def setupLayoutWidget(self): self.layoutWidget = qt.QWidget() self.layoutWidget.setLayout(qt.QHBoxLayout()) layoutWidget = slicer.qMRMLLayoutWidget() layoutManager = slicer.qSlicerLayoutManager() layoutManager.setMRMLScene(slicer.mrmlScene) layoutManager.setScriptedDisplayableManagerDirectory(slicer.app.slicerHome + "/bin/Python/mrmlDisplayableManager") layoutWidget.setLayoutManager(layoutManager) slicer.app.setLayoutManager(layoutManager) layoutWidget.setLayout(slicer.vtkMRMLLayoutNode.SlicerLayoutFourUpView) self.layoutWidget.layout().addWidget(layoutWidget)
def setupLayoutWidget(self): self.layoutWidget = qt.QWidget() self.layoutWidget.setLayout(qt.QHBoxLayout()) layoutWidget = slicer.qMRMLLayoutWidget() layoutManager = slicer.qSlicerLayoutManager() layoutManager.setMRMLScene(slicer.mrmlScene) layoutManager.setScriptedDisplayableManagerDirectory(slicer.app.slicerHome + "/bin/Python/mrmlDisplayableManager") layoutWidget.setLayoutManager(layoutManager) slicer.app.setLayoutManager(layoutManager) layoutWidget.setLayout(slicer.vtkMRMLLayoutNode.SlicerLayoutFourUpView) self.layoutWidget.layout().addWidget(layoutWidget)
def __init__(self, parent, developerMode=False, widgetClass=None):
VTKObservationMixin.__init__(self)
# Set up main frame
self.parent = parent
self.parent.setLayout(qt.QHBoxLayout())
self.layout = self.parent.layout()
self.layout.setMargin(0)
self.layout.setSpacing(0)
self.sliceletPanel = qt.QFrame(self.parent)
self.sliceletPanelLayout = qt.QVBoxLayout(self.sliceletPanel)
self.sliceletPanelLayout.setMargin(4)
self.sliceletPanelLayout.setSpacing(0)
self.layout.addWidget(self.sliceletPanel,1)
#Set Advanced Parameters Collapsible Button
self.parametersCollapsibleButton = ctk.ctkCollapsibleButton()
self.parametersCollapsibleButton.text = "Set Advanced Segmentation Parameters"
self.parametersCollapsibleButton.collapsed = True
self.sliceletPanelLayout.addWidget(self.parametersCollapsibleButton)
# Layout within the collapsible button
self.parametersLayout = qt.QFormLayout(self.parametersCollapsibleButton)
# Set Minimum Threshold of Percentage Increase to First Post-Contrast Image
self.inputMinimumThreshold = qt.QLabel("Minimum Threshold of Increase", self.parametersCollapsibleButton)
self.inputMinimumThreshold.setToolTip('Minimum Threshold of Percentage Increase (Pre- to First Post-contrast (Range: 10% to 150%)')
self.inputSelectorMinimumThreshold = qt.QDoubleSpinBox(self.parametersCollapsibleButton)
self.inputSelectorMinimumThreshold.setSuffix("%")
self.inputSelectorMinimumThreshold.singleStep = (1)
self.inputSelectorMinimumThreshold.minimum = (10)
self.inputSelectorMinimumThreshold.maximum = (150)
self.inputSelectorMinimumThreshold.value = (75)
self.inputSelectorMinimumThreshold.setToolTip('Minimum Threshold of Percentage Increase (Pre- to First Post-contrast (Range: 10% to 150%)')
self.parametersLayout.addRow(self.inputMinimumThreshold, self.inputSelectorMinimumThreshold)
# Curve 1 Type Parameters (Slopes from First to Fourth Post-Contrast Images)
self.inputCurve1 = qt.QLabel("Type 1 (Persistent) Curve Minimum Slope", self.parametersCollapsibleButton)
self.inputCurve1.setToolTip('Minimum Slope of Delayed Curve to classify as Persistent (Range: 0.02 to 0.3)')
self.inputSelectorCurve1 = qt.QDoubleSpinBox(self.parametersCollapsibleButton)
self.inputSelectorCurve1.singleStep = (0.02)
self.inputSelectorCurve1.minimum = (0.02)
self.inputSelectorCurve1.maximum = (0.30)
self.inputSelectorCurve1.value = (0.20)
