def __init__(self,
data,
x=None,
plugin=None,
mpl_kwargs={
'width': 8,
'height': 2
},
parent=None):
super(DialogPlotEffect, self).__init__(parent)
self.ui = Ui_DialogPlotEffect()
self.ui.setupUi(self)
self.data = data
# Setup MPL containers
self.mpl_orig = _MplCanvas(subplot=111, **mpl_kwargs)
self.mpl_orig.fig.canvas.setMinimumSize(100, 200)
self.mpl_orig.fig.canvas.setSizePolicy(
_QtWidgets.QSizePolicy.Expanding, _QtWidgets.QSizePolicy.Minimum)
self.mpl_affected = _MplCanvas(subplot=111, **mpl_kwargs)
self.mpl_affected.fig.canvas.setMinimumSize(100, 200)
self.mpl_affected.fig.canvas.setSizePolicy(
_QtWidgets.QSizePolicy.Expanding, _QtWidgets.QSizePolicy.Minimum)
# Show(), although not needed, enables mpl-tight_layout
# to work later on
self.show()
self.ui.verticalLayout.insertWidget(1, self.mpl_orig, stretch=1)
self.ui.verticalLayout.insertWidget(1, self.mpl_orig.toolbar)
self.ui.verticalLayout.insertWidget(3, self.mpl_affected)
self.ui.verticalLayout.insertWidget(3, self.mpl_affected.toolbar)
# Plugin that brings functionality to PlotEffect
self.plugin = plugin
# Signal emited when something changes in the plugin widget
self.plugin.changed.connect(self.widget_changed)
# Setup indep. variable
if x is None:
self.x = _np.linspace(0, data.shape[0], self.data.shape[0])
else:
self.x = x
self.make_orig_plots(self.data)
if self.plugin is not None:
self.ui.verticalLayout.insertWidget(8, plugin)
self.show()
self.widget_changed()
self.mpl_orig.draw()
self.mpl_affected.draw()
self.ui.pushButtonOk.clicked.connect(self.accept)
self.ui.pushButtonCancel.clicked.connect(self.reject)
def __init__(self, data, x=None, plugin=None, parent=None):
super(DialogPlotEffectFuture, self).__init__(parent)
self.ui = Ui_DialogPlotEffect()
self.ui.setupUi(self)
self.data = data
# Setup MPL containers
self.mpl_orig = _MplCanvas(subplot=111)
self.mpl_affected = _MplCanvas(subplot=111)
# Show(), although not needed, enables mpl-tight_layout
# to work later on
self.show()
self.ui.verticalLayout.insertWidget(1, self.mpl_orig)
self.ui.verticalLayout.insertWidget(1, self.mpl_orig.toolbar)
self.ui.verticalLayout.insertWidget(3, self.mpl_affected)
self.ui.verticalLayout.insertWidget(3, self.mpl_affected.toolbar)
# Plugin that brings functionality to PlotEffect
self.plugin = plugin
# Signal emited when something changes in the plugin widget
self.plugin.changed.connect(self.widget_changed)
# Setup indep. variable
if x is None:
self.x = _np.linspace(0, data.shape[0], self.data.shape[0])
else:
self.x = x
# If data is a list (assumed to be a list of ndarrays),
# plot each item in list
if isinstance(data, _np.ndarray):
try:
self.mpl_orig.ax.plot(self.x, data)
except:
self.mpl_orig.ax.plot(self.x, data.T)
elif isinstance(data, list):
for d in data:
try:
self.mpl_orig.ax.plot(self.x, d)
except:
self.mpl_orig.ax.plot(self.x, d.T)
self.plot_labels()
if self.plugin is not None:
self.ui.verticalLayout.insertWidget(8, plugin)
self.show()
self.widget_changed()
self.mpl_orig.draw()
self.mpl_affected.draw()
self.ui.pushButtonOk.clicked.connect(self.accept)
self.ui.pushButtonCancel.clicked.connect(self.reject)
def setup(self, parent=None):
# Generic load/init designer-based GUI
# super(DialogAbstractFactorization, self).__init__(parent) ### EDIT ###
self.ui = Ui_Dialog() ### EDIT ###
self.ui.setupUi(self) ### EDIT ###
self.ui.pushButtonNext.clicked.connect(self.advance)
self.ui.pushButtonPrev.clicked.connect(self.advance)
self.ui.pushButtonGoTo.clicked.connect(self.advance)
self.ui.pushButtonCancel.clicked.connect(self.reject)
self.ui.pushButtonOk.clicked.connect(self.accept)
self.ui.pushButtonClear.clicked.connect(self.clear)
self.ui.pushButtonApply.clicked.connect(self.applyCheckBoxes)
self.ui.pushButtonScript.clicked.connect(self.runScript)
self._first_factor_visible = 0
