def main():
p = Pool(8)
args = parse_arguments()
sdf_dir = os.path.join(args.sdf_dir)
list_of_sdf_files = [filename for filename in read_sdf_file(sdf_dir)]
print(list_of_sdf_files)
proc = Conformer_generator(args)
t = TicToc()
t.tic()
for file in list_of_sdf_files:
sdf_file_name = file.split('_')[0]
print(sdf_file_name)
full_directory_path = os.path.join(args.conformers_file_dir,
'{}'.format(sdf_file_name))
os.makedirs(full_directory_path)
os.chdir(full_directory_path)
try:
molecule_object_from_sdf_file = MoleculeReader(
os.path.join(sdf_dir, file))
list_of_molecules = [m for m in molecule_object_from_sdf_file]
p.map(proc.generate_conformer, list_of_molecules)
except:
print("can not read sdf file {}".format(file))
t.toc()
print(t.elapsed)
def update(self):
#Update Stuff
if not self.plan:
x0 = drone_pos.pose.position.x
y0 = drone_pos.pose.position.y
_, _, yaw0 = euler_from_quaternion(
(drone_pos.pose.orientation.x, drone_pos.pose.orientation.y,
drone_pos.pose.orientation.z, drone_pos.pose.orientation.w))
t = TicToc()
t.tic()
path = self.proxy(x0, y0, yaw0, self.route[0]).plannedPath
t.toc()
print(t.elapsed)
if len(path.poses) > 0:
rospy.loginfo("pp success")
self.first_pose = False
self.plan = True
print('We have sent the position!')
return pt.common.Status.SUCCESS
# if hitta == False:
else:
rospy.loginfo("pp failure")
return pt.common.Status.FAILURE
else:
#rospy.loginfo("pp running")
return pt.common.Status.SUCCESS
def start(self):
"""
start the job
the job includes the following things:
* fetch new unverified revisions
* score this revisions
* filter all suspected bad revisions
* insert revisions to table
"""
t = TicToc()
t.tic()
sql_user_name = read_sql_user_name()
wikishield_conn = WS(sql_user_name)
wikishield_conn.start()
lm = LangsManager()
for lang_name in lm.langs_names:
lang = lm.get_lang(lang_name)
clf = WikiClassifier(lang, wikishield_conn.ctx)
clf.learn(limit=None)
file_path = WikiClassifier.PICKLE_FOLDER_PATH + '/' + lang_name + '.pickle'
clf.pickle_to_file(file_path)
wikishield_conn.close()
t.toc()
print("learn job summary: elapsed time = ", t.elapsed,
"seconds") #TODO: remove this
def main():
p = multiprocessing.Pool(8)
args = parse_arguments()
sdf_dir = os.path.join(args.sdf_dir)
list_of_sdf_files = [filename for filename in read_sdf_file(sdf_dir)]
#print((list_of_sdf_files))
t = TicToc()
if list_of_sdf_files:
p.map(test_func, list_of_sdf_files)
t.tic()
#molecule_object_from_sdf_file = MoleculeReader(os.path.join(sdf_dir, file))
#list_of_molecules = [m for m in molecule_object_from_sdf_file]
# for mol in molecule_object_from_sdf_file:
# conformers = generate_confs(mol, int(args.number_of_conformers), 8)
#
# with MoleculeWriter('%s_conformers.mol2' % mol.identifier) as mol_writer:
# for c in conformers:
# mol_writer.write(c.molecule)
t.toc()
print(t.elapsed)
def opt_sat(sat_files, hh_sat, num_run):
# uf_li=list(pathlib.Path(dir_name).glob("**/*.cnf"))
p, pattern=os.path.split(sat_files)
uf_li=[os.path.join(p, x) for x in os.listdir(p) if re.fullmatch(pattern, x)]
num_instance=len(uf_li)
uf_mutation=[[0]*num_run for _ in range(num_instance)]
uf_mutation_to_max_goal=[[0]*num_run for _ in range(num_instance)]
uf_goal=[[0]*num_run for _ in range(num_instance)]
uf_runtime=[[0]*num_run for _ in range(num_instance)]
uf_num=[[0]*num_instance for _ in range(2)]
uf_global_ind=[list() for _ in range(2)]
uf_mutation_li=[[list() for _ in range(num_instance)] for _ in range(2)]
uf_goal_li=[[list() for _ in range(num_instance)] for _ in range(2)]
uf_runtime_li=[[list() for _ in range(num_instance)] for _ in range(2)]
t=TicToc()
for instance_id in range(num_instance):
logging.info("======NEXT INSTANCE:{}======".format(instance_id))
sat=Sat(str(uf_li[instance_id]))
sat.print_inner_var()
for run_id in range(num_run):
logging.info("------NEXT RUN:{}------".format(run_id))
t.tic()
sat.reset_solution()
hh_sat.reset_benchmark(sat)
hh_sat.optimize()
hh_sat.stat()
t.toc()
uf_mutation[instance_id][run_id]=hh_sat.num_mutate
uf_mutation_to_max_goal[instance_id][run_id]=hh_sat.num_mutate_to_max_goal
uf_goal[instance_id][run_id]=hh_sat.max_goal
uf_runtime[instance_id][run_id]=t.elapsed
# find global optima within max_mutate
if hh_sat.max_goal==sat.num_cla:
uf_num[0][instance_id]+=1
uf_global_ind[0].append((instance_id, run_id))
uf_mutation_li[0][instance_id].append(hh_sat.num_mutate)
uf_goal_li[0][instance_id].append(hh_sat.max_goal)
uf_runtime_li[0][instance_id].append(t.elapsed)
# didn't find global optima within max_mutate
else:
uf_num[1][instance_id]+=1
uf_global_ind[1].append((instance_id, run_id))
uf_mutation_li[1][instance_id].append(hh_sat.num_mutate)
uf_goal_li[1][instance_id].append(hh_sat.max_goal)
uf_runtime_li[1][instance_id].append(t.elapsed)
return uf_li, (uf_mutation, uf_goal, uf_runtime, uf_mutation_to_max_goal), (uf_num, uf_global_ind, uf_mutation_li, uf_goal_li, uf_runtime_li)
def task1(file_path):
data = pd.read_csv(
file_path,
usecols=(
0, # age
1, # job
15, # p outcome
4, # balance
5, # default
18, # y - classifier
7, # loan - classifier
))
timer = TicToc()
# Data clean-up
data = data_transform(data)
print_table(data.head())
X_data = (data.drop("y", 1))
Y_data = (data["y"])
A_data = (data.drop("loan", 1))
B_data = (data["loan"])
# Training/testing sets
X_train = X_data[:-250]
X_test = X_data[-250:]
Y_train = Y_data[:-250]
Y_test = Y_data[-250:]
A_train = A_data[:-250]
A_test = A_data[-250:]
B_train = B_data[:-250]
B_test = B_data[-250:]
# Apply linear regression model
# regr = linear_model.LinearRegression()
timer.tic()
regr = svm.SVC(gamma=0.5, C=100)
regr.fit(X_train, Y_train)
prediction_x = regr.predict(X_test)
timer.toc()
print(
f"Y-classified: {evaluate_result(prediction_x, Y_test.values)}% matched in {timer.elapsed}s"
)
timer.tic()
svc = svm.SVC(gamma=0.5, C=100)
svc.fit(A_train, B_train)
prediction_a = svc.predict(A_test)
timer.toc()
print(
f"Loan-classified: {evaluate_result(prediction_a, B_test.values)}% matched in {timer.elapsed}s"
)
plt.show()
def task6(file_path):
data = pd.read_csv(
file_path,
usecols=(
0, # age
1, # job
2, # martial
3, # education
7, # loan
18, # y - classifier
))
labels = data.columns.values
timer = TicToc()
# Data clean-up
data = data_transform(data)
print_table(data.head())
X_data = (data.drop("y", 1))
Y_data = (data["y"])
# Training/testing sets
X_train = X_data[:-10000]
X_test = X_data[-10000:]
Y_train = Y_data[:-10000]
Y_test = Y_data[-10000:]
A_train = X_data[:-10]
A_test = X_data[-10:]
B_train = Y_data[:-10]
B_test = Y_data[-10:]
dec_tree = DecisionTreeClassifier()
dec_tree_underfit = DecisionTreeClassifier()
timer.tic()
dec_tree.fit(X_train, Y_train)
prediction_dec = dec_tree.predict(X_test)
timer.toc()
print(
f"DecisionTreeClassifier: {evaluate_result(prediction_dec, Y_test.values)}% matched in {timer.elapsed}s"
)
timer.tic()
dec_tree_underfit.fit(A_train, B_train)
prediction_underfit = dec_tree.predict(A_test)
timer.toc()
print(
f"DecisionTreeClassifier-Underfit: {evaluate_result(prediction_underfit, B_test.values)}% matched in {timer.elapsed}s"
)
def task2(file_path):
data = pd.read_csv(
file_path,
usecols=(
0, # age
2, # martial
))
labels = data.columns.values
colors = ["r.", "g.", "b."]
