class Pair:
def __init__(self, receptordb, liganddb):
self.ligand = Ligand(liganddb)
self.receptor = Receptor(receptordb)
def foreachPair(self, pid, sink):
self.ligand.foreachId(lambda cid: sink(pid, cid))
def foreach(self, sink, criteria=''):
self.receptor.foreachId(lambda pid: self.foreachPair(pid, sink))
def size(self, rcriteria='1=1', lcriteria='1=1'):
ligands = self.ligand.size(lcriteria)
receptors = self.receptor.size(rcriteria)
return ligands * receptors
def close(self):
self.ligand.close()
self.receptor.close()
from carro import Carro
from receptor import Receptor
from board import Board
import time
arduino = Board()
carro = Carro()
receptor = Receptor()
while (True):
try:
receptor.atualizaDados()
x = receptor.getX()
y = receptor.getY()
f = receptor.getF()
carro._estercamento.estercar(x)
#carro._motor.acelerar(y)
if (f == "0"):
#carro._freio.setFreio()
print("Freando")
print("****")
except (KeyboardInterrupt):
print("Ate mais!")
carro._motor.desligar()
break
def run_as_node(args):
config = ReceptorConfig(args.config, map_args_to_config(args))
receptor = Receptor(config)
logger.info("Running as Receptor node with ID: {}".format(
receptor.node_id))
node.mainloop(receptor, args.ping_interval)
def run_as_controller(args):
config = ReceptorConfig(cmdline_args=map_args_to_config(args))
receptor = Receptor(config)
logger.info(f'Starting up as node ID {receptor.node_id}')
controller.mainloop(receptor, args.listen_address, args.listen_port,
args.socket_path)
from button import Button
from receptor import Receptor
from commands import ButtonCommand
recep = Receptor()
butt = Button()
butt.set_command(ButtonCommand(recep, {"ola": "mundo"}))
butt.action()
import os
from parameter import Parameter
from receptor import Receptor
p = Parameter()
dir = p._('project.dir') + '/'
project_dir = dir + p._('project.wizard.create.name')
data_dir = project_dir + '/data/'
molecule = Receptor(data_dir + p._('project.wizard.receptor.db'))
columns = p._('project.wizard.receptor_report.columns')
molecule.foreachRecord(columns, lambda id, fields: print(id, fields, sep='\t'))
molecule.close()
def __init__(self, receptordb, liganddb):
self.ligand = Ligand(liganddb)
self.receptor = Receptor(receptordb)
from path import Path
p = Parameter()
pt = Path(p)
#locate tree
dir = p._('project.dir') + '/'
name = p._('project.wizard.create.name')
project_dir = dir + name
data_dir = project_dir + '/data/'
filename = '{}/stage/{}'.format(project_dir,
p._('project.wizard.load.receptor'))
# import ligands
molecule = Receptor(data_dir + p._('project.wizard.receptor.db'))
molecule.clear()
# import data
for id in open(filename):
id = id.strip('\n')
molecule.add(id)
molecule.commit()
# download structures
def instage(id, pt):
return pt.filename('{}.pdb'.format(id), pt.stage, '*.pdb') != None
def copy(id, dir, pt, pids):