self._num_factor_visible = 6
self.ui.lcdSelectedFactors.display(0)
self.ui.lcdMaxFactors.display(self.max_factors())
self.factorWins = []
self.factorLabelCheckBoxes = [
self.ui.checkBox, self.ui.checkBox_2, self.ui.checkBox_3,
self.ui.checkBox_4, self.ui.checkBox_5, self.ui.checkBox_6
]
for count in range(self._num_factor_visible):
self.factorWins.append(_MplCanvas(subplot=211))
self.factorWins[count].ax[0].axis('Off')
if self._mpl_v1:
self.factorWins[count].ax[1].hold('Off')
self.ui.gridLayout.addWidget(self.factorWins[0], 1, 0)
self.ui.gridLayout.addWidget(self.factorWins[1], 1, 1)
self.ui.gridLayout.addWidget(self.factorWins[2], 1, 2)
self.ui.gridLayout.addWidget(self.factorWins[3], 3, 0)
self.ui.gridLayout.addWidget(self.factorWins[4], 3, 1)
self.ui.gridLayout.addWidget(self.factorWins[5], 3, 2)
self.reconCurrent = _MplCanvas(subplot=211)
self.reconCurrent.ax[0].axis('Off')
if self._mpl_v1:
self.reconCurrent.ax[1].hold('Off')
self.reconRemainder = _MplCanvas(subplot=211)
self.reconRemainder.ax[0].axis('Off')
if self._mpl_v1:
self.reconRemainder.ax[1].hold('Off')
self.ui.verticalLayout_3.insertWidget(1, self.reconCurrent)
self.ui.verticalLayout_3.insertWidget(-1, self.reconRemainder)
for count in range(self._num_factor_visible):
self.factorLabelCheckBoxes[count].setText('Keep: ' + str(count))
def setup(self, parent = None):
# Generic load/init designer-based GUI
# super(DialogAbstractFactorization, self).__init__(parent) ### EDIT ###
self.ui = Ui_Dialog() ### EDIT ###
self.ui.setupUi(self) ### EDIT ###
self.ui.pushButtonNext.clicked.connect(self.advance)
self.ui.pushButtonPrev.clicked.connect(self.advance)
self.ui.pushButtonGoTo.clicked.connect(self.advance)
self.ui.pushButtonCancel.clicked.connect(self.reject)
self.ui.pushButtonOk.clicked.connect(self.accept)
self.ui.pushButtonClear.clicked.connect(self.clear)
self.ui.pushButtonApply.clicked.connect(self.applyCheckBoxes)
self.ui.pushButtonScript.clicked.connect(self.runScript)
self._first_factor_visible = 0
self._num_factor_visible = 6
self.ui.lcdSelectedFactors.display(0)
self.ui.lcdMaxFactors.display(self.max_factors())
self.factorWins = []
self.factorLabelCheckBoxes = [self.ui.checkBox,
self.ui.checkBox_2,
self.ui.checkBox_3,
self.ui.checkBox_4,
self.ui.checkBox_5,
self.ui.checkBox_6]
for count in range(self._num_factor_visible):
self.factorWins.append(_MplCanvas(subplot=211))
self.factorWins[count].ax[0].axis('Off')
self.factorWins[count].ax[1].hold('Off')
self.ui.gridLayout.addWidget(self.factorWins[0],1,0)
self.ui.gridLayout.addWidget(self.factorWins[1],1,1)
self.ui.gridLayout.addWidget(self.factorWins[2],1,2)
self.ui.gridLayout.addWidget(self.factorWins[3],3,0)
self.ui.gridLayout.addWidget(self.factorWins[4],3,1)
self.ui.gridLayout.addWidget(self.factorWins[5],3,2)
self.reconCurrent = _MplCanvas(subplot=211)
self.reconCurrent.ax[0].axis('Off')
self.reconCurrent.ax[1].hold('Off')
self.reconRemainder = _MplCanvas(subplot=211)
self.reconRemainder.ax[0].axis('Off')
self.reconRemainder.ax[1].hold('Off')
self.ui.verticalLayout_3.insertWidget(1,self.reconCurrent)
self.ui.verticalLayout_3.insertWidget(-1,self.reconRemainder)
for count in range(self._num_factor_visible):
self.factorLabelCheckBoxes[count].setText('Keep: ' + str(count))
def setup(self, limit_to=None, parent=None):
"""
Basic UI setup
"""
# Generic start to any pyQT program
super(SciPlotUI, self).__init__(parent)
self.ui = Ui_Plotter()
self.ui.setupUi(self)
self.setSizePolicy(_QSizePolicy.Expanding, _QSizePolicy.Expanding)
# Global "data" i.e., title, x-label, y-label, etc
self._global_data = _DataGlobal()
# MPL plot widget
self.mpl_widget = _MplCanvas(height=6, dpi=100)
# Hold is deprecated in MPL2
if not self._mpl_v2:
self.mpl_widget.ax.hold(True)
