# do_conversion(make_locus_data_backend_starter(nex_backend, 'go_graph', locus_ids),
# [Json2DataPerfDB(perf_session_maker, BioentityGraph, 'GO', locus_ids, name='convert.from_backend.go_graph', commit_interval=1000)])
#
# do_conversion(make_locus_data_backend_starter(nex_backend, 'protein_domain_graph', locus_ids),
# [Json2DataPerfDB(perf_session_maker, BioentityGraph, 'PROTEIN_DOMAIN', locus_ids, name='convert.from_backend.protein_domain_graph', commit_interval=1000)])
#
# do_conversion(make_locus_data_backend_starter(nex_backend, 'literature_graph', locus_ids),
# [Json2DataPerfDB(perf_session_maker, BioentityGraph, 'LITERATURE', locus_ids, name='convert.from_backend.literature_graph', commit_interval=1000)])
#
# do_conversion(make_locus_data_backend_starter(nex_backend, 'regulation_graph', locus_ids),
# [Json2DataPerfDB(perf_session_maker, BioentityGraph, 'REGULATION', locus_ids, name='convert.from_backend.regulation_graph', commit_interval=1000)])
#
# do_conversion(make_go_data_backend_starter(nex_backend, 'go_ontology_graph', go_ids),
# [Json2DataPerfDB(perf_session_maker, BioconceptGraph, 'GO_ONTOLOGY', go_ids, name='convert.from_backend.go_ontology_graph', commit_interval=1000)])
do_conversion(make_observable_data_backend_starter(nex_backend, 'phenotype_ontology_graph', [99]),
[Json2DataPerfDB(perf_session_maker, BioconceptGraph, 'PHENOTYPE_ONTOLOGY', [99],
name='convert.from_backend.phenotype_ontology_graph', commit_interval=1000, delete_untouched=False)])
# # ------------------------------------------ Perf2 ------------------------------------------
# perf_session_maker = prepare_schema_connection(perf, config.PERF_DBTYPE, 'sgd-db2.stanford.edu:1521', config.PERF_DBNAME, config.PERF_SCHEMA, config.PERF_DBUSER, config.PERF_DBPASS)
# perf_backend = PerfBackend(config.PERF_DBTYPE, 'sgd-db1.stanford.edu:1521', config.PERF_DBNAME, config.PERF_SCHEMA, config.PERF_DBUSER, config.PERF_DBPASS, None)
#
# do_conversion(make_locus_data_backend_starter(perf_backend, 'interaction_graph', locus_ids),
# [Json2DataPerfDB(perf_session_maker, BioentityGraph, 'INTERACTION', locus_ids, name='convert.from_backend.interaction_graph', commit_interval=1000)])
#
# do_conversion(make_locus_data_backend_starter(perf_backend, 'phenotype_graph', locus_ids),
# [Json2DataPerfDB(perf_session_maker, BioentityGraph, 'PHENOTYPE', locus_ids, name='convert.from_backend.phenotype_graph', commit_interval=1000)])
#
# do_conversion(make_locus_data_backend_starter(perf_backend, 'go_graph', locus_ids),
# [Json2DataPerfDB(perf_session_maker, BioentityGraph, 'GO', locus_ids, name='convert.from_backend.go_graph', commit_interval=1000)])
[Json2DataPerfDB(perf_session_maker, ReferenceDetails, 'LITERATURE', reference_ids, name='convert.from_backend.literature_details', commit_interval=1000, sure=True)])
# ------------------------------------------ Phenotype Perf ------------------------------------------
do_conversion(make_locus_data_backend_starter(nex_backend, 'phenotype_details', locus_ids),
[Json2DataPerfDB(perf_session_maker, BioentityDetails, 'PHENOTYPE', locus_ids, name='convert.from_backend.phenotype_details', commit_interval=1000, sure=True)])
do_conversion(make_phenotype_data_backend_starter(nex_backend, 'phenotype_details', phenotype_ids),
[Json2DataPerfDB(perf_session_maker, BioconceptDetails, 'PHENOTYPE_LOCUS', phenotype_ids, name='convert.from_backend.phenotype_details', commit_interval=1000, sure=True)])
do_conversion(make_reference_data_backend_starter(nex_backend, 'phenotype_details', reference_ids),
[Json2DataPerfDB(perf_session_maker, ReferenceDetails, 'PHENOTYPE', reference_ids, name='convert.from_backend.phenotype_details', commit_interval=1000, sure=True)])
do_conversion(make_chemical_data_backend_starter(nex_backend, 'phenotype_details', chemical_ids),
[Json2DataPerfDB(perf_session_maker, BioitemDetails, 'PHENOTYPE', chemical_ids, name='convert.from_backend.phenotype_details', commit_interval=1000, sure=True)])
do_conversion(make_observable_data_backend_starter(nex_backend, 'phenotype_details', observable_ids),
[Json2DataPerfDB(perf_session_maker, BioconceptDetails, 'OBSERVABLE_LOCUS', observable_ids, name='convert.from_backend.phenotype_details', commit_interval=1000, sure=True)])
do_conversion(make_observable_data_with_children_backend_starter(nex_backend, 'phenotype_details', observable_ids),
[Json2DataPerfDB(perf_session_maker, BioconceptDetails, 'OBSERVABLE_LOCUS_ALL_CHILDREN', observable_ids, name='convert.from_backend.phenotype_details', commit_interval=1000, sure=True)])
# ------------------------------------------ Literature Perf2 ------------------------------------------
perf_session_maker = prepare_schema_connection(perf, config.PERF_DBTYPE, 'sgd-db2.stanford.edu:1521', config.PERF_DBNAME, config.PERF_SCHEMA, config.PERF_DBUSER, config.PERF_DBPASS)
perf_backend = PerfBackend(config.PERF_DBTYPE, 'sgd-db1.stanford.edu:1521', config.PERF_DBNAME, config.PERF_SCHEMA, config.PERF_DBUSER, config.PERF_DBPASS, None)
do_conversion(make_locus_data_backend_starter(perf_backend, 'literature_details', locus_ids),
[Json2DataPerfDB(perf_session_maker, BioentityDetails, 'LITERATURE', locus_ids, name='convert.from_backend.literature_details', commit_interval=1000, sure=True)])
do_conversion(make_reference_data_backend_starter(perf_backend, 'literature_details', reference_ids),
[Json2DataPerfDB(perf_session_maker, ReferenceDetails, 'LITERATURE', reference_ids, name='convert.from_backend.literature_details', commit_interval=1000, sure=True)])
