Exemple #1
0
    def setUp(self):
        from django.contrib.auth.models import User
        from tempfile import mkdtemp

        user = '******'
        pwd = 'secret'
        email = ''
        self.user = User.objects.create_user(user, email, pwd)

        self.test_dir = mkdtemp()

        self.exp = models.Experiment(
            title='test exp1',
            institution_name='monash',
            created_by=self.user,
        )
        self.exp.save()

        self.dataset = models.Dataset(description="dataset description...",
                                      experiment=self.exp)
        self.dataset.save()

        self.datafile = models.Dataset_File(dataset=self.dataset,\
            filename="testfile.txt", url="file://1/testfile.txt")

        self.datafile.save()

        self.schema = models.Schema(namespace="http://localhost/psmtest/df/",
                                    name="Parameter Set Manager",
                                    type=3)

        self.schema.save()

        self.parametername1 = models.ParameterName(schema=self.schema,
                                                   name="parameter1",
                                                   full_name="Parameter 1")

        self.parametername1.save()

        self.parametername2 = models.ParameterName(
            schema=self.schema,
            name="parameter2",
            full_name="Parameter 2",
            data_type=models.ParameterName.NUMERIC)

        self.parametername2.save()

        self.datafileparameterset = models.DatafileParameterSet(
            schema=self.schema, dataset_file=self.datafile)

        self.datafileparameterset.save()

        self.datafileparameter1 = models.DatafileParameter(
            parameterset=self.datafileparameterset,
            name=self.parametername1,
            string_value="test1")

        self.datafileparameter1.save()

        self.datafileparameter2 = models.DatafileParameter(
            parameterset=self.datafileparameterset,
            name=self.parametername2,
            numerical_value=2)

        self.datafileparameter2.save()
Exemple #2
0
    def test_parameter(self):
        from tardis.tardis_portal import models
        exp = models.Experiment(
            title='test exp1',
            institution_name='Australian Synchrotron',
            approved=True,
            created_by=self.user,
            public_access=models.Experiment.PUBLIC_ACCESS_NONE,
        )
        exp.save()

        dataset = models.Dataset(description="dataset description")
        dataset.save()
        dataset.experiments.add(exp)
        dataset.save()

        df_file = models.Dataset_File(
            dataset=dataset,
            filename='file.txt',
            url='path/file.txt',
        )
        df_file.save()

        df_schema = models.Schema(
            namespace='http://www.cern.ch/felzmann/schema1.xml',
            type=models.Schema.DATAFILE)
        df_schema.save()

        ds_schema = models.Schema(
            namespace='http://www.cern.ch/felzmann/schema2.xml',
            type=models.Schema.DATASET)
        ds_schema.save()

        exp_schema = models.Schema(
            namespace='http://www.cern.ch/felzmann/schema3.xml',
            type=models.Schema.EXPERIMENT)
        exp_schema.save()

        df_parname = models.ParameterName(
            schema=df_schema,
            name='name',
            full_name='full_name',
            units='image/jpg',
            data_type=models.ParameterName.FILENAME)
        df_parname.save()

        ds_parname = models.ParameterName(
            schema=ds_schema,
            name='name',
            full_name='full_name',
            units='image/jpg',
            data_type=models.ParameterName.FILENAME)
        ds_parname.save()

        exp_parname = models.ParameterName(
            schema=exp_schema,
            name='name',
            full_name='full_name',
            units='image/jpg',
            data_type=models.ParameterName.FILENAME)
        exp_parname.save()

        df_parset = models.DatafileParameterSet(schema=df_schema,
                                                dataset_file=df_file)
        df_parset.save()

        ds_parset = models.DatasetParameterSet(schema=ds_schema,
                                               dataset=dataset)
        ds_parset.save()

        exp_parset = models.ExperimentParameterSet(schema=exp_schema,
                                                   experiment=exp)
        exp_parset.save()

        from base64 import b64encode
        from os import path
        from os import remove

        filename = path.join(path.dirname(__file__), 'test.jpg')
        df_parameter = models.DatafileParameter(name=df_parname,
                                                parameterset=df_parset,
                                                string_value=b64encode(
                                                    open(filename).read()))
        df_parameter.save()

        ds_parameter = models.DatasetParameter(name=ds_parname,
                                               parameterset=ds_parset,
                                               string_value=b64encode(
                                                   open(filename).read()))
        ds_parameter.save()

        exp_parameter = models.ExperimentParameter(name=exp_parname,
                                                   parameterset=exp_parset,
                                                   string_value=b64encode(
                                                       open(filename).read()))
        exp_parameter.save()