# Insert MPL widget and toolbar
self.ui.verticalLayout.insertWidget(0, self.mpl_widget)
self.ui.verticalLayout.insertWidget(0, self.mpl_widget.toolbar)
self.updateAxisParameters()
self.mpl_widget.draw()
# Insert TabWidget
self.ui.modelTabWidget = _QTabWidget()
self.ui.verticalLayout.insertWidget(-1, self.ui.modelTabWidget)
# Setup what tabs are available:
self._tabAvailability(limit_to)
for count in self._to_setup:
count()
# SIGNALS AND SLOTS
# Global labels
self.ui.lineEditTitle.editingFinished.connect(
self.updateLabelsFromLineEdit)
self.ui.lineEditXLabel.editingFinished.connect(
self.updateLabelsFromLineEdit)
self.ui.lineEditYLabel.editingFinished.connect(
self.updateLabelsFromLineEdit)
# Non-tracked (not saved) properties
self.ui.comboBoxAspect.currentIndexChanged.connect(self.axisAspect)
self.ui.comboBoxAxisScaling.currentIndexChanged.connect(
self.axisScaling)
self.ui.checkBoxAxisVisible.stateChanged.connect(self.axisVisible)
self.ui.lineEditXLimMin.editingFinished.connect(self.axisLimits)
self.ui.lineEditXLimMax.editingFinished.connect(self.axisLimits)
self.ui.lineEditYLimMin.editingFinished.connect(self.axisLimits)
self.ui.lineEditYLimMax.editingFinished.connect(self.axisLimits)
# Actions
self.ui.pushButtonClearAll.pressed.connect(self.clearAll)
self.ui.pushButtonDefaultView.pressed.connect(self.defaultView)
def setup(self, limit_to=None, parent=None):
"""
Basic UI setup
"""
# Generic start to any pyQT program
super(SciPlotUI, self).__init__(parent)
self.ui = Ui_Plotter()
self.ui.setupUi(self)
self.setSizePolicy(_QSizePolicy.Expanding,
_QSizePolicy.Expanding)
# Global "data" i.e., title, x-label, y-label, etc
self._global_data = _DataGlobal()
# MPL plot widget
self.mpl_widget = _MplCanvas(height=6, dpi=100)
# Hold is deprecated in MPL2
if not self._mpl_v2:
self.mpl_widget.ax.hold(True)
# Insert MPL widget and toolbar
self.ui.verticalLayout.insertWidget(0, self.mpl_widget)
self.ui.verticalLayout.insertWidget(0, self.mpl_widget.toolbar)
self.updateAxisParameters()
self.mpl_widget.draw()
# Insert TabWidget
self.ui.modelTabWidget = _QTabWidget()
self.ui.verticalLayout.insertWidget(-1, self.ui.modelTabWidget)
# Setup what tabs are available:
self._tabAvailability(limit_to)
for count in self._to_setup:
count()
# SIGNALS AND SLOTS
# Global labels
self.ui.lineEditTitle.editingFinished.connect(self.updateLabelsFromLineEdit)
self.ui.lineEditXLabel.editingFinished.connect(self.updateLabelsFromLineEdit)
self.ui.lineEditYLabel.editingFinished.connect(self.updateLabelsFromLineEdit)
# Non-tracked (not saved) properties
self.ui.comboBoxAspect.currentIndexChanged.connect(self.axisAspect)
self.ui.comboBoxAxisScaling.currentIndexChanged.connect(self.axisScaling)
self.ui.checkBoxAxisVisible.stateChanged.connect(self.axisVisible)
self.ui.lineEditXLimMin.editingFinished.connect(self.axisLimits)
self.ui.lineEditXLimMax.editingFinished.connect(self.axisLimits)
self.ui.lineEditYLimMin.editingFinished.connect(self.axisLimits)
self.ui.lineEditYLimMax.editingFinished.connect(self.axisLimits)
# Actions
self.ui.pushButtonClearAll.pressed.connect(self.clearAll)
self.ui.pushButtonDefaultView.pressed.connect(self.defaultView)
def __init__(self, sgl_color_widget_list = None, parent = None, **kwargs):
super(widgetCompositeColor, self).__init__(parent)
## Double check the spellings
self._img_defaults = {'showcbar':False, 'axison':True}
self.ui = Ui_CompositeColor_Form()
self.ui.setupUi(self)
# Initialize underlying data
self.initData(sgl_color_widget_list)
self.external_plots = []
# Create stand-in image data
self.data.grayscaleimage = _np.dot(_np.ones([100,1]),_np.linspace(1,100,100)[None,:])
self.data.set_x(_np.linspace(1,400,self.data.xlen))
self.data.set_y(_np.linspace(1,400,self.data.ylen))
winextent = (self.data.x.min(), self.data.x.max(), self.data.y.min(), self.data.y.max())
