def c_write_and_read_array(a, ref='chr1', start=0):
filename = "tmp.bedgraph"
with open(filename, 'w') as fileh:
c_array_to_bedgraph(a, ref, start, fileh)
a = bedgraph_to_array(open(filename))
os.remove(filename)
return a.get(ref, None)
def c_write_and_read_array(a, ref='chr1', start=0):
filename = "tmp.bedgraph"
with open(filename, 'w') as fileh:
c_array_to_bedgraph(a, ref, start, fileh)
a = bedgraph_to_array(open(filename))
os.remove(filename)
return a.get(ref, None)
def stmt2():
a = np.array(np.random.random(100000), dtype=FLOAT_DTYPE)
filename = "tmp.bedgraph"
with open(filename, 'w') as fileh:
c_array_to_bedgraph(a, ref='chr1', start=0, fileh=fileh)
os.remove(filename)
def stmt2():
a = np.array(np.random.random(100000), dtype=FLOAT_DTYPE)
filename = "tmp.bedgraph"
with open(filename, 'w') as fileh:
c_array_to_bedgraph(a, ref='chr1', start=0, fileh=fileh)
os.remove(filename)
