def test_simple_substitution_case(self): var_c = Variant(hgvs_c['SUB']) lex = LVG(var_c) query = GoogleQuery(lex) assert query.startswith( '"SCN5A" ("4786T>A"|"T4786A"|"4786T-->A"|"4786T/A"|"4786T->A"') assert query.find('4732T->A') > -1 assert query.find('4783T-->A') > -1
def test_dup_intronic(self): hgvs_text = "NM_000722.2:c.355-5dupT" lex = LVG(hgvs_text) query = GoogleQuery(lex) assert query.startswith( '"CACNA2D1" ("355-5dupT"|"355-5dup"|"355-14dupT"|"355-14dup"')