def test_fio_dense(self):
self.create_path()
t1 = expr.arange((100, 100)).evaluate()
Assert.eq(expr.save(t1, "fiotest1", self.test_dir, False), True)
Assert.all_eq(t1.glom(), expr.load("fiotest1", self.test_dir, False).glom())
Assert.eq(expr.save(t1, "fiotest1", self.test_dir, True), True)
Assert.all_eq(t1.glom(), expr.load("fiotest1", self.test_dir, True).glom())
Assert.eq(expr.pickle(t1, "fiotest2", self.test_dir, False), True)
Assert.all_eq(t1.glom(), expr.unpickle("fiotest2", self.test_dir, False).glom())
Assert.eq(expr.pickle(t1, "fiotest2", self.test_dir, True), True)
Assert.all_eq(t1.glom(), expr.unpickle("fiotest2", self.test_dir, True).glom())
def test_fio_sparse(self):
self.create_path()
t1 = expr.sparse_rand((100, 100)).evaluate()
Assert.eq(expr.save(t1, "fiotest3", self.test_dir, False), True)
Assert.all_eq(t1.glom().todense(), expr.load("fiotest3", self.test_dir, False).glom().todense())
Assert.eq(expr.save(t1, "fiotest3", self.test_dir, True), True)
Assert.all_eq(t1.glom().todense(), expr.load("fiotest3", self.test_dir, True).glom().todense())
Assert.eq(expr.pickle(t1, "fiotest4", self.test_dir, False), True)
Assert.all_eq(t1.glom().todense(), expr.unpickle("fiotest4", self.test_dir, False).glom().todense())
Assert.eq(expr.pickle(t1, "fiotest4", self.test_dir, True), True)
Assert.all_eq(t1.glom().todense(), expr.unpickle("fiotest4", self.test_dir, True).glom().todense())
def test_fio_path(self):
self.create_path()
t1 = expr.randn(100, 100).evaluate()
expr.save(t1, "fiotest1", self.test_dir2, False)
expr.pickle(t1, "fiotest2", self.test_dir2, False)
Assert.all_eq(t1.glom(), expr.load("fiotest1", self.test_dir2, False).glom())
Assert.all_eq(t1.glom(), expr.unpickle("fiotest2", self.test_dir2, False).glom())
def profile2(self):
self.create_path()
t1 = expr.sparse_rand((10000, 10000)).evaluate()
time_a, a = util.timeit(lambda: expr.save(t1, "fiotest3", self.test_dir, False))
util.log_info('Save a %s sparse array in %s without zip', t1.shape, time_a)
time_a, a = util.timeit(lambda: expr.load("fiotest3", self.test_dir, False).evaluate())
util.log_info('Load a %s sparse array in %s without zip', t1.shape, time_a)
time_a, a = util.timeit(lambda: expr.save(t1, "fiotest3", self.test_dir, True))
util.log_info('Save a %s sparse array in %s with zip', t1.shape, time_a)
time_a, a = util.timeit(lambda: expr.load("fiotest3", self.test_dir, True).evaluate())
util.log_info('Load a %s sparse array in %s with zip', t1.shape, time_a)
time_a, a = util.timeit(lambda: expr.pickle(t1, "fiotest4", self.test_dir, False))
util.log_info('Pickle a %s sparse array in %s without zip', t1.shape, time_a)
time_a, a = util.timeit(lambda: expr.unpickle("fiotest4", self.test_dir, False).evaluate())
util.log_info('Unpickle a %s sparse array in %s without zip', t1.shape, time_a)
time_a, a = util.timeit(lambda: expr.pickle(t1, "fiotest4", self.test_dir, True))
util.log_info('Pickle a %s sparse array in %s with zip', t1.shape, time_a)
time_a, a = util.timeit(lambda: expr.unpickle("fiotest4", self.test_dir, True).evaluate())
util.log_info('Unpickle a %s sparse array in %s with zip', t1.shape, time_a)
def test_fio_partial_sparse(self):
self.create_path()
t1 = expr.sparse_rand((300, 300)).evaluate()
expr.save(t1, "fiotest_partial1", self.test_dir, False)
expr.pickle(t1, "fiotest_partial2", self.test_dir, False)
t2 = expr.load("fiotest_partial1", self.test_dir, False)
test_tiles = {}
for ex, v in t1.tiles.iteritems():
test_tiles[ex] = v.worker
test_tiles = expr.partial_load(test_tiles, "fiotest_partial1", self.test_dir, False)
for ex, v in test_tiles.iteritems():
t1.tiles[ex] = v
Assert.all_eq(t1.glom().todense(), t2.glom().todense())
test_tiles = {}
for ex, v in t1.tiles.iteritems():
test_tiles[ex] = v.worker
test_tiles = expr.partial_unpickle(test_tiles, "fiotest_partial2", self.test_dir, False)
for ex, v in test_tiles.iteritems():
t1.tiles[ex] = v
Assert.all_eq(t1.glom().todense(), t2.glom().todense())