def __init__(self, match_conf, dir_path):
self.series1 = []
for s1 in match_conf.series1.series:
fn1 = os.path.join(dir_path, s1.name + '.new')
if os.path.isfile(fn1):
self.series1.append(
Series.read(fn1, name=s1.name + '-tuned', col1=1, col2=2))
match_file = os.path.join(dir_path, match_conf.matchfile)
if os.path.isfile(match_file):
self.match = Series.read(match_file,
name=os.path.basename(dir_path) + '-rel',
col1=1,
col2=3)
def read_data(self, role, parameter, filename, base_dir=None):
"""Read a data series.
Read a data series (record or target curve) into Scoter.
Args:
role: 0 for record, 1 for target
parameter: 0 for d18O, 1 for RPI
filename: path to data file
If a filename of "" is supplied, read_data will ignore
it and return with no error.
base_dir: base directory used to resolve filename if it
is a relative path
"""
assert (0 <= role <= 1)
assert (0 <= parameter <= 1)
param_name = ("d18o", "rpi")[parameter]
if os.path.isabs(filename):
full_path = filename
else:
if base_dir is None:
return
full_path = os.path.join(base_dir, filename)
if full_path != "" and os.path.isfile(full_path):
logger.debug("Reading file: %d %d %s" %
(role, parameter, full_path))
self.filenames[role][parameter] = full_path
self.series[role][parameter] = Series.read(full_path,
parameter=param_name)