timer = TicToc()
# Data clean-up
data = data_transform(data)
print_table(data.head())
classifier = KMeans(n_clusters=3)
classifier.fit(data)
center = classifier.cluster_centers_
kmeans_labels = classifier.labels_
timer.tic()
print(f"INFO: Rendering {len(data)} data points - ")
print("INFO: This may take a while...")
for index in range(len(data)):
if (0 < index and index % 1000 == 0):
print(f"INFO: Completed {index} iterations")
plt.plot(
data[labels[0]][index],
data[labels[1]][index],
colors[kmeans_labels[index]],
markersize=10,
)
timer.toc()
print(
f"Render time for all data points: {timer.elapsed}s ({seconds_to_minutes(timer.elapsed)}min)"
)
plt.scatter(
center[:, 0],
center[:, 1],
marker="o",
s=150,
)
plt.show()
def test_maze(self):
size = 20
random.seed(1)
m = make_maze(size, size)
w = len(m.split('\n')[0])
h = len(m.split('\n'))
start = (1, 1) # we choose to start at the upper left corner
goal = (w - 2, h - 2) # we want to reach the lower right corner
t = TicToc()
t.tic()
_path = list(MazeSolver(m).astar(start, goal))
t.toc()
# print("Github", t.elapsed)
t.tic()
path, length = astar(MazeProblem(m, start, goal))
t.toc()
def task7(file_path):
data = pd.read_csv(
file_path,
usecols=(
5, # balance
7, # loan
16, # bank_arg1
18, # y - classifier
))
labels = data.columns.values
timer = TicToc()
# Data clean-up
data = data_transform(data)
print_table(data.head())
X_data = (data.drop("y", 1))
Y_data = (data["y"])
X_train = X_data[:-1]
X_test = X_data[-1:]
Y_train = Y_data[:-1]
Y_test = Y_data[-1:]
dec_tree = DecisionTreeClassifier()
random_forest = RandomForestClassifier()
timer.tic()
dec_tree.fit(X_train, Y_train)
prediction_dec = dec_tree.predict(X_test)
timer.toc()
print(
f"DecisionTreeClassifier: {evaluate_result(prediction_dec, Y_test.values)}% matched in {timer.elapsed}s"
)
timer.tic()
random_forest.fit(X_train, Y_train)
prediction_for = random_forest.predict(X_test)
timer.toc()
print(
f"RandomForestClassifier: {evaluate_result(prediction_for, Y_test.values)}% matched in {timer.elapsed}s"
)
def _run_exec(sandbox_directory, output, problem):
t = TicToc()
status = Status.NOT_RUN
time_limit, mem_limit, _, _, _ = _read_config_file(problem)
script_location = sandbox_directory + 'exec_script.sh'
exec_location = sandbox_directory + output.split('/')[-1]
print('script = {}\nexec = {}'.format(script_location, exec_location))
t.tic()
process = Popen([script_location, exec_location], stdout=PIPE, stderr=PIPE)
stdout, stderr = process.communicate()
elapsed = t.toc()
if os.path.exists('./{}.out'.format(problem)):
shutil.copy('./{}.out'.format(problem), sandbox_directory)
else:
status = Status.WRONG_ANSWER
return_code = int(re.findall(r'\d+', stdout.decode('utf-8'))[0])
print('return_code = {}'.format(return_code))
if return_code == int(Status.SIGINT):
status = Status.TLE
elif return_code == int(Status.SIGSEGV):
status = Status.SIGSEGV
print("SEG FAULT")
elif return_code == int(Status.SIGFPE):
status = Status.SIGFPE
elif return_code == int(Status.SIGABRT):
status = Status.SIGABRT
if status == Status.NOT_RUN and elapsed > time_limit:
status = Status.TLE
# Test for MLE
if status == Status.NOT_RUN and return_code == 0:
status = Status.OK
return status, round(elapsed, 3), stdout
def start(self):
"""
start the job
the job includes the following things:
* fetch new unverified revisions
* score this revisions
* filter all suspected bad revisions
* insert revisions to table
"""
t = TicToc()
t.tic()
local_conn, wiki_conn = conn_mng.open_connections(self.lang)
wiki_classifier = reload_classifier(self.lang.name)
wikimedia_db, wikishield_db, wikimedia_api = conn_mng.init_sources(wiki_conn.ctx, local_conn.ctx, self.lang)
max_rev_id = None
revs, _ = wikimedia_db.fetch_natural_revs(self.lang, self._NUM_REVS, max_rev_id,
self._EX_PART_SIZE, self._MIN_PART_SIZE)
for rev in revs:
diff_text, page_title = wikimedia_api.fetch_rev_diff(rev['wiki_id'], rev['parent_id'])
rev['page_title'] = page_title
print(rev)
words_content = extract_added_words(self.lang, diff_text)
if len(words_content) > 0:
score = wiki_classifier.score_rev(words_content)
rev['score'] = bad_score = score[0]
if bad_score >= self._MIN_BAD_SCORE:
wikishield_db.insert_rev(rev, diff_text, words_content)
wikishield_db.commit()
conn_mng.close_connections(local_conn, wiki_conn)
t.toc()
print("add_revs_job: elapsed time = ", t.elapsed, "seconds") #TODO: remove this
def BlobRemoveThread(
blobRemoveQueue: queue.SimpleQueue,
credentials: str,
bucketName: str,
isTrialRun: bool,
logLevel: str,
threadId: int
) -> None:
# Set logging level and get logger
setLogingLevel(logLevel)
logger = logging.getLogger(__name__)
# Get GCS bucket
credentials = Credentials.from_service_account_info(json.loads(credentials))
client = storage.Client(project=credentials.project_id, credentials=credentials)
bucket = client.get_bucket(bucketName)
# Create stats variables
ticToc = TicToc()
while True:
# Get task
task = blobRemoveQueue.get()
if task is None:
break
# Extract task
name: str = task[0]
ticToc.tic()
if not isTrialRun:
try:
bucket.delete_blob(name)
except:
pass
logger.info('× {}, elapsed: {:.3f}s, thread: {}'.format(
name,
ticToc.toc(),
threadId
))
def main():
"""Used to test the Archipelago class.
Tests 3 random seeds between 0 and 65535 with weathering values of 1, 3, 5 and sea_level values between -20 and 32
in steps of 4.
