def parse_container(node):
sda_bundle = SDABundle()
patient_node = node.find('./Patient')
sda_patient = parse_patient(patient_node)
sda_bundle.sda_patient = sda_patient
for medication_node in node.findall('./Medications/Medication'):
sda_medication = parse_medication(medication_node)
sda_bundle.sda_medications.append(sda_medication)
for lab_order_node in node.findall('./LabOrders/LabOrder'):
sda_lab_order = parse_lab_order(lab_order_node)
sda_bundle.sda_lab_orders.append(sda_lab_order)
for procedure_node in node.findall('./Procedures/Procedure'):
sda_procedure = parse_lab_order(procedure_node)
sda_bundle.sda_procedures.append(sda_procedure)
for encounter_node in node.findall('./Encounters/Encounter'):
sda_encounter = parse_lab_order(encounter_node)
sda_bundle.sda_encounters.append(sda_encounter)
return sda_bundle
def demographics_to_sda_bundle(demographics):
# TODO
facility = Facility.query.filter(Facility.code == 'RADAR').first_or_404()
sda_bundle = SDABundle(facility=facility, patient=demographics.patient)
sda_patient = SDAPatient()
if demographics.gender == 1:
gender_code = 'M'
gender_description = 'Male'
else:
gender_code = 'F'
gender_description = 'Male'
sda_patient.data = {
'name': {
'given_name': demographics.first_name,
'family_name': demographics.last_name,
},
'birth_time': demographics.date_of_birth,
'gender': {
'code': gender_code,
'description': gender_description,
}
}
if demographics.date_of_death:
sda_patient.data['death_time'] = demographics.date_of_death
sda_bundle.sda_patient = sda_patient
sda_patient_address = SDAPatientAddress()
sda_patient_address.data = {
'zip': {
'description': demographics.postcode
}
}
street = '; '.join(x for x in [demographics.address_line_1, demographics.address_line_2, demographics.address_line_3] if x)
if street:
sda_patient_address.data['street'] = street
sda_patient.addresses.append(sda_patient_address)
if demographics.home_number:
set_path(sda_patient.data, ['contact_info', 'home_phone_number'], demographics.home_number)
if demographics.work_number:
set_path(sda_patient.data, ['contact_info', 'work_phone_number'], demographics.work_number)
if demographics.mobile_number:
set_path(sda_patient.data, ['contact_info', 'mobile_phone_number'], demographics.mobile_number)
if demographics.email_address:
set_path(sda_patient.data, ['contact_info', 'email_address'], demographics.email_address)
if demographics.alias_first_name or demographics.alias_last_name:
sda_patient_alias = SDAPatientAlias()
sda_patient_alias.data = {}
if demographics.alias_first_name:
sda_patient_alias.data['given_name'] = demographics.first_name
if demographics.alias_last_name:
sda_patient_alias.data['family_name'] = demographics.last_name
sda_patient.aliases.append(sda_patient_alias)
return sda_bundle