Python split_entity_namespaces Exemples

Exemple #1

Fichier : unit_test_Entity.py Projet : tschaffter/synapsePythonClient

def test_split_entity_namespaces():
    """Test split_entity_namespaces"""

    e = {
        'concreteType': 'org.sagebionetworks.repo.model.Folder',
        'name': 'Henry',
        'color': 'blue',
        'foo': 1234,
        'parentId': 'syn1234'
    }
    (properties, annotations, local_state) = split_entity_namespaces(e)

    assert set(properties.keys()) == {'concreteType', 'name', 'parentId'}
    assert properties['name'] == 'Henry'
    assert set(annotations.keys()) == {'color', 'foo'}
    assert annotations['foo'] == 1234
    assert len(local_state) == 0

    e = {
        'concreteType': 'org.sagebionetworks.repo.model.FileEntity',
        'name': 'Henry',
        'color': 'blue',
        'foo': 1234,
        'parentId': 'syn1234',
        'dataFileHandleId': 54321,
        'cacheDir': '/foo/bar/bat',
        'files': ['foo.xyz'],
        'path': '/foo/bar/bat/foo.xyz'
    }
    (properties, annotations, local_state) = split_entity_namespaces(e)

    assert set(properties.keys()) == {
        'concreteType', 'name', 'parentId', 'dataFileHandleId'
    }
    assert properties['name'] == 'Henry'
    assert properties['dataFileHandleId'] == 54321
    assert set(annotations.keys()) == {'color', 'foo'}
    assert annotations['foo'] == 1234
    assert set(local_state.keys()) == {'cacheDir', 'files', 'path'}
    assert local_state['cacheDir'] == '/foo/bar/bat'

    f = Entity.create(properties, annotations, local_state)
    assert f.properties.dataFileHandleId == 54321
    assert f.properties.name == 'Henry'
    assert f.annotations.foo == 1234
    assert f.__dict__['cacheDir'] == '/foo/bar/bat'
    assert f.__dict__['path'] == '/foo/bar/bat/foo.xyz'

Exemple #2

Fichier : unit_test_Entity.py Projet : nickgros-sage/synapsePythonClient

def test_split_entity_namespaces():
    """Test split_entity_namespaces"""

    e = {
        'concreteType': 'org.sagebionetworks.repo.model.Folder',
        'name': 'Henry',
        'color': 'blue',
        'foo': 1234,
        'parentId': 'syn1234'
    }
    (properties, annotations, local_state) = split_entity_namespaces(e)

    assert_equals(set(properties.keys()), {'concreteType', 'name', 'parentId'})
    assert_equals(properties['name'], 'Henry')
    assert_equals(set(annotations.keys()), {'color', 'foo'})
    assert_equals(annotations['foo'], 1234)
    assert_equals(len(local_state), 0)

    e = {
        'concreteType': 'org.sagebionetworks.repo.model.FileEntity',
        'name': 'Henry',
        'color': 'blue',
        'foo': 1234,
        'parentId': 'syn1234',
        'dataFileHandleId': 54321,
        'cacheDir': '/foo/bar/bat',
        'files': ['foo.xyz'],
        'path': '/foo/bar/bat/foo.xyz'
    }
    (properties, annotations, local_state) = split_entity_namespaces(e)

    assert_equals(set(properties.keys()),
                  {'concreteType', 'name', 'parentId', 'dataFileHandleId'})
    assert_equals(properties['name'], 'Henry')
    assert_equals(properties['dataFileHandleId'], 54321)
    assert_equals(set(annotations.keys()), {'color', 'foo'})
    assert_equals(annotations['foo'], 1234)
    assert_equals(set(local_state.keys()), {'cacheDir', 'files', 'path'})
    assert_equals(local_state['cacheDir'], '/foo/bar/bat')

    f = Entity.create(properties, annotations, local_state)
    assert_equals(f.properties.dataFileHandleId, 54321)
    assert_equals(f.properties.name, 'Henry')
    assert_equals(f.annotations.foo, 1234)
    assert_equals(f.__dict__['cacheDir'], '/foo/bar/bat')
    assert_equals(f.__dict__['path'], '/foo/bar/bat/foo.xyz')

Exemple #3

Fichier : unit_test_tables.py Projet : Sage-Bionetworks/synapsePythonClient

def test_EntityViewSchema__ignore_column_names_set_info_preserved():
    """
    tests that ignoredAnnotationColumnNames will be preserved after creating a new EntityViewSchema from properties,
    local_state, and annotations
    """
    ignored_names = {'a', 'b', 'c'}
    entity_view = EntityViewSchema("someName", parent="syn123", ignoredAnnotationColumnNames={'a', 'b', 'c'})
    properties, annotations, local_state = split_entity_namespaces(entity_view)
    entity_view_copy = Entity.create(properties, annotations, local_state)
    assert_equals(ignored_names, entity_view.ignoredAnnotationColumnNames)
    assert_equals(ignored_names, entity_view_copy.ignoredAnnotationColumnNames)