"""
t = TicToc()
t.tic()
args = []
for seed in random.sample(range(0, int("0xFFFF", 16)), 3):
for weathering in [1, 3, 5]:
for sea_level in range(-20, 32, 4):
sea_level = sea_level / 100 # range() can't be used to generate a list of floats
args.append([seed, weathering, sea_level])
pool = Pool(multiprocessing.cpu_count())
print("Total archipelagos being generated:", len(args))
pool.starmap(test, args)
pool.close()
pool.join()
t.toc()
print("Total time elapsed (seconds): {0:.2f}".format(t.elapsed))
def train_model(classifier,
feature_vector_train,
label,
feature_vector_valid,
is_neural_net=False):
t = TicToc() ## TicToc("name")
t.tic()
# fit the training dataset on the classifier
classifier.fit(feature_vector_train, label)
# predict the labels on validation dataset
predictions = classifier.predict(feature_vector_valid)
if is_neural_net:
predictions = predictions.argmax(axis=-1)
t.toc()
print("Time elapsed to train: {}".format(t.elapsed))
# return metrics.f1_score(predictions, valid_y) * 100
tn, fp, fn, tp = metrics.confusion_matrix(predictions, valid_y).ravel()
print("Confusion matrix results:")
print("True neg: {}\nFalse pos: {}\nFalse neg: {}\nTrue pos:{}".format(
tn, fp, fn, tp))
print()
return metrics.f1_score(predictions, valid_y) * 100
def task3(file_path):
binning3 = preprocessing.KBinsDiscretizer(n_bins=3)
binning6 = preprocessing.KBinsDiscretizer(n_bins=6)
binning9 = preprocessing.KBinsDiscretizer(n_bins=9)
data = pd.read_csv(
file_path,
usecols=(
7, # loan - classifier
16, # bank_arg1
18, # y - classifier
))
labels = data.columns.values
timer = TicToc()
# Data clean-up
data = data_transform(data)
print_table(data.head())
X_data = (data.drop("bank_arg1", 1))
Y_data = (data["bank_arg1"])
# Training/testing sets
X_train = X_data[:-2500]
X_test = X_data[-2500:]
Y_train = Y_data[:-2500]
Y_test = Y_data[-2500:]
timer.tic()
binning3.fit(X_data)
prediction3 = binning3.transform(X_data)
timer.toc()
timer.tic()
binning6.fit(X_data)
prediction6 = binning6.transform(X_data)
timer.toc()
timer.tic()
binning9.fit(X_data)
prediction9 = binning9.transform(X_data)
timer.toc()
# TODO: Fix evaluation for matrix
acc3 = evaluate_result(prediction3, Y_data.values)
acc6 = evaluate_result(prediction6, Y_data.values)
acc9 = evaluate_result(prediction9, Y_data.values)
print(f"Binning with 3 units: {acc3}% matched in {timer.elapsed}s")
print(f"Binning with 6 units: {acc6}% matched in {timer.elapsed}s")
print(f"Binning with 9 units: {acc9}% matched in {timer.elapsed}s")
def listCommand(databaseFileName: str, prefix: str, logLevel: str, sortBy: str,
reverseSort: bool, machineReadable: bool) -> None:
def getKey(fileInfo: FileInfo):
if sortBy == 'perm':
return fileInfo.stats['mode']
if sortBy == 'blobs':
return len(fileInfo.blobIds)
if sortBy == 'uid':
return fileInfo.stats['uid']
if sortBy == 'gid':
return fileInfo.stats['gid']
if sortBy == 'decrypt':
return fileInfo.decryptedSize
if sortBy == 'encrypt':
return fileInfo.encryptedSize
if sortBy == 'modification':
return fileInfo.stats['mtime']
if sortBy == 'path':
return fileInfo.path
return 0
# Set process title
setproctitle.setproctitle('ListCommand')
# Set logging level and get logger
setLogingLevel(logLevel)
logger = logging.getLogger(__name__)
# Print parameters
logger.info(
'database: {}, prefix: {}, sortBy: {}, reverseSort: {}, machineReadable: {}'
.format(databaseFileName, prefix, sortBy, reverseSort,
machineReadable))
# Create stats variables
ticToc = TicToc()
ticToc.tic()
# Get transient database
database = Database.getTransientCopy(databaseFileName)
# Get absolute path
prefix = os.path.abspath(prefix)
# Get file infos
fileInfos = [
database.getFile(path) for path in database.selectPaths(prefix)
]
# Close database
database.close()
# Sort files based on key
fileInfos.sort(key=getKey, reverse=reverseSort)
# Print in different format for machines
if machineReadable:
for fileInfo in fileInfos:
print('{}\t{}\t{}\t{}\t{}\t{}\t{}\t{}\t{}'.format(
fileInfo.stats['mode'], len(fileInfo.blobIds),
fileInfo.stats['uid'], fileInfo.stats['gid'],
fileInfo.decryptedSize, fileInfo.encryptedSize,
fileInfo.stats['atime'], fileInfo.stats['mtime'],
fileInfo.path))
else:
# Print a header for humans
print('{:8} {:5} {:5} {:5} {:10} {:10} {:26} {}'.format(
'Perm', 'Blobs', 'uid', 'gid', 'Decrypt', 'Encrypt',
'Modification', 'Path'))
for fileInfo in fileInfos:
print('{:8} {:<5} {:<5} {:<5} {:>10} {:>10} {:26} {}'.format(
oct(fileInfo.stats['mode']), len(fileInfo.blobIds),
fileInfo.stats['uid'], fileInfo.stats['gid'],
naturalsize(fileInfo.decryptedSize),
naturalsize(fileInfo.encryptedSize),
datetime.fromtimestamp(fileInfo.stats['mtime']).strftime('%c'),
fileInfo.path))
# Print elapsed time
logger.info('elapsed: {:.3f}s'.format(ticToc.toc()))
def generate_preprocessed_file():
savingPath = get_preprocessed_file_path()
if Path(savingPath).is_file() == False:
timer = TicToc('preprocessing time')
timer.tic()
print('Generating preprocessed dataset file started ..........')
ds_path = "../dataset/Mobile_App_Success_Milestone_2.csv" # Training
if ds_path.__contains__('xlsx'):
dataset = pd.read_excel(ds_path, parse_dates=['Last Updated'])
else:
dataset = pd.read_csv(ds_path,
parse_dates=['Last Updated'],
low_memory=False)
dataset.dropna(how='any', inplace=True)
dataset['App_Rating'] = dataset['App_Rating'].str.replace(
'Low_Rating', '1')
dataset['App_Rating'] = dataset['App_Rating'].str.replace(
'Intermediate_Rating', '2')
dataset['App_Rating'] = dataset['App_Rating'].str.replace(
'High_Rating', '3')
dataset['App_Rating'] = pd.to_numeric(dataset['App_Rating'],
downcast='integer',
errors='coerce')
dataset['Last Updated'] = pd.to_datetime(dataset['Last Updated'],
errors='coerce')
most_freq_date = dataset['Last Updated'].value_counts().idxmax()
dataset['Last Updated'] = dataset['Last Updated'].fillna(
most_freq_date)
dataset['Price'] = dataset['Price'].str.replace('$', '')
dataset['Installs'] = dataset['Installs'].str.replace('+', '')
dataset['Installs'] = dataset['Installs'].str.replace(',', '')
dataset['Reviews'] = pd.to_numeric(dataset['Reviews'],
downcast='integer',
errors='coerce')
dataset['Price'] = pd.to_numeric(dataset['Price'],
downcast='float',
errors='coerce')
dataset['Installs'] = pd.to_numeric(dataset['Installs'],
downcast='integer',
errors='coerce')
dataset.fillna(0)
dataset["Size"] = dataset["Size"].str.replace(
"Varies with device",
str(len(dataset[dataset['Size'] == "Varies with device"])))
dataset["Size"] = dataset["Size"].str.replace(",", "")
dataset["Size"] = dataset["Size"].str.replace("+", "")
dataset["Size"] = (dataset["Size"].replace(r'[kM]+$', '', regex=True).astype(float) *\
dataset["Size"].str.extract(r'[\d\.]+([kM]+)', expand=False).fillna(1).replace(['k','M'], [10**3, 10**6]).astype(int))
dataset.fillna(0)
contentRatings = dataset['Content Rating'].unique()
for Uval in contentRatings:
meanVal = len(dataset[dataset['Content Rating'] == Uval])
dataset['Content Rating'] = dataset['Content Rating'].str.replace(
Uval, str(meanVal))
Categories = dataset['Category'].unique()
for Uval in Categories:
repeatingTimes = len(dataset[dataset['Category'] == Uval])
dataset['Category'] = dataset['Category'].str.replace(
Uval, str(repeatingTimes))
# for i in range(len(dataset)) :
# dataset.iloc[ i , 7] = datetime.timestamp(dataset.iloc[ i , 7]) # Last Update
dataset['Content Rating'] = pd.to_numeric(dataset['Content Rating'],
downcast='float',
errors='coerce')
dataset['Category'] = pd.to_numeric(dataset['Category'],
downcast='integer',
errors='coerce')
cols = ('App Name', 'Last Updated', 'Minimum Version',
'Latest Version')
dataset = Feature_Encoder(dataset, cols)
cols = dataset.columns
for c in cols:
dataset[c] = dataset[c].fillna(dataset[c].value_counts().idxmax())
dataset.to_csv(path_or_buf=savingPath, index=False)
print('Preprocessed File Generated Successfully.......')
