Exemple #1
0
def configuration(parent_package='', top_path=None):
    from numpy.distutils.system_info import get_info, NotFoundError
    from numpy.distutils.misc_util import Configuration
    from scipy._build_utils import get_g77_abi_wrappers, get_sgemv_fix

    config = Configuration('arpack', parent_package, top_path)

    lapack_opt = get_info('lapack_opt')

    if not lapack_opt:
        raise NotFoundError('no lapack/blas resources found')

    config = Configuration('arpack', parent_package, top_path)

    arpack_sources = [join('ARPACK', 'SRC', '*.f')]
    arpack_sources.extend([join('ARPACK', 'UTIL', '*.f')])

    arpack_sources += get_g77_abi_wrappers(lapack_opt)

    config.add_library('arpack_scipy',
                       sources=arpack_sources,
                       include_dirs=[join('ARPACK', 'SRC')])

    ext_sources = ['arpack.pyf.src']
    ext_sources += get_sgemv_fix(lapack_opt)
    config.add_extension(
        '_arpack',
        sources=ext_sources,
        libraries=['arpack_scipy'],
        extra_info=lapack_opt,
        depends=arpack_sources,
    )

    config.add_data_dir('tests')
    return config
Exemple #2
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def configuration(parent_package='',top_path=None):
    from numpy.distutils.system_info import get_info, NotFoundError
    from numpy.distutils.misc_util import Configuration
    from scipy._build_utils import get_g77_abi_wrappers, get_sgemv_fix

    lapack_opt = get_info('lapack_opt')

    if not lapack_opt:
        raise NotFoundError('no lapack/blas resources found')

    config = Configuration('arpack', parent_package, top_path)

    arpack_sources = [join('ARPACK','SRC', '*.f')]
    arpack_sources.extend([join('ARPACK','UTIL', '*.f')])

    arpack_sources += get_g77_abi_wrappers(lapack_opt)

    config.add_library('arpack_scipy', sources=arpack_sources,
                       include_dirs=[join('ARPACK', 'SRC')])

    ext_sources = ['arpack.pyf.src']
    ext_sources += get_sgemv_fix(lapack_opt)
    config.add_extension('_arpack',
                         sources=ext_sources,
                         libraries=['arpack_scipy'],
                         extra_info=lapack_opt,
                         depends=arpack_sources,
                         )

    config.add_data_dir('tests')

    # Add license files
    config.add_data_files('ARPACK/COPYING')

    return config
Exemple #3
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def configuration(parent_package='',top_path=None):
    from numpy.distutils.misc_util import Configuration
    from numpy.distutils.system_info import get_info
    from scipy._build_utils import get_sgemv_fix
    from scipy._build_utils import numpy_nodepr_api

    config = Configuration('dsolve',parent_package,top_path)
    config.add_data_dir('tests')

    lapack_opt = get_info('lapack_opt',notfound_action=2)
    if sys.platform == 'win32':
        superlu_defs = [('NO_TIMER',1)]
    else:
        superlu_defs = []
    superlu_defs.append(('USE_VENDOR_BLAS',1))

    superlu_src = join(dirname(__file__), 'SuperLU', 'SRC')

    sources = list(glob.glob(join(superlu_src, '*.c')))
    headers = list(glob.glob(join(superlu_src, '*.h')))
    if os.name == 'nt' and ('FPATH' in os.environ or 'MKLROOT' in os.environ):
        # when using MSVC + MKL, lsame is already in MKL
        sources.remove(join(superlu_src, 'lsame.c'))

    config.add_library('superlu_src',
                       sources=sources,
                       macros=superlu_defs,
                       include_dirs=[superlu_src],
                       )

    # Extension
    ext_sources = ['_superlumodule.c',
                   '_superlu_utils.c',
                   '_superluobject.c']
    ext_sources += get_sgemv_fix(lapack_opt)

    config.add_extension('_superlu',
                         sources=ext_sources,
                         libraries=['superlu_src'],
                         depends=(sources + headers),
                         extra_info=lapack_opt,
                         **numpy_nodepr_api
                         )

    return config
Exemple #4
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def configuration(parent_package='', top_path=None):
    from numpy.distutils.system_info import get_info, NotFoundError, numpy_info
    from numpy.distutils.misc_util import Configuration, get_numpy_include_dirs
    from scipy._build_utils import (get_sgemv_fix, get_g77_abi_wrappers,
                                    split_fortran_files)

    config = Configuration('linalg', parent_package, top_path)

    lapack_opt = get_info('lapack_opt')

    if not lapack_opt:
        raise NotFoundError('no lapack/blas resources found')

    atlas_version = ([
        v[3:-3]
        for k, v in lapack_opt.get('define_macros', []) if k == 'ATLAS_INFO'
    ] + [None])[0]
    if atlas_version:
        print(('ATLAS version: %s' % atlas_version))