# Instantiate mpl widget
self.mpl = _MplCanvas(**kwargs)
self.mpl.cbar = None # Monkey patch on a cbar object
# Background color-related
# Get all MPL named colors
color_list = ['black', 'white', 'CUSTOM', 'red', 'green', 'blue',
'magenta', 'cyan', 'yellow']
color_list.extend(sorted(set(_mpl.colors.cnames.keys()) - set(color_list)))
self.ui.comboBoxBGColor.addItems(color_list)
self.ui.comboBoxBGColor.setCurrentIndex(color_list.index('black'))
# Emission/Absorption mode settings
self.ui.comboBoxColorMode.setCurrentIndex(0) # Emission mode is default
# Create stand-in image data
self.createImg(img = self.data.image, xunits = self.data.xunits,
yunits = self.data.yunits,
extent = winextent)
self.mpl.fig.tight_layout()
# Insert mpl widget into this widget
self.ui.verticalLayout.insertWidget(0,self.mpl,_QtCore.Qt.AlignHCenter)
self.ui.verticalLayout.insertWidget(0,self.mpl.toolbar, _QtCore.Qt.AlignHCenter)
self.popimage = widgetPopSpectrumGS(self)
self.ui.verticalLayout.insertWidget(1, self.popimage, _QtCore.Qt.AlignLeft)
self.popimage.ui.pushButtonPop.pressed.connect(lambda: self.createImg_Ext(img = self.data.image,
showcbar=False,
extent=self.data.winextent,
xunits=self.data.xunits,
yunits=self.data.yunits,
parent=parent))
self.popimage.ui.pushButtonGSPop.setEnabled(False)
self.popimage.ui.pushButtonSpectrum.setEnabled(False)
self.ui.comboBoxBGColor.setEnabled(False)
self.ui.comboBoxBGColor.setVisible(False) # Broken -- don't know if it will ever work
self.ui.labelBGColor.setVisible(False) # Broken
self.ui.comboBoxColorMode.currentIndexChanged.connect(self.changeMode)
def __init__(self, parent=None, **kwargs):
super(widgetBWImg, self).__init__(parent)
self.ui = Ui_BWImage_Form()
self.ui.setupUi(self)
# Initialize underlying data
self.initData()
# Stand-in image data
self.data.grayscaleimage = _np.dot(_np.ones([100, 1]),
_np.linspace(1, 100, 100)[None, :])
self.data.set_x(_np.linspace(1, 400, self.data.xlen))
self.data.set_y(_np.linspace(1, 400, self.data.ylen))
# Calculate extent of image
winextent = (self.data.x.min(), self.data.x.max(), self.data.y.min(),
self.data.y.max())
# MPL canvas
self.mpl = _MplCanvas(**kwargs)
self.mpl.cbar = None # Monkey patch on a cbar object
# Create stand-image plot
self.createImg(img=self.data.image,
xunits=self.data.xunits,
yunits=self.data.yunits,
extent=winextent,
showcbar=True,
axison=True)
self.mpl.fig.tight_layout()
# Insert canvas widget into this widget
self.ui.verticalLayout.insertWidget(0, self.mpl,
_QtCore.Qt.AlignHCenter)
self.ui.verticalLayout.insertWidget(0, self.mpl.toolbar,
_QtCore.Qt.AlignHCenter)
# SIGNAL & SLOTS
self.ui.checkBoxFixed.stateChanged.connect(self.checkBoxFixed)
self.ui.checkBoxCompress.stateChanged.connect(self.checkBoxCompress)
self.ui.checkBoxRemOutliers.stateChanged.connect(
self.checkBoxRemOutliers)
self.ui.spinBoxStdDevs.valueChanged.connect(
self.spinBoxOutliersChanged)
self.ui.lineEditMin.editingFinished.connect(self.textEditMinMaxSet)
self.ui.lineEditMax.editingFinished.connect(self.textEditMinMaxSet)
def __init__(self, sgl_color_widget_list=None, parent=None, **kwargs):
super(widgetCompositeColor, self).__init__(parent)
self.ui = Ui_CompositeColor_Form()
self.ui.setupUi(self)
# Initialize underlying data
self.initData(sgl_color_widget_list)
# Create stand-in image data
self.data.grayscaleimage = _np.dot(_np.ones([100, 1]),
_np.linspace(1, 100, 100)[None, :])
self.data.set_x(_np.linspace(1, 400, self.data.xlen))
self.data.set_y(_np.linspace(1, 400, self.data.ylen))
winextent = (self.data.x.min(), self.data.x.max(), self.data.y.min(),
self.data.y.max())
# Instantiate mpl widget
self.mpl = _MplCanvas(**kwargs)
self.mpl.cbar = None # Monkey patch on a cbar object
# Create stand-in image data
self.createImg(img=self.data.image,
xunits=self.data.xunits,