timer.toc()
print('Preprocessing Time : ' + str(round(timer.elapsed / 60, 5)) +
' Minutes')
return savingPath
else:
return get_preprocessed_file_path()
def ChunkEncryptionProcess(chunkEncryptionQueue: multiprocessing.SimpleQueue,
blobInfoQueue: multiprocessing.SimpleQueue,
credentials: str, bucketName: str, processId: int,
nUploadThreads: int, uploadQueueMiB: int) -> None:
def readChunk(path: str,
offset: int,
length: int = 1024 * 1024 * 32) -> bytes:
fp = open(path, 'rb')
assert offset == fp.seek(offset)
chunk = fp.read(length)
fp.close()
return chunk
def encryptChunk(chunk: bytes) -> list:
# Choose a random name
name = ''.join(random.choice('0123456789abcdef') for i in range(32))
# Get decrypted stats
decryptedSize = len(chunk)
decryptedSha256 = hashlib.sha256(chunk).digest()
# Generate key and encrypt chunk
# Discard decrypted chunk at the same time
encryptionKey = Fernet.generate_key()
chunk = Fernet(encryptionKey).encrypt(chunk)
# Get encrypted stats
encryptedSize = len(chunk)
encryptedSha256 = hashlib.sha256(chunk).digest()
# Generate blob info
blobInfo = BlobInfo(name, encryptionKey, encryptedSize,
encryptedSha256, decryptedSize, decryptedSha256)
return [chunk, blobInfo]
# Start blob upload threads
blobUploadQueueBytes = ThreadValueLock(1024 * 1024 * uploadQueueMiB)
blobUploadQueue = queue.SimpleQueue()
blobUploadThreads = []
for threadId in range(nUploadThreads):
thread = Thread(target=BlobUploadThread,
args=[
blobUploadQueue, blobUploadQueueBytes, credentials,
bucketName, threadId
],
name='BlobUploadThread{}'.format(threadId))
thread.start()
blobUploadThreads.append(thread)
# Create stats variable
ticToc = TicToc()
# Process tasks until received None
while True:
# Set process title
setproctitle.setproctitle('ChunkEncryptionProcess{}'.format(processId))
# Get task
task = chunkEncryptionQueue.get()
if task is None:
break
# Start measuring time used for encryption
elapsed = []
ticToc.tic()
# Extract task
path: str = task[0]
offset: int = task[1]
fileSize: int = task[2]
# Update process title
setproctitle.setproctitle(
'ChunkEncryptionProcess{} {}, chunk {}/{}'.format(
processId, path, offset // (1024 * 1024 * 32),
math.ceil(fileSize / (1024 * 1024 * 32))))
# Read chunk
chunk = readChunk(path, offset)
# Encrypt chunk
# Discard decrypted chunk at the same time
result: list = encryptChunk(chunk)
chunk: bytes = result[0]
blobInfo: BlobInfo = result[1]
# Stop measuring time used for encryption
elapsed.append(ticToc.toc())
# Start measuring time used waiting for upload queue
ticToc.tic()
# Send encrypted chunk to blob upload threads
blobUploadQueueBytes.acquire(len(chunk))
blobUploadQueue.put([blobInfo.name, chunk])
# Stop measuring time used waiting for upload queue
elapsed.append(ticToc.toc())
# Send blob info to blob info collection process
blobInfoQueue.put([
path, offset, blobInfo, elapsed,
blobUploadQueue.qsize(),
blobUploadQueueBytes.getValue()
])
# Stop blob upload threads
for _ in range(nUploadThreads):
blobUploadQueue.put(None)
for thread in blobUploadThreads:
thread.join()
class SVMLR_FrankWolfe(object):
def __init__(self,
nb_labels,
nb_instances,
DEBUG=False,
DEBUG_SOLVER=False,
is_shared_H_memory=False,
SOLVER_LP='cvxopt',
startup_idx_save_disk=None,
process_dot_Hxt=1):
self._logger = create_logger("__SVMLR_FrankWolfe", DEBUG)
self.nb_labels = nb_labels
self.nb_instances = nb_instances
self.nb_preferences = int(self.nb_labels * (self.nb_labels - 1) * 0.5)
self.d_size = self.nb_preferences * self.nb_instances
self._t = TicToc("__SVMLR_FrankWolfe")
self._t.set_print_toc(False)
solvers.options["show_progress"] = DEBUG_SOLVER
self._trace_convergence = []
self.is_shared_H_memory = is_shared_H_memory
self.DEBUG = DEBUG
# variables to create matrix H in parallel and shared memory and disk
self.name_matrix_H = "sparse_H_" + str(int(time.time()))
self.in_temp_path = "/tmp/"
self.startup_idx_save_disk = int(self.nb_preferences * 0.5 + 1) \
if startup_idx_save_disk is None \
else startup_idx_save_disk
self.SOLVER_LP_DEFAULT = SOLVER_LP
self.process_dot_Hxt = process_dot_Hxt
if self.process_dot_Hxt > 0:
self.pool = multiprocessing.Pool(processes=self.process_dot_Hxt)
def get_alpha(self, A, q, v, max_iter=100, tol=1e-8):
# 0. calculate the large matrix des
# it is shared memory, we use the H global variable to speed to multiplication bigger matrix
H = self.calculate_H(q, A)
# self._logger.debug("Is it semi-definite positive matrix (%s)", is_symmetric(H))
# 1. Set the constraints for the dual problem
e_i = self.nb_preferences
max_limit = float(v / e_i)
# 2. Call wrapper linear programing solver
lp_programing = self.__wrapper_lp_solvers(0, max_limit, solver=self.SOLVER_LP_DEFAULT)
# 3. Frank-Wolf algorithm
x_t = np.zeros(self.d_size) # init value for algorithm frank-wolfe
c = np.repeat(-1.0, self.d_size)
g_t, it = 0, 0
for it in range(max_iter):
# Step 0: compute gradient of the sparse matrix
grad_fx = self.compute_H_dot_x_grad(x_t, H, c)
# Step 1: direction-finding sub-problem
s_t = lp_programing(grad_fx)
d_t = s_t - x_t
g_t = -1 * (grad_fx.dot(d_t))
# verify if gap is below tolerance
if g_t <= tol:
break
# Step 2: set step size by line search
Hd_t = self.compute_H_dot_x_grad(d_t, H)
z_t = d_t.dot(Hd_t)
step_size = min(-1 * (c.dot(d_t) + x_t.dot(Hd_t)) / z_t, 1.)