    # fblas:
    sources = ['fblas.pyf.src']
    sources += get_g77_abi_wrappers(lapack_opt)
    sources += get_sgemv_fix(lapack_opt)

    config.add_extension('_fblas',
                         sources=sources,
                         depends=['fblas_l?.pyf.src'],
                         extra_info=lapack_opt)

    # flapack:
    sources = ['flapack.pyf.src']
    sources += get_g77_abi_wrappers(lapack_opt)

    config.add_extension('_flapack',
                         sources=sources,
                         depends=['flapack_user.pyf.src'],
                         extra_info=lapack_opt)

    if atlas_version is not None:
        # cblas:
        config.add_extension('_cblas',
                             sources=['cblas.pyf.src'],
                             depends=['cblas.pyf.src', 'cblas_l1.pyf.src'],
                             extra_info=lapack_opt)

        # clapack:
        config.add_extension('_clapack',
                             sources=['clapack.pyf.src'],
                             depends=['clapack.pyf.src'],
                             extra_info=lapack_opt)

    # _flinalg:
    config.add_extension('_flinalg',
                         sources=[join('src', 'det.f'),
                                  join('src', 'lu.f')],
                         extra_info=lapack_opt)

    # _interpolative:
    routines_to_split = [
        'dfftb1',
        'dfftf1',
        'dffti1',
        'dsint1',
        'dzfft1',
        'id_srand',
        'idd_copyints',
        'idd_id2svd0',
        'idd_pairsamps',
        'idd_permute',
        'idd_permuter',
        'idd_random_transf0',
        'idd_random_transf0_inv',
        'idd_random_transf_init0',
        'idd_subselect',
        'iddp_asvd0',
        'iddp_rsvd0',
        'iddr_asvd0',
        'iddr_rsvd0',
        'idz_estrank0',
        'idz_id2svd0',
        'idz_permute',
        'idz_permuter',
        'idz_random_transf0_inv',
        'idz_random_transf_init0',
        'idz_random_transf_init00',
        'idz_realcomp',
        'idz_realcomplex',
        'idz_reco',
        'idz_subselect',
        'idzp_aid0',
        'idzp_aid1',
        'idzp_asvd0',
        'idzp_rsvd0',
        'idzr_asvd0',
        'idzr_reco',
        'idzr_rsvd0',
        'zfftb1',
        'zfftf1',
        'zffti1',
    ]
    print('Splitting linalg.interpolative Fortran source files')
    dirname = os.path.split(os.path.abspath(__file__))[0]
    fnames = split_fortran_files(join(dirname, 'src', 'id_dist', 'src'),
                                 routines_to_split)
    fnames = [join('src', 'id_dist', 'src', f) for f in fnames]
    config.add_extension('_interpolative',
                         fnames + ["interpolative.pyf"],
                         extra_info=lapack_opt)

    # _calc_lwork:
    config.add_extension('_calc_lwork', [join('src', 'calc_lwork.f')],
                         extra_info=lapack_opt)

    # _solve_toeplitz:
    config.add_extension('_solve_toeplitz',
                         sources=[('_solve_toeplitz.c')],
                         include_dirs=[get_numpy_include_dirs()])

    config.add_data_dir('tests')

    # Cython BLAS/LAPACK
    config.add_data_files('cython_blas.pxd')
    config.add_data_files('cython_lapack.pxd')

    sources = ['_blas_subroutine_wrappers.f', '_lapack_subroutine_wrappers.f']
    sources += get_g77_abi_wrappers(lapack_opt)
    sources += get_sgemv_fix(lapack_opt)
    includes = numpy_info().get_include_dirs()
    config.add_library('fwrappers', sources=sources, include_dirs=includes)

    config.add_extension('cython_blas',
                         sources=['cython_blas.c'],
                         depends=[
                             'cython_blas.pyx', 'cython_blas.pxd',
                             'fortran_defs.h', '_blas_subroutines.h'
                         ],
                         include_dirs=['.'],
                         libraries=['fwrappers'],
                         extra_info=lapack_opt)

