async def set_eligible(request):
client_key = general.get_request_key_header(request)
required_fields = ['id', 'eligible']
general.validate_fields(required_fields, request.json)
uid = request.json.get('id')
eligible = bool(request.json.get('eligible'))
client_signer = request.app.config.SIGNER_INVESTIGATOR # .get_public_key().as_hex()
client_txn = trial_transaction.set_eligible(txn_signer=client_signer,
batch_signer=client_signer,
uid=uid,
eligible=eligible)
batch, batch_id = trial_transaction.make_batch_and_id([client_txn],
client_signer)
await security_messaging.set_eligible(
request.app.config.INVESTIGATOR_VAL_CONN,
request.app.config.CONSENT_VAL_CONN, request.app.config.TIMEOUT,
[batch], client_key)
try:
await security_messaging.check_batch_status(
request.app.config.INVESTIGATOR_VAL_CONN, [batch_id])
except (ApiBadRequest, ApiInternalError) as err:
# await auth_query.remove_auth_entry(
# request.app.config.DB_CONN, request.json.get('email'))
raise err
return response.json(body={'status': general.DONE},
headers=general.get_response_headers())
async def get_all_clients(request):
"""Fetches complete details of all Accounts in state"""
investigator_pkey = request.app.config.SIGNER_INVESTIGATOR.get_public_key(
).as_hex()
clients = {'investigator': investigator_pkey}
return response.json(body={'data': clients},
headers=general.get_response_headers())
async def request_inform_consent(request, patient_pkey):
"""Updates auth information for the authorized account"""
client_key = general.get_request_key_header(request)
client_signer = general.get_signer(request, client_key)
grant_read_ehr_permission_txn = consent_transaction.request_inform_document_consent(
txn_signer=client_signer,
batch_signer=client_signer,
patient_pkey=patient_pkey)
batch, batch_id = trial_transaction.make_batch_and_id(
[grant_read_ehr_permission_txn], client_signer)
await security_messaging.request_inform_document_consent(
request.app.config.CONSENT_VAL_CONN, request.app.config.TIMEOUT,
[batch], client_key)
try:
await security_messaging.check_batch_status(
request.app.config.CONSENT_VAL_CONN, [batch_id])
except (ApiBadRequest, ApiInternalError) as err:
# await auth_query.remove_auth_entry(
# request.app.config.DB_CONN, request.json.get('email'))
raise err
return response.json(body={'status': general.DONE},
headers=general.get_response_headers())
async def get_screening_data(request):
"""Updates auth information for the authorized account"""
inc_excl_criteria = '?'
for criteria, value in request.raw_args.items():
LOGGER.debug('_match_incl_excl_criteria -> criteria: ' + criteria + '; value: ' + value + ';')
inc_excl_criteria = inc_excl_criteria + criteria + "=" + value + '&'
res_json = general.get_response_from_ehr(request, "/ehrs/pre_screening_data" + inc_excl_criteria)
# investigator_pkey = general.get_request_key_header(request)
# ehr_list = await security_messaging.get_pre_screening_data(request.app.config.EHR_VAL_CONN,
# investigator_pkey, request.raw_args)
ehr_list_json = []
for entity in res_json['data']:
ehr_list_json.append({
'id': entity['id'],
'client_pkey': entity['client_pkey'],
'height': entity['height'],
'weight': entity['weight'],
'A1C': entity['A1C'],
'FPG': entity['FPG'],
'OGTT': entity['OGTT'],
'RPGT': entity['RPGT'],
'event_time': entity['event_time'],
'name': entity['name'],
'surname': entity['surname']
})
return response.json(body={'data': ehr_list_json},
headers=general.get_response_headers())
async def register_investigator(request):
"""Updates auth information for the authorized account"""
required_fields = ['name']
general.validate_fields(required_fields, request.json)
name = request.json.get('name')
clinic_signer = request.app.config.SIGNER_INVESTIGATOR # .get_public_key().as_hex()
# Consent network
client_txn = consent_transaction.create_investigator_client(
txn_signer=clinic_signer, batch_signer=clinic_signer)
batch, batch_id = consent_transaction.make_batch_and_id([client_txn],
clinic_signer)
await security_messaging.add_investigator(
request.app.config.CONSENT_VAL_CONN, request.app.config.TIMEOUT,
[batch])
try:
await security_messaging.check_batch_status(
request.app.config.CONSENT_VAL_CONN, [batch_id])
except (ApiBadRequest, ApiInternalError) as err:
# await auth_query.remove_auth_entry(
# request.app.config.DB_CONN, request.json.get('email'))
raise err
# Trial network
clinic_txn = trial_transaction.create_investigator(
txn_signer=clinic_signer, batch_signer=clinic_signer, name=name)