yunits=self.data.yunits,
extent=winextent,
showcbar=False,
axison=True)
self.mpl.fig.tight_layout()
# Insert mpl widget into this widget
self.ui.verticalLayout.insertWidget(0, self.mpl,
_QtCore.Qt.AlignHCenter)
self.ui.verticalLayout.insertWidget(0, self.mpl.toolbar,
_QtCore.Qt.AlignHCenter)
# SIGNALS & SLOTS
self.ui.checkBoxFixed.stateChanged.connect(self.checkBoxFixed)
self.ui.checkBoxCompress.stateChanged.connect(self.checkBoxCompress)
self.ui.checkBoxRemOutliers.stateChanged.connect(
self.checkBoxRemOutliers)
self.ui.spinBoxStdDevs.valueChanged.connect(
self.spinBoxOutliersChanged)
def __init__(self, parent = None, **kwargs):
super().__init__(parent)
self.win = Ui_Blank()
self.win.setupUi(self)
self.win.gridLayout.setEnabled(False)
self._img_defaults = {'showcbar': True, 'axison': True}
self.gsinfo = widgetGrayScaleInfoBar(parent=self)
self.colormode = widgetColorMode(parent=self)
self.colormode.ui.comboBoxColorMode.setCurrentIndex(1)
self.colormode.ui.comboBoxColormap.setVisible(True)
self.colormode.ui.labelColormap.setVisible(True)
self.colormode.ui.comboBoxFGColor.setVisible(False)
self.colormode.ui.comboBoxBGColor.setVisible(False)
self.colormode.ui.comboBoxColorMode.setVisible(False)
self.colormode.ui.labelBGColor.setVisible(False)
self.colormode.ui.labelFGColor.setVisible(False)
self.colormode.ui.labelColorMode.setVisible(False)
self.popimage = widgetPopSpectrumGS(parent=self)
self.popimage.ui.pushButtonGSPop.setVisible(False)
self.ui = self.gsinfo.ui # Alias
self.win.horizLayout = _QHBoxLayout()
self.win.horizLayout.setContentsMargins(2,2,2,2)
self.win.verticalLayout.insertLayout(0, self.win.horizLayout)
self.win.horizLayout.insertWidget(0, self.gsinfo, _QtCore.Qt.AlignHCenter)
self.win.horizLayout.insertWidget(0, self.colormode, _QtCore.Qt.AlignBottom)
# Initialize underlying data
self.initData()
self.external_plots = []
# Stand-in image data
self.data.grayscaleimage = _np.dot(_np.ones([100,1]),_np.linspace(1,100,100)[None,:])
self.data.set_x(_np.linspace(1,400,self.data.xlen))
self.data.set_y(_np.linspace(1,400,self.data.ylen))
# Calculate extent of image
winextent = (self.data.x.min(), self.data.x.max(), self.data.y.min(), self.data.y.max())
# MPL canvas
self.mpl = _MplCanvas(**kwargs)
self.mpl.cbar = None # Monkey patch on a cbar object
# Create stand-image plot
self.createImg(img=self.data.image, xunits=self.data.xunits,
yunits=self.data.yunits,
extent=winextent,
cmap=self.colormode.ui.comboBoxColormap.currentText())
self.mpl.fig.tight_layout()
# Insert canvas widget into this widget
self.win.verticalLayout.insertWidget(0,self.mpl,_QtCore.Qt.AlignCenter)
self.win.verticalLayout.insertWidget(0,self.popimage,_QtCore.Qt.AlignCenter)
self.win.verticalLayout.insertWidget(0,self.mpl.toolbar, _QtCore.Qt.AlignHCenter)
# # SIGNAL & SLOTS
self.ui.checkBoxFixed.stateChanged.connect(self.checkBoxFixed)
self.ui.checkBoxRemOutliers.stateChanged.connect(self.checkBoxRemOutliers)
self.ui.spinBoxStdDevs.editingFinished.connect(self.checkBoxRemOutliers)
# New
self.ui.comboBoxAboveMax.currentIndexChanged.connect(self.comboBoxCompress)
self.ui.comboBoxBelowMin.currentIndexChanged.connect(self.comboBoxCompress)
self.ui.spinBoxMax.editingFinished.connect(self.spinBoxMinMaxSet)
self.ui.spinBoxMin.editingFinished.connect(self.spinBoxMinMaxSet)
self.colormode.ui.comboBoxColormap.currentIndexChanged.connect(self.checkBoxFixed)
self.popimage.ui.pushButtonPop.pressed.connect(lambda: self.createImg_Ext(img=self.data.image,
cmap=self.colormode.ui.comboBoxColormap.currentText(),
showcbar=True,
extent=self.data.winextent,
xunits=self.data.xunits,
yunits=self.data.yunits,
parent=parent))
def __init__(self, data=None, parent=None):
# Generic load/init designer-based GUI
super(DialogSVD, self).__init__(parent) ### EDIT ###