    config.add_extension('cython_lapack',
                         sources=['cython_lapack.c'],
                         depends=[
                             'cython_lapack.pyx', 'cython_lapack.pxd',
                             'fortran_defs.h', '_lapack_subroutines.h'
                         ],
                         include_dirs=['.'],
                         libraries=['fwrappers'],
                         extra_info=lapack_opt)

    config.add_extension('_decomp_update', sources=['_decomp_update.c'])

    return config
Exemple #5
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def configuration(parent_package='',top_path=None):
    from numpy.distutils.system_info import get_info, NotFoundError
    from numpy.distutils.misc_util import Configuration, get_numpy_include_dirs
    from scipy._build_utils import get_sgemv_fix, get_g77_abi_wrappers, split_fortran_files

    config = Configuration('linalg',parent_package,top_path)

    lapack_opt = get_info('lapack_opt')

    if not lapack_opt:
        raise NotFoundError('no lapack/blas resources found')

    atlas_version = ([v[3:-3] for k,v in lapack_opt.get('define_macros',[])
                      if k == 'ATLAS_INFO']+[None])[0]
    if atlas_version:
        print(('ATLAS version: %s' % atlas_version))

    # fblas:
    sources = ['fblas.pyf.src']
    sources += get_g77_abi_wrappers(lapack_opt)
    sources += get_sgemv_fix(lapack_opt)

    config.add_extension('_fblas',
                         sources=sources,
                         depends=['fblas_l?.pyf.src'],
                         extra_info=lapack_opt
                         )

    # flapack:
    sources = ['flapack.pyf.src']
    sources += get_g77_abi_wrappers(lapack_opt)

    config.add_extension('_flapack',
                         sources=sources,
                         depends=['flapack_user.pyf.src'],
                         extra_info=lapack_opt
                         )

    if atlas_version is not None:
        # cblas:
        config.add_extension('_cblas',
                             sources=['cblas.pyf.src'],
                             depends=['cblas.pyf.src', 'cblas_l1.pyf.src'],
                             extra_info=lapack_opt
                             )

        # clapack:
        config.add_extension('_clapack',
                             sources=['clapack.pyf.src'],
                             depends=['clapack.pyf.src'],
                             extra_info=lapack_opt
                             )

    # _flinalg:
    config.add_extension('_flinalg',
                         sources=[join('src','det.f'),join('src','lu.f')],
                         extra_info=lapack_opt
                         )

    # _interpolative:
    routines_to_split = [
        'dfftb1',
        'dfftf1',
        'dffti1',
        'dsint1',
        'dzfft1',
        'id_srand',
        'idd_copyints',
        'idd_id2svd0',
        'idd_pairsamps',
        'idd_permute',
        'idd_permuter',
        'idd_random_transf0',
        'idd_random_transf0_inv',
        'idd_random_transf_init0',
        'idd_subselect',
        'iddp_asvd0',
        'iddp_rsvd0',
        'iddr_asvd0',
        'iddr_rsvd0',
        'idz_estrank0',
        'idz_id2svd0',
        'idz_permute',
        'idz_permuter',
        'idz_random_transf0_inv',
        'idz_random_transf_init0',
        'idz_random_transf_init00',
        'idz_realcomp',
        'idz_realcomplex',
        'idz_reco',
        'idz_subselect',
        'idzp_aid0',
        'idzp_aid1',
        'idzp_asvd0',
        'idzp_rsvd0',
        'idzr_asvd0',
        'idzr_reco',
        'idzr_rsvd0',
        'zfftb1',
        'zfftf1',
        'zffti1',
    ]
    print('Splitting linalg.interpolative Fortran source files')
    fnames = split_fortran_files(join(os.path.split(
                                          os.path.abspath(__file__))[0],
                                      'src', 'id_dist', 'src'),
                                 routines_to_split)
    fnames = [join('src', 'id_dist', 'src', f) for f in fnames]
    config.add_extension('_interpolative', fnames + ["interpolative.pyf"],
                         extra_info=lapack_opt
                         )

    # _calc_lwork:
    config.add_extension('_calc_lwork',
                         [join('src', 'calc_lwork.f')],
                         extra_info=lapack_opt)

