.tiff")
form = QWidget()
form.setLayout(Form([row1, row2, row3, row4]))
layout.addWidget(form)
layout.addWidget(label)
# Submit
self.btn_run_batch = QPushButton("Run Batch")
self.btn_run_batch.clicked.connect(self._btn_run_batch_clicked)
self.update_button(enabled=False)
layout.addWidget(self.btn_run_batch)
# Progress bar
self.progress_bar = QProgressBar()
self.progress_bar.setRange(0, 100)
self.progress_bar.setValue(0)
self.progress_bar.setTextVisible(True)
self.progress_bar.setVisible(False)
layout.addWidget(self.progress_bar)
def update_button(self, enabled: bool):
"""
Update state of process button
Inputs:
enabled: True to enable the button, false to disable it
"""
self.btn_run_batch.setEnabled(enabled)
def set_run_batch_in_progress(self):
"""
Update page to reflect that a batch run is in progress
"""
# TODO make a CancelButton widget to avoid repeating this connect / disconnect pattern
self.btn_run_batch.setText("Cancel")
self.btn_run_batch.clicked.disconnect()
self.btn_run_batch.clicked.connect(self._btn_run_batch_cancel_clicked)
self.progress_bar.setVisible(True)
def reset_run_batch(self):
"""
Reset page state to reflect that there is no batch run in progress
"""
self.progress_bar.setValue(0)
self.btn_run_batch.setText("Run Batch")
self.btn_run_batch.clicked.disconnect()
self.btn_run_batch.clicked.connect(self._btn_run_batch_clicked)
self.progress_bar.setVisible(False)
def set_progress(self, progress: int):
"""
Update progress bar
Inputs:
progress (int): numerical value to set the progress bar to
"""
self.progress_bar.setValue(progress)
#####################################################################
# Event handlers
#####################################################################
def _btn_run_batch_clicked(self):
self._controller.run_batch()
def _btn_run_batch_cancel_clicked(self):
self.btn_run_batch.setText("Canceling...")
self._controller.cancel_run_batch()
def _form_field_changed(self, value):
workflow_config = self.field_workflow_config.selected_file
channel_index = int(self.field_channel.text()) if self.field_channel.text() else None
input_dir = self.field_input_dir.selected_file
output_dir = self.field_output_dir.selected_file
self._controller.update_batch_parameters(workflow_config, channel_index, input_dir, output_dir)
class AlgorithmOptions(QWidget):
def __init__(self, settings: StackSettings, image_view: StackImageView):
super().__init__()
self.settings = settings
self.view_name = image_view.name
self.show_result = QEnumComboBox(
enum_class=LabelEnum) # QCheckBox("Show result")
self._set_show_label_from_settings()
self.opacity = QDoubleSpinBox()
self.opacity.setRange(0, 1)
self.opacity.setSingleStep(0.1)
self._set_opacity_from_settings()
self.only_borders = QCheckBox("Only borders")
self._set_border_mode_from_settings()
self.borders_thick = QSpinBox()
self.borders_thick.setRange(1, 25)
self.borders_thick.setSingleStep(1)
self._set_border_thick_from_settings()
self.execute_in_background_btn = QPushButton("Execute in background")
self.execute_in_background_btn.setToolTip(
"Run calculation in background. Put result in multiple files panel"
)
self.execute_btn = QPushButton("Execute")
self.execute_btn.setStyleSheet("QPushButton{font-weight: bold;}")
self.execute_all_btn = QPushButton("Execute all")
self.execute_all_btn.setToolTip(
"Execute in batch mode segmentation with current parameter. File list need to be specified in image tab."
)
self.execute_all_btn.setDisabled(True)
self.save_parameters_btn = QPushButton("Save parameters")
self.block_execute_all_btn = False
self.algorithm_choose_widget = AlgorithmChoose(settings,
mask_algorithm_dict)
self.algorithm_choose_widget.result.connect(self.execution_result_set)
self.algorithm_choose_widget.finished.connect(self.execution_finished)
self.algorithm_choose_widget.progress_signal.connect(
self.progress_info)
# self.stack_layout = QStackedLayout()
self.keep_chosen_components_chk = QCheckBox("Save selected components")
self.keep_chosen_components_chk.setToolTip(
"Save chosen components when loading segmentation form file\n or from multiple file widget."