self.ui = Ui_Dialog() ### EDIT ###
self.ui.setupUi(self) ### EDIT ###
self.ui.pushButtonNext.clicked.connect(self.advance)
self.ui.pushButtonPrev.clicked.connect(self.advance)
self.ui.pushButtonGoTo.clicked.connect(self.advance)
self.ui.pushButtonCancel.clicked.connect(self.reject)
self.ui.pushButtonOk.clicked.connect(self.accept)
self.ui.pushButtonClear.clicked.connect(self.clear)
self.ui.pushButtonApply.clicked.connect(self.applyCheckBoxes)
self.ui.pushButtonScript.clicked.connect(self.runScript)
self.firstSV = 0
self.spanSV = 6
self.Mlen = 0
self.Nlen = 0
self.Olen = 0
self.data = _np.zeros([self.Mlen, self.Nlen, self.Olen])
self.selected_svs = set()
self.ui.lcdSelectedFactors.display(len(self.selected_svs))
self.svWins = []
self.svLabelCheckBoxes = [
self.ui.checkBox, self.ui.checkBox_2, self.ui.checkBox_3,
self.ui.checkBox_4, self.ui.checkBox_5, self.ui.checkBox_6
]
for count in range(self.spanSV):
self.svWins.append(_MplCanvas(subplot=211))
self.svWins[count].ax[0].axis('Off')
self.svWins[count].ax[1].hold('Off')
self.ui.gridLayout.addWidget(self.svWins[0], 1, 0)
self.ui.gridLayout.addWidget(self.svWins[1], 1, 1)
self.ui.gridLayout.addWidget(self.svWins[2], 1, 2)
self.ui.gridLayout.addWidget(self.svWins[3], 3, 0)
self.ui.gridLayout.addWidget(self.svWins[4], 3, 1)
self.ui.gridLayout.addWidget(self.svWins[5], 3, 2)
self.reconCurrent = _MplCanvas(subplot=211)
self.reconCurrent.ax[0].axis('Off')
self.reconCurrent.ax[1].hold('Off')
self.reconRemainder = _MplCanvas(subplot=211)
self.reconRemainder.ax[0].axis('Off')
self.reconRemainder.ax[1].hold('Off')
self.ui.verticalLayout_3.insertWidget(1, self.reconCurrent)
self.ui.verticalLayout_3.insertWidget(4, self.reconRemainder)
for count in range(self.spanSV):
self.svLabelCheckBoxes[count].setText('Keep: ' + str(count))
if data is not None:
self.data = data
if data.ndim == 3:
self.Mlen, self.Nlen, self.Olen = data.shape
self.reconCurrent.ax[0].imshow(_np.mean(data, axis=-1),
interpolation='none',
origin='lower')
self.reconCurrent.draw()
data = data.reshape([-1, self.Olen])
self.svddata = self.SvdData()
self.svddata.orig_shape = [self.Mlen, self.Nlen, self.Olen]
self.svddata.U, self.svddata.S, self.svddata.Vh = _svd(
data, full_matrices=False)
self.maxsvs = self.svddata.S.size
self.ui.lcdMaxFactors.display(self.maxsvs)
self.ui.spinBoxGoTo.setMaximum(self.maxsvs)
self.updateCurrentRemainder()
#print('U: {}, S: {}, Vh: {}'.format(self.svddata.U.shape, self.svddata.S.shape, self.svddata.Vh.shape))
self.updateSVPlots()
def __init__(self, parent=None, **kwargs):
super(widgetSglColor, self).__init__(parent)
self.ui = Ui_SglColorImage_Form()
self.math = widgetColorMath()
self.ui.setupUi(self)
for color in self.COLORMAP_ORDER:
self.ui.comboBox.addItem(color)
# Initialize data
self.initData()
self.data.colormap = self.COLORMAPS[self.ui.comboBox.currentText()]
self.external_plots = []
# Create stand-in imahe
self.data.grayscaleimage = _np.dot(_np.ones([100, 1]),
_np.linspace(1, 100, 100)[None, :])
self.data.set_x(_np.linspace(1, 400, self.data.xlen))
self.data.set_y(_np.linspace(1, 400, self.data.ylen))
# Instantiate MPL widget
self.mpl = _MplCanvas(**kwargs)
self.mpl.cbar = None # Monkey patch on a cbar object
self.createImg(img=self.data.image,
xunits=self.data.xunits,
yunits=self.data.yunits,
extent=self.data.winextent,
showcbar=False,
axison=False)
self.mpl.fig.tight_layout()
# Embed MPL widget into this widget
self.ui.horizontalLayoutGainImg.addWidget(self.mpl)
self.ui.verticalLayoutMain.insertWidget(1, self.mpl.toolbar,
_QtCore.Qt.AlignVCenter)
self.ui.verticalLayoutMain.addWidget(self.math)
# SIGNALS & SLOTS
self.ui.comboBox.currentIndexChanged.connect(self.changeColor)
self.math.ui.lineEditMin.editingFinished.connect(
self.textEditMinMaxSet)
self.math.ui.lineEditMax.editingFinished.connect(