batch, batch_id = trial_transaction.make_batch_and_id([clinic_txn],
clinic_signer)
await security_messaging.add_investigator(
request.app.config.INVESTIGATOR_VAL_CONN, request.app.config.TIMEOUT,
[batch])
try:
await security_messaging.check_batch_status(
request.app.config.INVESTIGATOR_VAL_CONN, [batch_id])
except (ApiBadRequest, ApiInternalError) as err:
# await auth_query.remove_auth_entry(
# request.app.config.DB_CONN, request.json.get('email'))
raise err
return response.json(body={'status': general.DONE},
headers=general.get_response_headers())
async def get_all_investigators(request):
"""Fetches complete details of all Accounts in state"""
client_key = general.get_request_key_header(request)
investigator_list = await security_messaging.get_investigators(
request.app.config.INVESTIGATOR_VAL_CONN,
request.app.config.CONSENT_VAL_CONN, client_key)
investigator_list_json = []
for address, dp in investigator_list.items():
investigator_list_json.append({
'public_key': dp.public_key,
'name': dp.name
})
return response.json(body={'data': investigator_list_json},
headers=general.get_response_headers())
async def update_data(request):
client_key = general.get_request_key_header(request)
required_fields = ['id', 'height', 'weight', 'A1C', 'FPG', 'OGTT', 'RPGT']
general.validate_fields(required_fields, request.json)
uid = request.json.get('id')
height = request.json.get('height')
weight = request.json.get('weight')
A1C = request.json.get('A1C')
FPG = request.json.get('FPG')
OGTT = request.json.get('OGTT')
RPGT = request.json.get('RPGT')
client_signer = request.app.config.SIGNER_INVESTIGATOR # .get_public_key().as_hex()
client_txn = trial_transaction.update_data(txn_signer=client_signer,
batch_signer=client_signer,
uid=uid,
height=height,
weight=weight,
a1c=A1C,
fpg=FPG,
ogtt=OGTT,
rpgt=RPGT)
batch, batch_id = trial_transaction.make_batch_and_id([client_txn],
client_signer)
await security_messaging.update_investigator(
request.app.config.INVESTIGATOR_VAL_CONN,
request.app.config.CONSENT_VAL_CONN, request.app.config.TIMEOUT,
[batch], client_key)
try:
await security_messaging.check_batch_status(
request.app.config.INVESTIGATOR_VAL_CONN, [batch_id])
except (ApiBadRequest, ApiInternalError) as err:
# await auth_query.remove_auth_entry(
# request.app.config.DB_CONN, request.json.get('email'))
raise err
return response.json(body={'status': general.DONE},
headers=general.get_response_headers())
async def import_screening_data(request, patient_pkey, ehr_id):
"""Updates auth information for the authorized account"""
res_json = general.get_response_from_ehr(
request, "/ehrs/" + patient_pkey + "/" + ehr_id)
investigator_pkey = general.get_request_key_header(request)
client_signer = general.get_signer(request, investigator_pkey)
data_json = res_json['data']
if not data_json:
raise ApiBadRequest("Can not retrieve '" + ehr_id + "' EHR ' for '" +
patient_pkey + "' patient")
data_txn = trial_transaction.add_data(txn_signer=client_signer,
batch_signer=client_signer,
uid=data_json['id'],
height=data_json['height'],
weight=data_json['weight'],
a1c=data_json['A1C'],
fpg=data_json['FPG'],
ogtt=data_json['OGTT'],
rpgt=data_json['RPGT'],
event_time=data_json['event_time'])
batch, batch_id = trial_transaction.make_batch_and_id([data_txn],
client_signer)
await security_messaging.import_screening_data(
request.app.config.INVESTIGATOR_VAL_CONN,
request.app.config.CONSENT_VAL_CONN, request.app.config.TIMEOUT,
[batch], investigator_pkey)
try:
await security_messaging.check_batch_status(
request.app.config.INVESTIGATOR_VAL_CONN, [batch_id])
except (ApiBadRequest, ApiInternalError) as err:
# await auth_query.remove_auth_entry(
# request.app.config.DB_CONN, request.json.get('email'))
raise err
return response.json(body={'status': general.DONE},
headers=general.get_response_headers())
async def get_all_data_from_investigators(request):
"""Fetches complete details of all Accounts in state"""
client_key = general.get_request_key_header(request)
data_list = await security_messaging.get_data_from_investigators(
request.app.config.INVESTIGATOR_VAL_CONN,
request.app.config.CONSENT_VAL_CONN, client_key)
data_list_json = []
for address, data in data_list.items():
data_list_json.append({
'id': data.id,
'height': data.height,
'weight': data.weight,
'A1C': data.A1C,
'FPG': data.FPG,
'OGTT': data.OGTT,
'RPGT': data.RPGT,
'event_time': data.event_time,
'eligible': data.eligible
})
return response.json(body={'data': data_list_json},
headers=general.get_response_headers())