def test_best_complementarity_case5(self):
seq1 = 'cttggaacttctggtacat'
seq2 = 'tgtaccagaagttccaagccg'
result = validators.best_complementarity(seq1, seq2)
self.assertEqual(
result,
('cttggaacttctggtacat', 'tgtaccagaagttccaagccg', -3, 1)
)
def test_best_complementarity_case9(self):
seq1 = 'cttggaacttctggtacatag'
seq2 = 'tagtaccagaagttccaagcc'
result = validators.best_complementarity(seq1, seq2)
self.assertEqual(
result,
('cttggaacttctggtacatag', 'tagtaccagaagttccaagcc', -2, 2)
)
def test_best_complementarity_case2(self):
seq1 = 'cttggaacttctggtacat'
seq2 = 'gtaccagaagttccaagccgt'
result = validators.best_complementarity(seq1, seq2)
self.assertEqual(
result,
(seq1, seq2, -4, 2)
)
def test_best_complementarity_case34(self):
seq1 = 'gcacggcttggaacttctggt'
seq2 = 'gtaccagaagttccaagcc'
result = validators.best_complementarity(seq1, seq2)
self.assertEqual(
result,
('gcacggcttggaacttctggt', 'gtaccagaagttccaagcc', 4, -2)
)
def test_best_complementarity_case28(self):
seq1 = 'acggcttggaacttctggta'
seq2 = 'gtaccagaagttccaagcc'
result = validators.best_complementarity(seq1, seq2)
self.assertEqual(
result,
('acggcttggaacttctggta', 'gtaccagaagttccaagcc', 2, -1)
)
def test_best_complementarity_case26(self):
seq1 = 'acggcttggaacttctggt'
seq2 = 'agtaccagaagttccaagccg'
result = validators.best_complementarity(seq1, seq2)
self.assertEqual(
result,
('acggcttggaacttctggt', 'agtaccagaagttccaagccg', 1, -3)
)
def test_best_complementarity_case1(self):
seq1 = 'acggcttGGaactuctggtac'
seq2 = 'gtaccagaagttccaagccgt'
result = validators.best_complementarity(seq1, seq2)
self.assertEqual(
result,
(seq1, seq2, 0, 0) # new result
)
def test_best_complementarity_case18(self):
seq1 = 'acggcttggaacttctggtac'
seq2 = 'taccagaagttccaagccgt'
result = validators.best_complementarity(seq1, seq2)
self.assertEqual(
result,
('acggcttggaacttctggtac', 'taccagaagttccaagccgt', 0, 1)
)
def test_best_complementarity_case12(self):
seq1 = 'cttggaacttctggtacatgc'
seq2 = 'tgtaccagaagttccaagc'
result = validators.best_complementarity(seq1, seq2)
self.assertEqual(
result,
('cttggaacttctggtacatgc', 'tgtaccagaagttccaagc', -1, 3)
)