Exemple #4

Fichier : unit_test_tables.py Projet : tschaffter/synapsePythonClient

def test_EntityViewSchema__ignore_column_names_set_info_preserved():
    """
    tests that ignoredAnnotationColumnNames will be preserved after creating a new EntityViewSchema from properties,
    local_state, and annotations
    """
    ignored_names = {'a', 'b', 'c'}
    entity_view = EntityViewSchema("someName", parent="syn123", ignoredAnnotationColumnNames={'a', 'b', 'c'})
    properties, annotations, local_state = split_entity_namespaces(entity_view)
    entity_view_copy = Entity.create(properties, annotations, local_state)
    assert ignored_names == entity_view.ignoredAnnotationColumnNames
    assert ignored_names == entity_view_copy.ignoredAnnotationColumnNames

Exemple #5

Fichier : unit_test_Entity.py Projet : brucehoff/synapsePythonClient

def test_split_entity_namespaces():
    """Test split_entity_namespaces"""

    e = {'concreteType':'org.sagebionetworks.repo.model.Folder',
         'name':'Henry',
         'color':'blue',
         'foo':1234,
         'parentId':'syn1234'}
    (properties,annotations,local_state) = split_entity_namespaces(e)

    assert set(properties.keys()) == set(['concreteType', 'name', 'parentId'])
    assert properties['name'] == 'Henry'
    assert set(annotations.keys()) == set(['color', 'foo'])
    assert annotations['foo'] == 1234
    assert len(local_state) == 0

    e = {'concreteType':'org.sagebionetworks.repo.model.FileEntity',
         'name':'Henry',
         'color':'blue',
         'foo':1234,
         'parentId':'syn1234',
         'dataFileHandleId':54321,
         'cacheDir':'/foo/bar/bat',
         'files':['foo.xyz'],
         'path':'/foo/bar/bat/foo.xyz'}
    (properties,annotations,local_state) = split_entity_namespaces(e)

    assert set(properties.keys()) == set(['concreteType', 'name', 'parentId', 'dataFileHandleId'])
    assert properties['name'] == 'Henry'
    assert properties['dataFileHandleId'] == 54321
    assert set(annotations.keys()) == set(['color', 'foo'])
    assert annotations['foo'] == 1234
    assert set(local_state.keys()) == set(['cacheDir', 'files', 'path'])
    assert local_state['cacheDir'] == '/foo/bar/bat'

    f = Entity.create(properties,annotations,local_state)
    assert f.properties.dataFileHandleId == 54321
    assert f.properties.name == 'Henry'
    assert f.annotations.foo == 1234
    assert f.__dict__['cacheDir'] == '/foo/bar/bat'
    assert f.__dict__['path'] == '/foo/bar/bat/foo.xyz'

Exemple #6

Fichier : unit_test_Entity.py Projet : Sage-Bionetworks/synapsePythonClient

def test_split_entity_namespaces():
    """Test split_entity_namespaces"""

    e = {'concreteType': 'org.sagebionetworks.repo.model.Folder',
         'name': 'Henry',
         'color': 'blue',
         'foo': 1234,
         'parentId': 'syn1234'}
    (properties, annotations, local_state) = split_entity_namespaces(e)

    assert_equals(set(properties.keys()), {'concreteType', 'name', 'parentId'})
    assert_equals(properties['name'], 'Henry')
    assert_equals(set(annotations.keys()), {'color', 'foo'})
    assert_equals(annotations['foo'], 1234)
    assert_equals(len(local_state), 0)

    e = {'concreteType': 'org.sagebionetworks.repo.model.FileEntity',
         'name': 'Henry',
         'color': 'blue',
         'foo': 1234,
         'parentId': 'syn1234',
         'dataFileHandleId': 54321,
         'cacheDir': '/foo/bar/bat',
         'files': ['foo.xyz'],
         'path': '/foo/bar/bat/foo.xyz'}
    (properties, annotations, local_state) = split_entity_namespaces(e)

    assert_equals(set(properties.keys()), {'concreteType', 'name', 'parentId', 'dataFileHandleId'})
    assert_equals(properties['name'], 'Henry')
    assert_equals(properties['dataFileHandleId'], 54321)
    assert_equals(set(annotations.keys()), {'color', 'foo'})
    assert_equals(annotations['foo'], 1234)
    assert_equals(set(local_state.keys()), {'cacheDir', 'files', 'path'})
    assert_equals(local_state['cacheDir'], '/foo/bar/bat')

    f = Entity.create(properties, annotations, local_state)
    assert_equals(f.properties.dataFileHandleId, 54321)
    assert_equals(f.properties.name, 'Henry')
    assert_equals(f.annotations.foo, 1234)
    assert_equals(f.__dict__['cacheDir'], '/foo/bar/bat')
    assert_equals(f.__dict__['path'], '/foo/bar/bat/foo.xyz')