# Step 3: update current value
x_t = x_t + step_size * d_t
if self.DEBUG:
self._trace_convergence.append(g_t)
self._logger.debug("Gradient-cost-iteration (it, grad) (%s, %s)", it, g_t)
self._logger.debug("Cost-Fx-gradient and #iters (grad_fx, iters, is_optimal) (%s, %s, %s)",
g_t, it, it + 1 < max_iter)
self._logger.debug("Vector solution alphas (%s)", x_t)
return x_t
# async def dot_xt_Hr_preference(self, x_t, H):
# async def one_iteration(r):
# return H[r] @ x_t + H[r].T @ x_t
#
# coros_or_futures = [one_iteration(r) for r in range(0, self.startup_idx_save_disk - 1)]
# res = await asyncio.gather(*coros_or_futures)
# return np.sum(res, axis=0)
def compute_H_dot_x_grad(self, x_t, H, add_vec=None):
# Gradient evaluate in current value x_t
grad_fx = np.zeros(self.d_size)
if self.is_shared_H_memory: # multiprocessing inner product space
def dot_xt_Hr_preference(H, x_t, r):
self._logger.debug("Dot-inner-product preference (H_%s @ x_t)", r)
return H @ x_t + H.T @ x_t
__thread_dot = [None] * (self.startup_idx_save_disk - 1)
for i in range(self.startup_idx_save_disk - 1):
__thread_dot[i] = ThreadWithReturnValue(target=dot_xt_Hr_preference, args=(H[i], x_t, i,))
__thread_dot[i].start()
if self.process_dot_Hxt > 1:
# (1) asynchronous at testing
# import asyncio
# loop = asyncio.new_event_loop()
# inner_product = loop.run_until_complete(self.dot_xt_Hr_preference(x_t, H))
# grad_fx = grad_fx + inner_product
# loop.close()
# (2) multiprocessing dot calculation
# It's not possible because it does not share memory very well (until python-3.8)
# fnc_target = partial(dot_xt_Hr_preference, x_t)
# res = self.pool.map(fnc_target, range(0, self.startup_idx_save_disk - 1))
# for x_memory in res:
# grad_fx = grad_fx + x_memory
func_target = partial(dot_xt_Hr_from_disk_hard, x_t, self.name_matrix_H, self.in_temp_path)
res = self.pool.map(func_target, range(self.startup_idx_save_disk - 1, self.nb_preferences))
for x_r in res:
grad_fx = grad_fx + x_r
else: # singleton processing
# for r in range(0, self.startup_idx_save_disk - 1):
# grad_fx = grad_fx + H[r] @ x_t + H[r].T @ x_t
for r in range(self.startup_idx_save_disk - 1, self.nb_preferences):
H_disk = load_npz(self.in_temp_path + self.name_matrix_H + "_" + str(r + 1) + ".npz")
x_disk = H_disk @ x_t + H_disk.T @ x_t
grad_fx = grad_fx + x_disk
for _dot in __thread_dot:
grad_fx = grad_fx + _dot.join()
else:
grad_fx = H @ x_t + H.T @ x_t
if add_vec is not None:
grad_fx = grad_fx + add_vec
return grad_fx
def calculate_H(self, q, A):
if self.is_shared_H_memory:
return sparse_matrix_H_shared_memory_and_disk(q, A,
self.nb_preferences,
self.nb_instances,
self.name_matrix_H,
self.startup_idx_save_disk,
self.in_temp_path)
else:
return self.all_sparse_symmetric_H(q, A)
def all_sparse_symmetric_H(self, q, A):
self._logger.debug('Size H-matrix (nb_preference, nb_instances, d_size) (%s, %s, %s)',
self.nb_preferences, self.nb_instances, self.nb_preferences * self.nb_instances)
data_coo = None
for r in range(0, self.nb_preferences):
rows, cols, data = array.array('i'), array.array('i'), array.array('d')
def append(i, j, d):
rows.append(i)
cols.append(j)
data.append(d)
for l in range(r, self.nb_preferences):
self._t.tic()
for i in range(0, self.nb_instances):
_i = i if r == l else 0
for j in range(_i, self.nb_instances):
list_pq = q[i][r]
list_ab = q[j][l]
# creation index (row, column)
i_row = self.nb_instances * r + i
i_col = self.nb_instances * l + j
cell_data = A[i, j]
# put half value to diagonal matrix to use H + H.T
if i_row == i_col and r == l:
cell_data = 0.5 * cell_data
if list_pq[0] == list_ab[0]:
append(i_row, i_col, cell_data)
elif list_pq[0] == list_ab[1]:
append(i_row, i_col, -1 * cell_data)
elif list_pq[1] == list_ab[0]:
append(i_row, i_col, -1 * cell_data)
elif list_pq[1] == list_ab[1]:
append(i_row, i_col, cell_data)
self._logger.debug('Time pair-wise preference label (%s, %s, %s)',
'P' + str(r + 1), 'P' + str(l + 1), self._t.toc())
if data_coo is not None:
data.extend(data_coo.data)
rows.extend(data_coo.row)
cols.extend(data_coo.col)
rows = np.frombuffer(rows, dtype=np.int32)
cols = np.frombuffer(cols, dtype=np.int32)
data = np.frombuffer(data, dtype='d')
data_coo = coo_matrix((data, (rows, cols)), shape=(self.d_size, self.d_size))
return data_coo.tocsr()
def __wrapper_lp_solvers(self, lower_bound, upper_bound, solver='cvxopt'):
self._logger.debug("Linear solver selected (%s)", solver)
if solver == 'cvxopt':
def __executing(grad_fx):
res = solvers.lp(matrix(grad_fx, (self.d_size, 1)), G=G, h=h)
if res['status'] != 'optimal':
self._logger.info("[Solution-not-Optimal-Not-convergence] v_default (%s)", v)
return np.array([v for v in res["x"]])
# 1. Create bound constraint for linear programming
x_bound_upper = spmatrix(1.0, range(self.d_size), range(self.d_size))
x_bound_lower = spmatrix(-1.0, range(self.d_size), range(self.d_size))
G = sparse([x_bound_upper, x_bound_lower])
h = matrix(np.hstack([np.repeat(upper_bound, self.d_size), -np.zeros(self.d_size)]))
return __executing
elif solver == 'scipy':
def __executing(grad_fx):
res = linprog(grad_fx, bounds=(lower_bound, upper_bound))
if res['status'] != 0:
self._logger.info("[Solution-not-Optimal-Not-convergence] v_default (%s)", v)
return np.array([v for v in res["x"]])
return __executing
elif solver == 'salmuz':
def __lp_with_box_constraint(c):
lp_solution_optimal = np.zeros(c.shape)
idx_negative_value = np.where(c < 0)[0]
if len(idx_negative_value) == 0:
return lp_solution_optimal
lp_solution_optimal[idx_negative_value] = upper_bound
return lp_solution_optimal
return __lp_with_box_constraint
else:
raise Exception('Solver has not implemented yet')
def plot_convergence(self):
plt.plot(self._trace_convergence, lw=1)
plt.yscale('log')
plt.xlabel('Number of iterations')
plt.ylabel('Relative Frank-Wolf gap')
plt.title('Convergence QP')
plt.grid()
plt.show()
def __del__(self):
# remove temporal files where it save the sparse matrix
if self.is_shared_H_memory:
for r in range(self.startup_idx_save_disk - 1, self.nb_preferences):
os.remove(self.in_temp_path + self.name_matrix_H + "_" + str(r + 1) + ".npz")
# release pool process after computations
if self.pool is not None:
self.pool.close()
def task4(file_path):
data = pd.read_csv(
file_path,
usecols=(
0, # age
1, # job
2, # martial
3, # education
7, # loan
18, # y - classifier
))
labels = data.columns.values
timer = TicToc()
# Data clean-up
data = data_transform(data)
print_table(data.head())
X_data = (data.drop("y", 1))
Y_data = (data["y"])