self.textEditMinMaxSet)
self.ui.gainSlider.valueChanged.connect(self.gainSliderChanged)
self.ui.pushButtonGain1.pressed.connect(self.gain1)
self.math.ui.checkBoxFixed.stateChanged.connect(self.checkBoxFixed)
self.math.ui.checkBoxCompress.stateChanged.connect(
self.checkBoxCompress)
self.ui.pushButtonPop.pressed.connect(
lambda: self.createImg_Ext(img=self.data.image,
showcbar=False,
extent=self.data.winextent,
xunits=self.data.xunits,
yunits=self.data.yunits))
self.ui.pushButtonGSPop.pressed.connect(
lambda: self.createImg_Ext(img=self.data.imageGS,
showcbar=True,
extent=self.data.winextent,
xunits=self.data.xunits,
yunits=self.data.yunits))
def __init__(self, data=None, parent = None):
# Generic load/init designer-based GUI
super(DialogSVD, self).__init__(parent) ### EDIT ###
self.ui = Ui_Dialog() ### EDIT ###
self.ui.setupUi(self) ### EDIT ###
self.ui.pushButtonNext.clicked.connect(self.advance)
self.ui.pushButtonPrev.clicked.connect(self.advance)
self.ui.pushButtonGoTo.clicked.connect(self.advance)
self.ui.pushButtonCancel.clicked.connect(self.reject)
self.ui.pushButtonOk.clicked.connect(self.accept)
self.ui.pushButtonClear.clicked.connect(self.clear)
self.ui.pushButtonApply.clicked.connect(self.applyCheckBoxes)
self.ui.pushButtonScript.clicked.connect(self.runScript)
self.firstSV = 0
self.spanSV = 6
self.Mlen = 0
self.Nlen = 0
self.Olen = 0
self.data = _np.zeros([self.Mlen, self.Nlen, self.Olen])
self.selected_svs = set()
self.ui.lcdSelectedFactors.display(len(self.selected_svs))
self.svWins = []
self.svLabelCheckBoxes = [self.ui.checkBox,
self.ui.checkBox_2,
self.ui.checkBox_3,
self.ui.checkBox_4,
self.ui.checkBox_5,
self.ui.checkBox_6]
for count in range(self.spanSV):
self.svWins.append(_MplCanvas(subplot=211))
self.svWins[count].ax[0].axis('Off')
self.svWins[count].ax[1].hold('Off')
self.ui.gridLayout.addWidget(self.svWins[0],1,0)
self.ui.gridLayout.addWidget(self.svWins[1],1,1)
self.ui.gridLayout.addWidget(self.svWins[2],1,2)
self.ui.gridLayout.addWidget(self.svWins[3],3,0)
self.ui.gridLayout.addWidget(self.svWins[4],3,1)
self.ui.gridLayout.addWidget(self.svWins[5],3,2)
self.reconCurrent = _MplCanvas(subplot=211)
self.reconCurrent.ax[0].axis('Off')
self.reconCurrent.ax[1].hold('Off')
self.reconRemainder = _MplCanvas(subplot=211)
self.reconRemainder.ax[0].axis('Off')
self.reconRemainder.ax[1].hold('Off')
self.ui.verticalLayout_3.insertWidget(1,self.reconCurrent)
self.ui.verticalLayout_3.insertWidget(4,self.reconRemainder)
for count in range(self.spanSV):
self.svLabelCheckBoxes[count].setText('Keep: ' + str(count))
if data is not None:
self.data = data
if data.ndim == 3:
self.Mlen, self.Nlen, self.Olen = data.shape
self.reconCurrent.ax[0].imshow(_np.mean(data, axis=-1),interpolation='none', origin='lower')
self.reconCurrent.draw()
data = data.reshape([-1, self.Olen])
self.svddata = self.SvdData()
self.svddata.orig_shape = [self.Mlen, self.Nlen, self.Olen]
self.svddata.U, self.svddata.S, self.svddata.Vh = _svd(data, full_matrices=False)
self.maxsvs = self.svddata.S.size
self.ui.lcdMaxFactors.display(self.maxsvs)
self.ui.spinBoxGoTo.setMaximum(self.maxsvs)
self.updateCurrentRemainder()
#print('U: {}, S: {}, Vh: {}'.format(self.svddata.U.shape, self.svddata.S.shape, self.svddata.Vh.shape))
self.updateSVPlots()
def __init__(self, parent=None):
super(MainWindowMosaic, self).__init__(parent)
self.ui = Ui_MainWindow()
self.ui.setupUi(self)
self.setupListWidget()
self.ui.spinBoxIntercept.setValue(self.frequency_calib['Intercept'])
self.ui.spinBoxSlope.setValue(self.frequency_calib['Slope'])
self.ui.spinBoxProbe.setValue(self.frequency_calib['Probe'])
self.ui.spinBoxCalibWL.setValue(self.frequency_calib['Calib_WL'])
self.ui.spinBoxCenterWL.setValue(self.frequency_calib['Center_WL'])
# Internal data
self.init_internals()