)
self.keep_chosen_components_chk.stateChanged.connect(
self.set_keep_chosen_components)
self.keep_chosen_components_chk.setChecked(
settings.keep_chosen_components)
self.show_parameters = QPushButton("Show parameters")
self.show_parameters.setToolTip(
"Show parameters of segmentation for each components")
self.show_parameters_widget = SegmentationInfoDialog(
self.settings, self.algorithm_choose_widget.change_algorithm)
self.show_parameters.clicked.connect(self.show_parameters_widget.show)
self.choose_components = ChosenComponents()
self.choose_components.check_change_signal.connect(
image_view.refresh_selected)
self.choose_components.mouse_leave.connect(image_view.component_unmark)
self.choose_components.mouse_enter.connect(image_view.component_mark)
# WARNING works only with one channels algorithms
# SynchronizeValues.add_synchronization("channels_chose", widgets_list)
self.chosen_list = []
self.progress_bar2 = QProgressBar()
self.progress_bar2.setHidden(True)
self.progress_bar = QProgressBar()
self.progress_bar.setHidden(True)
self.progress_info_lab = QLabel()
self.progress_info_lab.setHidden(True)
self.file_list = []
self.batch_process = BatchProceed()
self.batch_process.progress_signal.connect(self.progress_info)
self.batch_process.error_signal.connect(self.execution_all_error)
self.batch_process.execution_done.connect(self.execution_all_done)
self.batch_process.range_signal.connect(self.progress_bar.setRange)
self.is_batch_process = False
self.setContentsMargins(0, 0, 0, 0)
main_layout = QVBoxLayout()
# main_layout.setSpacing(0)
opt_layout = QHBoxLayout()
opt_layout.setContentsMargins(0, 0, 0, 0)
opt_layout.addWidget(self.show_result)
opt_layout.addWidget(right_label("Opacity:"))
opt_layout.addWidget(self.opacity)
main_layout.addLayout(opt_layout)
opt_layout2 = QHBoxLayout()
opt_layout2.setContentsMargins(0, 0, 0, 0)
opt_layout2.addWidget(self.only_borders)
opt_layout2.addWidget(right_label("Border thick:"))
opt_layout2.addWidget(self.borders_thick)
main_layout.addLayout(opt_layout2)
btn_layout = QGridLayout()
btn_layout.setContentsMargins(0, 0, 0, 0)
btn_layout.addWidget(self.execute_btn, 0, 0)
btn_layout.addWidget(self.execute_in_background_btn, 0, 1)
btn_layout.addWidget(self.execute_all_btn, 1, 0)
btn_layout.addWidget(self.save_parameters_btn, 1, 1)
main_layout.addLayout(btn_layout)
main_layout.addWidget(self.progress_bar2)
main_layout.addWidget(self.progress_bar)
main_layout.addWidget(self.progress_info_lab)
main_layout.addWidget(self.algorithm_choose_widget, 1)
# main_layout.addWidget(self.algorithm_choose)
# main_layout.addLayout(self.stack_layout, 1)
main_layout.addWidget(self.choose_components)
down_layout = QHBoxLayout()
down_layout.addWidget(self.keep_chosen_components_chk)
down_layout.addWidget(self.show_parameters)
main_layout.addLayout(down_layout)
main_layout.addStretch()
main_layout.setContentsMargins(0, 0, 0, 0)
# main_layout.setSpacing(0)
self.setLayout(main_layout)
# noinspection PyUnresolvedReferences
self.execute_in_background_btn.clicked.connect(
self.execute_in_background)
self.execute_btn.clicked.connect(self.execute_action)
self.execute_all_btn.clicked.connect(self.execute_all_action)
self.save_parameters_btn.clicked.connect(self.save_parameters)
# noinspection PyUnresolvedReferences
self.opacity.valueChanged.connect(self._set_opacity)
# noinspection PyUnresolvedReferences
self.show_result.currentEnumChanged.connect(self._set_show_label)
self.only_borders.stateChanged.connect(self._set_border_mode)
# noinspection PyUnresolvedReferences
self.borders_thick.valueChanged.connect(self._set_border_thick)
image_view.component_clicked.connect(
self.choose_components.other_component_choose)
settings.chosen_components_widget = self.choose_components
settings.components_change_list.connect(
self.choose_components.new_choose)
settings.image_changed.connect(
self.choose_components.remove_components)
settings.connect_to_profile(
f"{self.view_name}.image_state.only_border",
self._set_border_mode_from_settings)
settings.connect_to_profile(
f"{self.view_name}.image_state.border_thick",
self._set_border_thick_from_settings)
settings.connect_to_profile(f"{self.view_name}.image_state.opacity",
self._set_opacity_from_settings)
settings.connect_to_profile(f"{self.view_name}.image_state.show_label",
self._set_show_label_from_settings)
def _set_border_mode(self, value: bool):
self.settings.set_in_profile(
f"{self.view_name}.image_state.only_border", value)
def _set_border_thick(self, value: int):
self.settings.set_in_profile(
f"{self.view_name}.image_state.border_thick", value)
def _set_opacity(self, value: float):
self.settings.set_in_profile(f"{self.view_name}.image_state.opacity",
value)
def _set_show_label(self, value: LabelEnum):
self.settings.set_in_profile(
f"{self.view_name}.image_state.show_label", value)
def _set_border_mode_from_settings(self):