# Training/testing sets
X_train = X_data[:-10000]
X_test = X_data[-10000:]
Y_train = Y_data[:-10000]
Y_test = Y_data[-10000:]
kneighbors = KNeighborsClassifier()
dec_tree = DecisionTreeClassifier()
gauss = GaussianNB()
svc = svm.SVC()
random_forest = RandomForestClassifier()
timer.tic()
kneighbors.fit(X_train, Y_train)
prediction_kn = kneighbors.predict(X_test)
timer.toc()
print(
f"KNeighborsClassifier: {evaluate_result(prediction_kn, Y_test.values)}% matched in {timer.elapsed}s"
)
timer.tic()
dec_tree.fit(X_train, Y_train)
prediction_dec = dec_tree.predict(X_test)
timer.toc()
print(
f"DecisionTreeClassifier: {evaluate_result(prediction_dec, Y_test.values)}% matched in {timer.elapsed}s"
)
timer.tic()
gauss.fit(X_train, Y_train)
prediction_g = gauss.predict(X_test)
timer.toc()
print(
f"GaussianNB: {evaluate_result(prediction_g, Y_test.values)}% matched in {timer.elapsed}s"
)
timer.tic()
svc.fit(X_train, Y_train)
prediction_svc = svc.predict(X_test)
timer.toc()
print(
f"svm.SVC: {evaluate_result(prediction_svc, Y_test.values)}% matched in {timer.elapsed}s"
)
timer.tic()
random_forest.fit(X_train, Y_train)
prediction_for = random_forest.predict(X_test)
timer.toc()
print(
f"RandomForestClassifier: {evaluate_result(prediction_for, Y_test.values)}% matched in {timer.elapsed}s"
)
def BlobInfoCollectionProcess(blobInfoQueue: multiprocessing.SimpleQueue,
databaseFileName: str, logLevel: str,
nEncryptionWorkers: int,
nFileHashingWorkers: int) -> None:
def sendToDatabase(database: Database, logger: logging.Logger, path: str,
record: list, nEncryptionWorkers: int) -> int:
# Sort blob info according to offset
blobInfoPairs: list = record[2]
blobInfoPairs.sort(key=lambda blobInfoPair: blobInfoPair[0])
blobInfos = [blobInfoPair[1] for blobInfoPair in blobInfoPairs]
# Create stats variables
decryptedSize = 0
encryptedSize = 0
# Insert blob info into database
blobIds = []
for blobInfo in blobInfos:
blobId = database.setBlob(blobInfo)
blobIds.append(blobId)
decryptedSize += blobInfo.decryptedSize
encryptedSize += blobInfo.encryptedSize
assert decryptedSize == record[0]
# Wait and get hash of file
filehashingResult: multiprocessing.pool.AsyncResult = record[4]
filehashingResult.wait()
sha256 = filehashingResult.get()
# Get stat of file
osStat = os.stat(path)
stats = {
'mode': osStat.st_mode,
'uid': osStat.st_uid,
'gid': osStat.st_gid,
'atime': osStat.st_atime,
'mtime': osStat.st_mtime,
}
# Insert file info into database
fileInfo = FileInfo(path, sha256, stats, encryptedSize, decryptedSize,
blobIds)
database.setFile(fileInfo)
# Print info
elapsed = record[3]
logger.info(
'+ {}, before: {}, after: {}, blobs: {}, elapsed: {:.3f}s, speed: {}/s {}/s'
.format(path, naturalsize(decryptedSize),
naturalsize(encryptedSize), len(blobIds), elapsed,
naturalsize(decryptedSize / elapsed * nEncryptionWorkers),
naturalsize(encryptedSize / elapsed * nEncryptionWorkers)))
return encryptedSize
# Set process title
setproctitle.setproctitle('BlobInfoCollectionProcess')
# Set logging level and get logger
setLogingLevel(logLevel)
logger = logging.getLogger(__name__)
# Open database
database = Database(databaseFileName)
# Create record pool
recordPool = dict()
# Create file hashing pool
fileHashingPool = Pool(processes=nFileHashingWorkers)
# Create stats variables
decryptedSize = 0
encryptedSize = 0
ticToc = TicToc()
# Process tasks until received None
ticToc.tic()
while True:
# Get task
task = blobInfoQueue.get()
if task is None:
break
# Extract task
path: str = task[0]
offset: int = task[1]
blobInfo: BlobInfo = task[2]
elapsed: list = task[3]
uploadQueueSize: int = task[4]
uploadQueueBytes: int = task[5]
# Print info
logger.info(
'+ {}, before: {}, after: {}, elapsed: {:.3f}s {:.3f}s, speed: {}/s {}/s, queue: {} {}'
.format(blobInfo.name, naturalsize(blobInfo.decryptedSize),
naturalsize(blobInfo.encryptedSize),
elapsed[0], elapsed[1],
naturalsize(blobInfo.decryptedSize / elapsed[0]),
naturalsize(blobInfo.encryptedSize / elapsed[0]),
uploadQueueSize, naturalsize(uploadQueueBytes)))
# Get file record from pool
if path in recordPool:
record = recordPool[path]
# Create a new record if there is no record
else:
# Start hashing the file
filehashingResult = fileHashingPool.apply_async(
func=FileHashingPoolFunction, args=[path])
# Create new record
record = [
os.stat(path).st_size, # File size
0, # Total bytes processed
[], # BlobInfo[]
0, # Total elapsed time processing the file
filehashingResult # Async hashing result
]
# Insert new record
recordPool[path] = record
# Update record
record[1] += blobInfo.decryptedSize
record[2].append([offset, blobInfo])
record[3] += elapsed[0] + elapsed[1]
# If file is completely processed, send file record to database
if record[0] == record[1]:
# Update process title
setproctitle.setproctitle(
'BlobInfoCollectionProcess {}'.format(path))
decryptedSize += record[0]
encryptedSize += sendToDatabase(database, logger, path, record,
nEncryptionWorkers)
# Remove file record from pool
recordPool.pop(path)
# Reset process title
setproctitle.setproctitle('BlobInfoCollectionProcess')
# Stop timer
elapsed = ticToc.toc()
# Close file hashing pool
fileHashingPool.close()
fileHashingPool.join()
# Close database
database.commit()
database.close()
# Print info
logger.info('elapsed: {:.3f}s, avg speed: {}/s {}/s'.format(
elapsed, naturalsize(decryptedSize / elapsed),
naturalsize(encryptedSize / elapsed)))
class SVMLR_QP(object):
def __init__(self,
nb_labels,
nb_instances,
DEBUG=False,
DEBUG_SOLVER=False):
self._logger = create_logger("__SVMLR_QP", DEBUG)
self.nb_labels = nb_labels
self.nb_instances = nb_instances
self._t = TicToc("__SVMLR_QP")
self._t.set_print_toc(False)
solvers.options["show_progress"] = DEBUG_SOLVER
@timeit
def get_alpha(self, A, q, v):
"""
:return: list of alpha, size k(k-1)/2
"""
# 1. Calculate matrix H
# h = self.old_calculate_H(q, data)
h_numpy = self.calculate_H(q, A)
# np.set_printoptions(linewidth=125)
# print(np.array(matrix(h_numpy)))
# np.savetxt("mat_qd.txt", np.array(matrix(h_numpy)), fmt='%0.5f')
# 2.Set the constraints for the dual problem
e_i = int(0.5 * self.nb_labels * (self.nb_labels - 1))
max_limit = float(v / e_i)
size_H = int(0.5 * self.nb_labels * (self.nb_labels - 1) *
self.nb_instances)
res = self.min_convex_qp(
h_numpy,
np.repeat(-1.0, size_H),
np.repeat(0.0, size_H),
np.repeat(max_limit, size_H),
size_H,
)
solution = np.array([v for v in res["x"]])
if res['status'] != 'optimal':
self._logger.info(
"[Solution-not-Optimal-Not-convergence] v_default (%s)", v)
return solution