self.inputSelectorCurve1.setToolTip('Minimum Slope of Delayed Curve to classify as Persistent (Range: 0.02 to 0.3)')
self.parametersLayout.addRow(self.inputCurve1, self.inputSelectorCurve1)
# Curve 3 Type Parameters (Slopes from First to Fourth Post-Contrast Images)
self.inputCurve3 = qt.QLabel("Type 3 (Washout) Curve Maximum Slope", self.parametersCollapsibleButton)
self.inputCurve3.setToolTip('Maximum Slope of Delayed Curve to classify as Washout (Range: -0.02 to -0.3)')
self.inputSelectorCurve3 = qt.QDoubleSpinBox(self.parametersCollapsibleButton)
self.inputSelectorCurve3.singleStep = (0.02)
self.inputSelectorCurve3.setPrefix("-")
self.inputSelectorCurve3.minimum = (0.02)
self.inputSelectorCurve3.maximum = (0.30)
self.inputSelectorCurve3.value = (0.20)
self.inputSelectorCurve3.setToolTip('Maximum Slope of Delayed Curve to classify as Washout (Range: -0.02 to -0.3)')
self.parametersLayout.addRow(self.inputCurve3, self.inputSelectorCurve3)
# Path input for dicom data to analyze
self.inputPath = qt.QFileDialog()
self.inputPath.setFileMode(qt.QFileDialog.Directory)
self.sliceletPanelLayout.addWidget(self.inputPath)
self.inputPath.connect('accepted()', self.createLogic)
##############
self.layoutWidget = slicer.qMRMLLayoutWidget()
self.layoutWidget.setMRMLScene(slicer.mrmlScene)
self.layoutWidget.setLayout(slicer.vtkMRMLLayoutNode.SlicerLayoutOneUp3DView)
self.layout.addWidget(self.layoutWidget,2)
if widgetClass:
self.widget = widgetClass(self.parent)
self.parent.show()
def __init__(self, FrameParent):
self.currentMummyName = ""
self.currentExplanation = ""
self.frameParent = FrameParent
self.frameParent.setLayout(qt.QHBoxLayout())
self.layout = self.frameParent.layout()
self.layout.setMargin(0)
self.layout.setSpacing(0)
moduleDir = os.path.dirname(__file__)
uiPath = os.path.join(moduleDir, 'Resources', 'UI', 'MummyInterface.ui')
# Load widget from .ui file (created by Qt Designer)
self.uiWidget = slicer.util.loadUI(uiPath)
self.layout.addWidget(self.uiWidget)
self.ui = slicer.util.childWidgetVariables(self.uiWidget)
# keyboard "v" shows the control panel
shortcutShow = qt.QShortcut(self.frameParent)
shortcutShow.setKey(qt.QKeySequence("v"))
shortcutShow.connect('activated()', lambda: self.showPanel())
# keyboard "e" hides the control panel
shortcutHide = qt.QShortcut(self.frameParent)
shortcutHide.setKey(qt.QKeySequence("e"))
shortcutHide.connect('activated()', lambda: self.hidePanel())
# Add layout widget
self.layoutWidget = slicer.qMRMLLayoutWidget()
self.layoutWidget.setMRMLScene(slicer.mrmlScene)
self.frameParent.layout().addWidget(self.layoutWidget)
self.layoutWidget.setLayout(slicer.vtkMRMLLayoutNode.SlicerLayoutOneUp3DView)
self.threeDWidget = self.layoutWidget.layoutManager().threeDWidget(0)
self.threeDWidget.threeDController().setVisible(False)
self.threeDView = self.threeDWidget.threeDView()
# Set up the Volumen rendering
self.volRenLogic = slicer.modules.volumerendering.logic()
self.setupCustomPreset()
# Set the Default rendering method. They can be:
# - vtkMRMLCPURayCastVolumeRenderingDisplayNode (combobox: "VTK CPU Ray Casting" )
# - vtkMRMLGPURayCastVolumeRenderingDisplayNode (combobox: "VTK GPU Ray Casting" )
# - vtkMRMLMultiVolumeRenderingDisplayNode (combobox: "VTK Multi-Volume" )
self.volRenLogic.SetDefaultRenderingMethod("vtkMRMLGPURayCastVolumeRenderingDisplayNode")
# set up background color, box, label axis
self.setup3DView()
self.setupConnections()
# Show defaul mummy (Mummy1)
self.onLoadMummy1()
#Full screen
self.frameParent.showFullScreen()
self.frameParent.show()