def temp_sample_file(samples):
f = tempfile.NamedTemporaryFile(mode="wt")
t = SampleTable(samples)
t.write(f)
f.seek(0)
return f
def test_validate(self):
t = SampleTable(self.recs)
self.assertEqual(t.validate(), None)
def test_validate_with_duplicated_sample_name(self):
self.recs[1]["SampleID"] = "S1"
t = SampleTable(self.recs)
self.assertRaises(ValueError, t.validate)
def test_write(self):
t = SampleTable(self.recs)
output_file = io.StringIO()
t.write(output_file)
self.assertEqual(output_file.getvalue(), NORMAL_TSV)