@timeit
def calculate_H(self, q, A):
"""
:param A: numpy array
:param q: list Q
:return: Matrix H
"""
row, col, data = [], [], []
nb_preferences = int(self.nb_labels * (self.nb_labels - 1) * 0.5)
self._logger.debug('Size H-matrix (%s, %s, %s)', nb_preferences,
self.nb_instances,
nb_preferences * self.nb_instances)
for r in range(0, nb_preferences):
for l in range(r, nb_preferences):
self._t.tic()
for j in range(0, self.nb_instances):
_j = j if r == l else 0
for i in range(_j, self.nb_instances):
list_pq = q[i][r]
list_ab = q[j][l]
# creation index (row, column)
i_row = self.nb_instances * r + i
i_col = self.nb_instances * l + j
cell_data = A[i, j]
if list_pq[0] == list_ab[0]:
if i_col == i_row:
row.append(i_row)
col.append(i_col)
data.append(cell_data)
else:
row.extend((i_row, i_col))
col.extend((i_col, i_row))
data.extend((cell_data, cell_data))
elif list_pq[0] == list_ab[1]:
if i_col == i_row:
row.append(i_row)
col.append(i_col)
data.append(-1 * cell_data)
else:
row.extend((i_row, i_col))
col.extend((i_col, i_row))
data.extend((-1 * cell_data, -1 * cell_data))
elif list_pq[1] == list_ab[0]:
if i_col == i_row:
row.append(i_row)
col.append(i_col)
data.append(-1 * cell_data)
else:
row.extend((i_row, i_col))
col.extend((i_col, i_row))
data.extend((-1 * cell_data, -1 * cell_data))
elif list_pq[1] == list_ab[1]:
if i_col == i_row:
row.append(i_row)
col.append(i_col)
data.append(cell_data)
else:
row.extend((i_row, i_col))
col.extend((i_col, i_row))
data.extend((cell_data, cell_data))
self._logger.debug(
'Time pair-wise preference label (%s, %s, %s)',
'P' + str(r + 1), 'P' + str(l + 1), self._t.toc())
size_H = int(nb_preferences * self.nb_instances)
mat_h = spmatrix(data, row, col, size=(size_H, size_H))
# self._logger.debug("Full matrix(mat_a)\n %s", mat_a)
# for verification with old version
# np.savetxt("mat_h.txt", matrix(mat_h), fmt='%0.3f')
return mat_h
def min_convex_qp(self, H, q, lower, upper, d):
ell_lower = matrix(lower, (d, 1))
ell_upper = matrix(upper, (d, 1))
q = matrix(q, (d, 1))
I = matrix(0.0, (d, d))
I[::d + 1] = 1
G = matrix([I, -I])
h = matrix([ell_upper, -ell_lower])
# solvers.options["refinement"] = 2
solvers.options["kktreg"] = 1e-9
# https://groups.google.com/forum/#!msg/cvxopt/Umcrj8UD20g/iGY4z5YgDAAJ
return solvers.qp(P=H,
q=q,
G=G,
h=h,
kktsolver="ldl",
options=solvers.options)
def plot_convergence(self):
raise Exception("Not implemented yet")
class TagFinder():
def __init__(self):
self.in_between_wait = .05
self.driver = self.setup_selenium_driver()
self.taggees = {}
self.successful_retrievals = 0
self.first_url = ""
self.MAX_RUN_TIME = 360
self.timer = TicToc()
def setup_selenium_driver(self):
usr = os.getenv('fbusername')
pwd = os.getenv('fbpassword')
PROJECT_ROOT = os.path.abspath(os.path.dirname(__file__))
DRIVER_BIN = os.path.join(PROJECT_ROOT, "chromedriver")
driver = webdriver.Chrome(executable_path=DRIVER_BIN)
# driver = webdriver.Firefox(
# executable_path='/Users/mattross/webdriver/gecko/v0.26.0/geckodriver-v0.26.0-macos/geckodriver')
# driver = webdriver.Chrome()
driver.get('https://www.facebook.com/')
print("Opened facebook")
sleep(.1)
username_box = driver.find_element_by_id('email')
username_box.send_keys(usr)
print("Email Id entered")
sleep(.21)
password_box = driver.find_element_by_id('pass')
password_box.send_keys(pwd)
print("Password entered")
login_box = driver.find_element_by_id('loginbutton')
login_box.click()
sleep(.1)
return driver
def get_name_of_tagger(self, driver):
while True:
try:
tager = driver.find_element_by_class_name(taggee_class).text
if tager is not None:
try:
tag_date = driver.find_element_by_class_name(
"_39g5").text
if not self.taggees[tager]["last_tagged"]:
self.taggees[tager]["last_tagged"] = tag_date
self.taggees[tager]["first_tagged"] = tag_date
except Exception as e:
# print(e)
print("")
# print("could not get date ")
# Manage Current Speed Of Timer
if self.successful_retrievals < 6:
self.successful_retrievals += 1
else:
# print("Retrieved 6 photos in a row successfully, resetting sleep timer")
self.successful_retrievals = 0
self.in_between_wait = .05
if driver.current_url != self.first_url:
return tager
else:
self.stop_iteration_and_display_data()
except Exception as e:
# print("Could not load page fast enough, trying again {}".format(e))
self.in_between_wait += .1
# print("increasing global wait time to {}".format(self.in_between_wait))
sleep(self.in_between_wait)
driver.find_element_by_css_selector('body').send_keys(
Keys.ARROW_RIGHT)
def find_all_tagged_photos(self):
driver = self.driver
profile_url = "https://www.facebook.com/Ross.Ross.1080/photos"
profile_url = "https://www.facebook.com/steviedunbardude/photos"
profile_url = "https://www.facebook.com/mary.notari"
if "/photos" not in profile_url:
profile_url += "/photos"
driver.get(profile_url)
sleep(.5)
driver.find_element_by_css_selector('body').click()
tags = driver.find_elements_by_class_name('fbPhotoStarGridElement')
sleep(1)
tags[0].click()
sleep(1)
print("starting iteration ")
self.timer.tic()
for i in range(2130):
tager = self.get_name_of_tagger(driver)
if not self.first_url:
self.first_url = driver.current_url
if tager not in self.taggees.keys():
self.taggees[tager] = {
"tag_count": 1,
"first_tagged": "",
"last_tagged": ""
}
print("You have been tagged by {} count is at {}".format(
tager, len(self.taggees.keys())))
else:
self.taggees[tager]["tag_count"] += 1
# print("You have been tagged by {} {} times ".format(tager,taggees[tager]))
driver.find_element_by_css_selector('body').send_keys(
Keys.ARROW_RIGHT)
sleep(self.in_between_wait)
if self.timer.toc() > self.MAX_RUN_TIME:
self.stop_iteration_and_display_data()
self.stop_iteration_and_display_data()
def stop_iteration_and_display_data(self):
print("Process took {}s".format(self.timer.toc()))
self.driver.quit()
print(
"Done Iterating through FB Photos, displaying counts now.....\n\n\n\n"
)
sleep(1)
with open('output.txt', 'w') as writer:
# Alternatively you could use
# writer.writelines(reversed(dog_breeds))
# Write the dog breeds to the file in reversed order
for tager in self.taggees.keys():
tag_message = "You have been tagged by {} , {} times \n".format(
tager, self.taggees[tager]["tag_count"])
print(tag_message)
writer.write(tag_message)
print("The first time you were tagged by them was {}".format(
self.taggees[tager]["first_tagged"]))
print("The last time you were tagged by them was {}".format(
self.taggees[tager]["last_tagged"]))
print(
"-----------------------------------------------------------------------------"