        self.assertEqual(
            "<a href='/test/DatafileImage/load/%i/' target='_blank'><img src='/test/DatafileImage/load/%i/' /></a>"
            % (df_parameter.id, df_parameter.id), df_parameter.get())

        self.assertEqual(
            "<a href='/test/DatasetImage/load/%i/' target='_blank'><img src='/test/DatasetImage/load/%i/' /></a>"
            % (ds_parameter.id, ds_parameter.id), ds_parameter.get())

        self.assertEqual(
            "<a href='/test/ExperimentImage/load/%i/' target='_blank'><img src='/test/ExperimentImage/load/%i/' /></a>"
            % (exp_parameter.id, exp_parameter.id), exp_parameter.get())

        remove(path.join(settings.FILE_STORE_PATH, df_parameter.string_value))
        remove(path.join(settings.FILE_STORE_PATH, ds_parameter.string_value))
        remove(path.join(settings.FILE_STORE_PATH, exp_parameter.string_value))
Exemple #3
0
    def test_parameter(self):
        from tardis.tardis_portal import models
        exp = models.Experiment(
            title='test exp1',
            institution_name='Australian Synchrotron',
            approved=True,
            created_by=self.user,
            public_access=models.Experiment.PUBLIC_ACCESS_NONE,
        )
        exp.save()

        dataset = models.Dataset(description="dataset description")
        dataset.save()
        dataset.experiments.add(exp)
        dataset.save()

        df_file = models.DataFile(dataset=dataset,
                                  filename='file.txt',
                                  size=42,
                                  md5sum='bogus')
        df_file.save()

        df_schema = models.Schema(
            namespace='http://www.cern.ch/felzmann/schema1.xml',
            type=models.Schema.DATAFILE)
        df_schema.save()

        ds_schema = models.Schema(
            namespace='http://www.cern.ch/felzmann/schema2.xml',
            type=models.Schema.DATASET)
        ds_schema.save()

        exp_schema = models.Schema(
            namespace='http://www.cern.ch/felzmann/schema3.xml',
            type=models.Schema.EXPERIMENT)
        exp_schema.save()

        df_parname = models.ParameterName(
            schema=df_schema,
            name='name',
            full_name='full_name',
            units='image/jpg',
            data_type=models.ParameterName.FILENAME)
        df_parname.save()

        ds_parname = models.ParameterName(
            schema=ds_schema,
            name='name',
            full_name='full_name',
            units='image/jpg',
            data_type=models.ParameterName.FILENAME)
        ds_parname.save()

        exp_parname = models.ParameterName(
            schema=exp_schema,
            name='name',
            full_name='full_name',
            units='image/jpg',
            data_type=models.ParameterName.FILENAME)
        exp_parname.save()

        df_parset = models.DatafileParameterSet(schema=df_schema,
                                                datafile=df_file)
        df_parset.save()

        ds_parset = models.DatasetParameterSet(schema=ds_schema,
                                               dataset=dataset)
        ds_parset.save()

        exp_parset = models.ExperimentParameterSet(schema=exp_schema,
                                                   experiment=exp)
        exp_parset.save()

        from os import path
        with self.settings(METADATA_STORE_PATH=path.dirname(__file__)):
            filename = 'test.jpg'
            df_parameter = models.DatafileParameter(name=df_parname,
                                                    parameterset=df_parset,
                                                    string_value=filename)
            df_parameter.save()

            ds_parameter = models.DatasetParameter(name=ds_parname,
                                                   parameterset=ds_parset,
                                                   string_value=filename)
            ds_parameter.save()

            exp_parameter = models.ExperimentParameter(name=exp_parname,
                                                       parameterset=exp_parset,
                                                       string_value=filename)
            exp_parameter.save()

            self.assertEqual(
                "<a href='/display/DatafileImage/load/%i/' target='_blank'><img style='width: 300px;' src='/display/DatafileImage/load/%i/' /></a>"
                %  # noqa
                (df_parameter.id, df_parameter.id),
                df_parameter.get())

            self.assertEqual(
                "<a href='/display/DatasetImage/load/%i/' target='_blank'><img style='width: 300px;' src='/display/DatasetImage/load/%i/' /></a>"
                %  # noqa
                (ds_parameter.id, ds_parameter.id),
                ds_parameter.get())

            self.assertEqual(
                "<a href='/display/ExperimentImage/load/%i/' target='_blank'><img style='width: 300px;' src='/display/ExperimentImage/load/%i/' /></a>"
                %  # noqa
                (exp_parameter.id, exp_parameter.id),
                exp_parameter.get())