def proxy_request(project_id,
uuid,
data,
args,
headers,
method,
action,
dry_run=False):
node = get_node(project_id, uuid)
check_action_allowed_in_state(action, node.file_state)
file_record = get_file_record(uuid)
if dry_run:
message = (
"Transaction would have been successful. User selected dry run"
" option; transaction aborted, no data written to object storage.")
return flask.Response(json.dumps({"message": message}), status=200)
if action in ["upload", "initiate_multipart"]:
update_state(node, UPLOADING_STATE)
elif action == "abort_multipart":
update_state(node, submitted_state())
if action not in [
"upload", "upload_part", "complete_multipart", "reassign"
]:
data = ""
if action == "reassign":
try:
# data.read() works like a file pointer.
# When you .read() again it will be pointing at the end of the stream
json_data = data.read()
# if it comes in as a string, convert it to dict
if not isinstance(json_data, dict):
json_data = json.loads(json_data)
new_url = json_data["s3_url"]
except Exception:
message = "Unable to parse json. Use the format {'s3_url':'s3/://...'}"
return flask.Response(json.dumps({"message": message}), status=400)
update_file_record_url(file_record, s3_url=new_url)
update_state(node, SUCCESS_STATE)
message = "URL successfully reassigned. New url: {}".format(new_url)
return flask.Response(json.dumps({"message": message}), status=200)
resp = s3.make_s3_request(project_id, uuid, data, args, headers, method,
action)
if action in ["upload", "complete_multipart"]:
if resp.status == 200:
update_file_record_url(file_record, project_id + "/" + uuid)
update_state(node, SUCCESS_STATE)
if action == "delete":
if resp.status == 204:
update_state(node, submitted_state())
update_file_record_url(file_record, None)
return resp
def proxy_request(project_id,
uuid,
data,
args,
headers,
method,
action,
dry_run=False):
node = get_node(project_id, uuid)
check_action_allowed_in_state(action, node.file_state)
signpost_obj = get_signpost(uuid)
if dry_run:
message = (
'Transaction would have been successful. User selected dry run'
' option; transaction aborted, no data written to object storage.')
return flask.Response(json.dumps({'message': message}), status=200)
if action in ['upload', 'initiate_multipart']:
update_state(node, UPLOADING_STATE)
elif action == 'abort_multipart':
update_state(node, submitted_state())
if action not in [
'upload', 'upload_part', 'complete_multipart', 'reassign'
]:
data = ''
if action == 'reassign':
try:
# data.read() works like a file pointer.
# When you .read() again it will be pointing at the end of the stream
json_data = data.read()
# if it comes in as a string, convert it to dict
if not isinstance(json_data, dict):
json_data = json.loads(json_data)
new_url = json_data['s3_url']
except Exception:
message = 'Unable to parse json. Use the format {\'s3_url\':\'s3/://...\'}'
return flask.Response(json.dumps({'message': message}), status=400)
update_signpost_url(signpost_obj, s3_url=new_url)
update_state(node, SUCCESS_STATE)
message = ('URL successfully reassigned. New url: {}'.format(new_url))
return flask.Response(json.dumps({'message': message}), status=200)
resp = s3.make_s3_request(project_id, uuid, data, args, headers, method,
action)
if action in ['upload', 'complete_multipart']:
if resp.status == 200:
update_signpost_url(signpost_obj, project_id + '/' + uuid)
update_state(node, SUCCESS_STATE)
if action == 'delete':
if resp.status == 204:
update_state(node, submitted_state())
update_signpost_url(signpost_obj, None)
return resp
def proxy_request(project_id,
uuid,
data,
args,
headers,
method,
action,
dry_run=False):
node = get_node(project_id, uuid)
check_action_allowed_in_state(action, node.file_state)
signpost_obj = get_signpost(uuid)
if dry_run:
message = (
'Transaction would have been successful. User selected dry run'
' option; transaction aborted, no data written to object storage.')
return flask.Response(json.dumps({'message': message}), status=200)
if action in ['upload', 'initiate_multipart']:
update_state(node, UPLOADING_STATE)
elif action == 'abort_multipart':
update_state(node, submitted_state())
if action not in ['upload', 'upload_part', 'complete_multipart']:
data = ''
resp = s3.make_s3_request(project_id, uuid, data, args, headers, method,
action)
if action in ['upload', 'complete_multipart']:
if resp.status == 200:
update_signpost_url(signpost_obj, project_id + '/' + uuid)
update_state(node, SUCCESS_STATE)
if action == 'delete':
if resp.status == 204:
update_state(node, submitted_state())
update_signpost_url(signpost_obj, None)
return resp
SUCCESS_STATE,
ERROR_STATE,
UPLOADING_PARTS,
)
from sheepdog.utils.transforms.graph_to_doc import (
entity_to_template,
entity_to_template_delimited,
entity_to_template_json,
entity_to_template_str,
get_node_category,
)
from . import parse
from . import s3
from . import scheduling
ALLOWED_STATES = [ERROR_STATE, submitted_state(), UPLOADING_STATE]
def _get_links(file_format, schema, exclude_id):
"""
Parse links from schema.
we don't have project specific schema now
so right now this uses top level schema
TODO
"""
links = dict()
subgroups = [link for link in schema if "subgroup" in link]
non_subgroups = [link for link in schema if "name" in link]
for link in non_subgroups:
from sheepdog.auth import get_program_project_roles
from sheepdog.globals import (
submitted_state,
ALLOWED_DELETION_STATES,
)
from sheepdog.transactions.entity_base import EntityBase, EntityErrors
from sheepdog.transactions.transaction_base import MissingNode
ALLOWED_DELETION_FILE_STATES = [submitted_state(), None]
class DeletionEntity(EntityBase):
def __init__(self, transaction, node):
super(DeletionEntity, self).__init__(transaction, node)
self.action = 'delete'
self.dependents = {
# entity.node.node_id: entity
}
if isinstance(node, MissingNode):
self.neighbors = ()
return
self.neighbors = (edge.src for edge in node.edges_in)
# Check user permissions for deleting nodes
roles = get_program_project_roles(
*self.transaction.project_id.split('-', 1))
if 'delete' not in roles:
self.record_error(
'You do not have delete permission for project {}'.format(