    # _solve_toeplitz:
    config.add_extension('_solve_toeplitz',
                         sources=[('_solve_toeplitz.c')],
                         include_dirs=[get_numpy_include_dirs()])

    config.add_data_dir('tests')
    config.add_data_dir('benchmarks')
    return config
Exemple #6
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def configuration(parent_package='', top_path=None):
    from numpy.distutils.system_info import get_info, NotFoundError
    from numpy.distutils.misc_util import Configuration
    from scipy._build_utils import get_sgemv_fix, get_g77_abi_wrappers, split_fortran_files

    config = Configuration('linalg', parent_package, top_path)

    lapack_opt = get_info('lapack_opt')

    if not lapack_opt:
        raise NotFoundError('no lapack/blas resources found')

    atlas_version = ([
        v[3:-3]
        for k, v in lapack_opt.get('define_macros', []) if k == 'ATLAS_INFO'
    ] + [None])[0]
    if atlas_version:
        print(('ATLAS version: %s' % atlas_version))

    # fblas:
    sources = ['fblas.pyf.src']
    sources += get_g77_abi_wrappers(lapack_opt)
    sources += get_sgemv_fix(lapack_opt)

    config.add_extension('_fblas',
                         sources=sources,
                         depends=['fblas_l?.pyf.src'],
                         extra_info=lapack_opt)

    # flapack:
    sources = ['flapack.pyf.src']
    sources += get_g77_abi_wrappers(lapack_opt)

    config.add_extension('_flapack',
                         sources=sources,
                         depends=['flapack_user.pyf.src'],
                         extra_info=lapack_opt)

    if atlas_version is not None:
        # cblas:
        config.add_extension('_cblas',
                             sources=['cblas.pyf.src'],
                             depends=['cblas.pyf.src', 'cblas_l1.pyf.src'],
                             extra_info=lapack_opt)

        # clapack:
        config.add_extension('_clapack',
                             sources=['clapack.pyf.src'],
                             depends=['clapack.pyf.src'],
                             extra_info=lapack_opt)

    # _flinalg:
    config.add_extension('_flinalg',
                         sources=[join('src', 'det.f'),
                                  join('src', 'lu.f')],
                         extra_info=lapack_opt)

    # _interpolative:
    routines_to_split = [
        'dfftb1',
        'dfftf1',
        'dffti1',
        'dsint1',
        'dzfft1',
        'id_srand',
        'idd_copyints',
        'idd_id2svd0',
        'idd_pairsamps',
        'idd_permute',
        'idd_permuter',
        'idd_random_transf0',
        'idd_random_transf0_inv',
        'idd_random_transf_init0',
        'idd_subselect',
        'iddp_asvd0',
        'iddp_rsvd0',
        'iddr_asvd0',
        'iddr_rsvd0',
        'idz_estrank0',
        'idz_id2svd0',
        'idz_permute',
        'idz_permuter',
        'idz_random_transf0_inv',
        'idz_random_transf_init0',
        'idz_random_transf_init00',
        'idz_realcomp',
        'idz_realcomplex',
        'idz_reco',
        'idz_subselect',
        'idzp_aid0',
        'idzp_aid1',
        'idzp_asvd0',
        'idzp_rsvd0',
        'idzr_asvd0',
        'idzr_reco',
        'idzr_rsvd0',
        'zfftb1',
        'zfftf1',
        'zffti1',
    ]
    print('Splitting linalg.interpolative Fortran source files')
    fnames = split_fortran_files(
        join(
            os.path.split(os.path.abspath(__file__))[0], 'src', 'id_dist',
            'src'), routines_to_split)
    fnames = [join('src', 'id_dist', 'src', f) for f in fnames]
    config.add_extension('_interpolative',
                         fnames + ["interpolative.pyf"],
                         extra_info=lapack_opt)

    config.add_data_dir('tests')
    config.add_data_dir('benchmarks')
    return config
Exemple #7
0
def configuration(parent_package="", top_path=None):
    from distutils.sysconfig import get_python_inc
    from numpy.distutils.system_info import get_info, NotFoundError, numpy_info
    from numpy.distutils.misc_util import Configuration, get_numpy_include_dirs
    from scipy._build_utils import get_sgemv_fix, get_g77_abi_wrappers, split_fortran_files

    config = Configuration("linalg", parent_package, top_path)

    lapack_opt = get_info("lapack_opt")

    if not lapack_opt:
        raise NotFoundError("no lapack/blas resources found")

    atlas_version = ([v[3:-3] for k, v in lapack_opt.get("define_macros", []) if k == "ATLAS_INFO"] + [None])[0]
    if atlas_version:
        print(("ATLAS version: %s" % atlas_version))