self.only_borders.setChecked(
self.settings.get_from_profile(
f"{self.view_name}.image_state.only_border", True))
def _set_border_thick_from_settings(self):
self.borders_thick.setValue(
self.settings.get_from_profile(
f"{self.view_name}.image_state.border_thick", 1))
def _set_opacity_from_settings(self):
self.opacity.setValue(
self.settings.get_from_profile(
f"{self.view_name}.image_state.opacity", 1.0))
def _set_show_label_from_settings(self):
self.show_result.setCurrentEnum(
self.settings.get_from_profile(
f"{self.view_name}.image_state.show_label",
LabelEnum.Show_results))
@Slot(int)
def set_keep_chosen_components(self, val):
self.settings.set_keep_chosen_components(val)
def save_parameters(self):
dial = PSaveDialog(io_functions.save_parameters_dict,
system_widget=False,
settings=self.settings,
path=IO_SAVE_DIRECTORY)
if not dial.exec_():
return
res = dial.get_result()
res.save_class.save(res.save_destination,
self.algorithm_choose_widget.current_parameters())
def file_list_change(self, val):
self.file_list = val
if len(self.file_list) > 0 and not self.block_execute_all_btn:
self.execute_all_btn.setEnabled(True)
else:
self.execute_all_btn.setDisabled(True)
def get_chosen_components(self):
return sorted(self.choose_components.get_chosen())
@property
def segmentation(self):
return self.settings.roi
@segmentation.setter
def segmentation(self, val):
self.settings.roi = val
def _image_changed(self):
self.settings.roi = None
self.choose_components.set_chose([], [])
def _execute_in_background_init(self):
if self.batch_process.isRunning():
return
self.progress_bar2.setVisible(True)
self.progress_bar2.setRange(0, self.batch_process.queue.qsize())
self.progress_bar2.setValue(self.batch_process.index)
self.progress_bar.setVisible(True)
self.progress_bar.setValue(0)
self.execute_btn.setDisabled(True)
self.batch_process.start()
def execute_in_background(self):
# TODO check if components are properly passed
widget = self.algorithm_choose_widget.current_widget()
segmentation_profile = widget.get_segmentation_profile()
task = BatchTask(self.settings.get_project_info(),
segmentation_profile, None)
self.batch_process.add_task(task)
self.progress_bar2.setRange(0, self.progress_bar2.maximum() + 1)
self._execute_in_background_init()
def execute_all_action(self):
dial = PSaveDialog(
SaveROI,
settings=self.settings,
system_widget=False,
path="io.save_batch",
file_mode=PSaveDialog.Directory,
)
if not dial.exec_():
return
folder_path = str(dial.selectedFiles()[0])
widget = self.algorithm_choose_widget.current_widget()
save_parameters = dial.values
segmentation_profile = widget.get_segmentation_profile()
for file_path in self.file_list:
task = BatchTask(file_path, segmentation_profile,
(folder_path, save_parameters))
self.batch_process.add_task(task)
self.progress_bar2.setRange(
0,
self.progress_bar2.maximum() + len(self.file_list))
self._execute_in_background_init()
def execution_all_error(self, text):
QMessageBox.warning(self, "Proceed error", text)
def execution_all_done(self):
if not self.batch_process.queue.empty():
self._execute_in_background_init()
return
self.execute_btn.setEnabled(True)
self.block_execute_all_btn = False
if len(self.file_list) > 0:
self.execute_all_btn.setEnabled(True)
self.progress_bar.setHidden(True)
self.progress_bar2.setHidden(True)
self.progress_info_lab.setHidden(True)
def execute_action(self):
self.execute_btn.setDisabled(True)
self.execute_all_btn.setDisabled(True)
self.block_execute_all_btn = True
self.is_batch_process = False
self.progress_bar.setRange(0, 0)
self.choose_components.setDisabled(True)
chosen = sorted(self.choose_components.get_chosen())
blank = get_mask(self.settings.roi, self.settings.mask, chosen)
if blank is not None:
# Problem with handling time data in algorithms
# TODO Fix This
blank = blank[0]
self.progress_bar.setHidden(False)
widget: AlgorithmSettingsWidget = self.algorithm_choose_widget.current_widget(
)
widget.set_mask(blank)
self.progress_bar.setRange(0, widget.algorithm.get_steps_num())
widget.execute()
self.chosen_list = chosen
def progress_info(self, text, num, file_name="", file_num=0):
self.progress_info_lab.setVisible(True)
if file_name != "":
self.progress_info_lab.setText(file_name + "\n" + text)
else:
self.progress_info_lab.setText(text)
self.progress_bar.setValue(num)
self.progress_bar2.setValue(file_num)
def execution_finished(self):
self.execute_btn.setEnabled(True)
self.block_execute_all_btn = False
if len(self.file_list) > 0:
self.execute_all_btn.setEnabled(True)
self.progress_bar.setHidden(True)
self.progress_info_lab.setHidden(True)
self.choose_components.setDisabled(False)
def execution_result_set(self, result):
self.settings.set_segmentation_result(result)
def showEvent(self, _):
widget = self.algorithm_choose_widget.current_widget()
widget.image_changed(self.settings.image)