self.mpl = _MplCanvas(parent=self)
self.ui.verticalLayoutMPL.insertWidget(0, self.mpl,
_QtCore.Qt.AlignCenter)
self.ui.verticalLayoutMPL.insertWidget(0, self.mpl.toolbar,
_QtCore.Qt.AlignHCenter)
# SIGNALS AND SLOTS
self.ui.actionAddFromHDF.triggered.connect(self.addDataset)
self.ui.pushButtonAddDataset.pressed.connect(self.addDataset)
self.ui.actionSaveToHDF5.triggered.connect(self.save)
self.ui.sliderFreq.valueChanged.connect(self.updateSlider)
self.ui.sliderFreq.sliderReleased.connect(self.updateMosaicImage)
self.ui.lineEditPix.editingFinished.connect(self.lineEditPixChange)
self.ui.spinBoxMRows.editingFinished.connect(self.updateParams)
self.ui.spinBoxNCols.editingFinished.connect(self.updateParams)
self.ui.comboBoxRowCol.currentIndexChanged.connect(self.updateParams)
self.ui.checkBoxFlipH.stateChanged.connect(self.updateParams)
self.ui.checkBoxFlipV.stateChanged.connect(self.updateParams)
self.ui.checkBoxTranspose.stateChanged.connect(self.updateParams)
self.ui.spinBoxStartRow.editingFinished.connect(self.updateParams)
self.ui.spinBoxStartCol.editingFinished.connect(self.updateParams)
self.ui.spinBoxEndRow.editingFinished.connect(self.updateParams)
self.ui.spinBoxEndCol.editingFinished.connect(self.updateParams)
# ! Currently, cannot save compress in HDF5
self.ui.checkBoxCompress.setEnabled(False)
# self.ui.checkBoxCompress.stateChanged.connect(self.updateParams)
self.ui.spinBoxSlope.editingFinished.connect(self.updateFrequency)
self.ui.spinBoxIntercept.editingFinished.connect(self.updateFrequency)
self.ui.spinBoxProbe.editingFinished.connect(self.updateFrequency)
self.ui.spinBoxCalibWL.editingFinished.connect(self.updateFrequency)
self.ui.spinBoxCenterWL.editingFinished.connect(self.updateFrequency)
# self.ui.spinBoxXStepSize.editingFinished.connect(self.updateSpace)
# self.ui.spinBoxYStepSize.editingFinished.connect(self.updateSpace)
self.ui.pushButtonMoveUp.pressed.connect(self.promote_demote_list_item)
self.ui.pushButtonMoveDown.pressed.connect(
self.promote_demote_list_item)
self.ui.pushButtonDeleteDataset.pressed.connect(self.deleteDataset)
self.ui.listWidgetDatasets.reordered.connect(self.list_reordered)
# Close event
self.ui.closeEvent = self.closeEvent
self.ui.actionExit.triggered.connect(self.closeEvent)
def __init__(self, data, x=None, plugin=None, parent=None):
super(DialogPlotEffectFuture, self).__init__(parent)
self.ui = Ui_DialogPlotEffect()
self.ui.setupUi(self)
self.data = data
# Setup MPL containers
self.mpl_orig = _MplCanvas(subplot=111)
self.mpl_affected = _MplCanvas(subplot=111)
# Show(), although not needed, enables mpl-tight_layout
# to work later on
self.show()
self.ui.verticalLayout.insertWidget(1, self.mpl_orig)
self.ui.verticalLayout.insertWidget(1, self.mpl_orig.toolbar)
self.ui.verticalLayout.insertWidget(3, self.mpl_affected)
self.ui.verticalLayout.insertWidget(3, self.mpl_affected.toolbar)
# Plugin that brings functionality to PlotEffect
self.plugin = plugin
# Signal emited when something changes in the plugin widget
self.plugin.changed.connect(self.widget_changed)
# Setup indep. variable
if x is None:
self.x = _np.linspace(0,data.shape[0],self.data.shape[0])
else:
self.x = x
# If data is a list (assumed to be a list of ndarrays),
# plot each item in list
if isinstance(data, _np.ndarray):
try:
self.mpl_orig.ax.plot(self.x,data)
except:
self.mpl_orig.ax.plot(self.x,data.T)
elif isinstance(data, list):
for d in data:
try:
self.mpl_orig.ax.plot(self.x,d)
except:
self.mpl_orig.ax.plot(self.x,d.T)
self.plot_labels()
if self.plugin is not None:
self.ui.verticalLayout.insertWidget(8, plugin)
self.show()
self.widget_changed()
self.mpl_orig.draw()
self.mpl_affected.draw()
self.ui.pushButtonOk.clicked.connect(self.accept)
self.ui.pushButtonCancel.clicked.connect(self.reject)