    # fblas:
    sources = ["fblas.pyf.src"]
    sources += get_g77_abi_wrappers(lapack_opt)
    sources += get_sgemv_fix(lapack_opt)

    config.add_extension("_fblas", sources=sources, depends=["fblas_l?.pyf.src"], extra_info=lapack_opt)

    # flapack:
    sources = ["flapack.pyf.src"]
    sources += get_g77_abi_wrappers(lapack_opt)

    config.add_extension("_flapack", sources=sources, depends=["flapack_user.pyf.src"], extra_info=lapack_opt)

    if atlas_version is not None:
        # cblas:
        config.add_extension(
            "_cblas", sources=["cblas.pyf.src"], depends=["cblas.pyf.src", "cblas_l1.pyf.src"], extra_info=lapack_opt
        )

        # clapack:
        config.add_extension(
            "_clapack", sources=["clapack.pyf.src"], depends=["clapack.pyf.src"], extra_info=lapack_opt
        )

    # _flinalg:
    config.add_extension("_flinalg", sources=[join("src", "det.f"), join("src", "lu.f")], extra_info=lapack_opt)

    # _interpolative:
    routines_to_split = [
        "dfftb1",
        "dfftf1",
        "dffti1",
        "dsint1",
        "dzfft1",
        "id_srand",
        "idd_copyints",
        "idd_id2svd0",
        "idd_pairsamps",
        "idd_permute",
        "idd_permuter",
        "idd_random_transf0",
        "idd_random_transf0_inv",
        "idd_random_transf_init0",
        "idd_subselect",
        "iddp_asvd0",
        "iddp_rsvd0",
        "iddr_asvd0",
        "iddr_rsvd0",
        "idz_estrank0",
        "idz_id2svd0",
        "idz_permute",
        "idz_permuter",
        "idz_random_transf0_inv",
        "idz_random_transf_init0",
        "idz_random_transf_init00",
        "idz_realcomp",
        "idz_realcomplex",
        "idz_reco",
        "idz_subselect",
        "idzp_aid0",
        "idzp_aid1",
        "idzp_asvd0",
        "idzp_rsvd0",
        "idzr_asvd0",
        "idzr_reco",
        "idzr_rsvd0",
        "zfftb1",
        "zfftf1",
        "zffti1",
    ]
    print("Splitting linalg.interpolative Fortran source files")
    dirname = os.path.split(os.path.abspath(__file__))[0]
    fnames = split_fortran_files(join(dirname, "src", "id_dist", "src"), routines_to_split)
    fnames = [join("src", "id_dist", "src", f) for f in fnames]
    config.add_extension("_interpolative", fnames + ["interpolative.pyf"], extra_info=lapack_opt)

    # _calc_lwork:
    config.add_extension("_calc_lwork", [join("src", "calc_lwork.f")], extra_info=lapack_opt)

    # _solve_toeplitz:
    config.add_extension("_solve_toeplitz", sources=[("_solve_toeplitz.c")], include_dirs=[get_numpy_include_dirs()])

    config.add_data_dir("tests")

    # Cython BLAS/LAPACK
    config.add_data_files("cython_blas.pxd")
    config.add_data_files("cython_lapack.pxd")

    sources = ["_blas_subroutine_wrappers.f", "_lapack_subroutine_wrappers.f"]
    sources += get_g77_abi_wrappers(lapack_opt)
    sources += get_sgemv_fix(lapack_opt)
    includes = numpy_info().get_include_dirs() + [get_python_inc()]
    config.add_library("fwrappers", sources=sources, include_dirs=includes)

    config.add_extension(
        "cython_blas",
        sources=["cython_blas.c"],
        depends=["cython_blas.pyx", "cython_blas.pxd", "fortran_defs.h", "_blas_subroutines.h"],
        include_dirs=["."],
        libraries=["fwrappers"],
        extra_info=lapack_opt,
    )

    config.add_extension(
        "cython_lapack",
        sources=["cython_lapack.c"],
        depends=["cython_lapack.pyx", "cython_lapack.pxd", "fortran_defs.h", "_lapack_subroutines.h"],
        include_dirs=["."],
        libraries=["fwrappers"],
        extra_info=lapack_opt,
    )

    config.add_extension("_decomp_update", sources=["_decomp_update.c"])

    return config