)
exit()
def mandalorian():
global UpKey,DownKey,LeftKey,RightKey,PauseKey,QuitKey,Bullet,sheildkey
tik =TicToc()
tik.tic()
STEP = 0.0001; me = person(50,9); bsp = boss(); score=0; lives=5; co=[]; ob=[]; mag=[]; dra=[]; drag=[]; bu=[]; sp=[]; shstart=0; spstart=0; dragonp=0; sheildp=0; sheildav=1; bossm=0; bb=[]; speed=1; speedp=0; time = 60; bossh=100; t=0;
bt=2000
while True:
tty.setcbreak(sys.stdin.fileno())
t+=1
sleep(0.1)
system('clear')
# key event
key_pressed()
if UpKey:
UpKey=False
me.upy(-0.2)
# if dragonp: #on for dragon movement
# me.dr-=0.02
if RightKey:
RightKey=False
me.upx(0.1)
if LeftKey:
LeftKey=False
me.upx(-0.1)
if Bullet:
Bullet=False
bu.append(spr(me.getx()+2,me.gety(),'>'))
# if DownKey: #on for dragon movement
# if dragonp:
# me.dr+=0.02
if QuitKey:
print("GAME OVER")
return
if sheildkey:
sheildkey=False
if sheildav:
sheildp=1
sheildav=0
shstart=int(tik.elapsed)
#########################################################
if t%33==0 and bossm==0:
if t%99==0:createobs(ob)
elif (t+33)%99==0:createcoins(co)
else:
i=randint(0,2)
if i==0:createobs(ob)
elif i==1:createpower(sp,'P')
else:createpower(dra,'D')
if t%100==0:
mag.append(spr(135,randint(5,35),'M'))
if t>bt: ## boss mode on
bossm=1
if speedp==1:
speed=2.5
else: speed=1.5
if dragonp==0:
me.update()
me.printp(sheildp)
else:
me.updatex()
if t%10>4:drag.append(dragon(me.getx(),me.gety()+t%5,"D"))
else: drag.append(dragon(me.getx(),me.gety()+4-t%5,"D"))
if bossm: ## boss mocd on
# bb have boss bullets
if t%4==0:
bx=95-me.getx()
by=25-me.gety()
dis = floor(sqrt((bx)**2+(by)**2))
vx=(bx/dis)*2+1
vy=(by/dis)*2
bb.append(bull(95,bsp.gety(),vx,vy,'*'))
d =0
if me.gety()-bsp.gety() > 0:d=1
bsp.update(d)
bsp.printb()
for i in bu: # bullet cause it have differt direct
i.update(-2)
if i.gety()>35:
bu.remove(i)
if i.getx()>143:
bu.remove(i)
if i.valid:
i.printsp(color.PURPLE)
else:
bu.remove(i)
for i in bb: #bossb
i.update()
if i.valid:
i.printsp(color.RED)
else:
bb.remove(i)
#boss hit me
for i in bb:
if abs(me.getx()-i.getx())<2 and abs(me.gety()-i.gety())<1:
bb.remove(i)
lives-=1
# me hit boss
for i in bu:
k=(i.gety()-bsp.gety())
if abs(95-i.getx())<=2 and k<8 and k>=0 :
bu.remove(i)
bossh-=5
else:
#coins/obstacles/powerup print
for i in co:
i.update(speed)
if i.valid:
i.printsp(color.BOLD+color.YELLOW)
else:
co.remove(i)
for j in ob:
for i in j:
i.update(speed)
if i.valid:
i.printsp(color.BOLD+color.RED)
else:
ob.remove(j)
break
for i in sp:
i.update(speed)
if i.valid:
i.printsp(color.DARKCYAN)
else:
sp.remove(i)
for i in dra:
i.update(speed)
if i.valid:
i.printsp(color.PURPLE)
else:
dra.remove(i)
for i in bu: # bullet cause it have differt direct
i.update(-2)
if i.gety()>35:
bu.remove(i)
if i.getx()>143:
bu.remove(i)
if i.valid:
i.printsp(color.PURPLE)
else:
bu.remove(i)
#coin select
for i in co:
if abs(me.getx()-i.getx())<2 and abs(me.gety()-i.gety())<1:
score+=1
co.remove(i)
#collision
for j in ob:
for i in j:
if sheildp==1:
continue
if abs(me.getx()-i.getx())<2 and abs(me.gety()-i.gety())<1:
ob.remove(j)
if dragonp==0:
lives-=1
dragonp=0
break
#bullet with obstacls
for k in bu:
for j in ob:
for i in j:
if abs(k.getx()-i.getx())<1 and (k.gety()-i.gety()<1):
ob.remove(j)
break
#powerup
for i in sp:
if abs(me.getx()-i.getx())<1 and abs(me.gety()-i.gety())<1:
sp.remove(i)
spstart=int(tik.elapsed)
speedp=1
for i in dra:
if abs(me.getx()-i.getx())<1 and abs(me.gety()-i.gety())<1:
dra.remove(i)
dragonp=1
#magnet effect
for i in mag:
if i.valid==0:
mag.remove(i)
continue
i.printsp(color.DARKCYAN)
disx=i.getx()-me.getx()
disy=i.gety()-me.gety()
dis=floor(sqrt(disx**2+disy**2))
if dis!=0:
me.upx((disx//dis)*2)
me.upy((disy//dis)*2)
i.update(speed)
#dragon if it come
for i in drag:
if i.valid==0:
drag.remove(i)
continue
i.printsp(color.GREEN)
i.update()
if dragonp==0:
drag=[]
#sky and ground
sky()
if lives==0:
print("GAME OVER")
return
tik.toc()
ct=int(tik.elapsed)
# print("\033[41;0f {},{}".format(me.x,me.y))
# print("\033[42;0f {},{}".format(me.velx,me.vely))
print("\033[1;0f score:{}".format(score))
print("\033[2;0f lives:{}".format(lives))
if sheildav==0:
if 60-(ct-shstart)>=0:
print("\033[3;0f sheild:{} ({})".format(sheildav,60-(ct-shstart)))
else:
sheildav=1
else:
print("\033[3;0f sheild:{} press t".format(sheildav))
if sheildp:
if 10-(ct-shstart)<=0:
sheildp=0
if speedp:
if 20-(ct-spstart)>=0:
print("\033[4;0f speed:{} ({})".format(speedp,20-(ct-spstart)))
else:
speedp=0
else:
print("\033[4;0f speed:{}".format(speedp))
print("\033[5;0f dragon:{}".format(dragonp))
if bossm:
print("\033[3;90f BOSS HEALTH:{}".format(bossh))
if bossh < 1 :
print("\033[10;80f YOU SAVED BABY YODA! :)")
return
time=200-ct
if time == 0:
print("TIME OVER")
return
print("\033[6;0f time:{}".format(time))
if bossm==0:
print("\033[3;50f percentage:{}".format(int((t*100)/bt)))
] + new_user_sentence + [ # + is used since new_user_sentence variable is a list
" ",
]
if option == "f": # the function will write the spelling report in the new file, if option is file
for item in spell_check_report:
item = item + "\n" # the function will change line, i.e. by adding "\n", at the end of every line
file.write(item)
return spell_check_report
# this is the main spell checking program that uses the three functions
continue_check_spelling = True
while continue_check_spelling:
time_recorded = TicToc() # using time_recorded function to count the time
time_recorded.tic() # start timing
print_lines = [
" ",
" Enter[F]. to check a [File] ",
" ",
" Enter[S]. to check a [Sentence] ",
" ",
" ",
" Enter anything else to quit ",
" ",
]
format(print_lines, False, " S P E L L C H E C K E R")
option = input("\u2517" + "\u2501" * 5 + " Enter choice: ").lower()
# If user entered "File", "Sentence", "[F]" or "S" that have f or s in it they are allow to enter the option again
if len(option) != 1:
def count_words(self):
return self.__count_words(self.root)
def __count_words(self, node, count=0):
if node.isEndOftheWord:
count += 1
for key in node.childrens.keys():
nxt_node = node.childrens[key]
count = self.__count_words(nxt_node, count)
return count
t = Trie()
clock = TicToc()
db = requests.get(
'https://raw.githubusercontent.com/dwyl/english-words/master/words_dictionary.json'
).json().keys()
for d in db:
t.insert(d)
clock.tic()
print(t.count_words())
clock.toc()
print(clock.elapsed)
path='/Users/trondkr/Dropbox/MON-data/'
files = [f for f in glob.glob(path + "EXPORTED/*.txt", recursive=False)]
totalfiles=len(files)
currentfile=0
nocounter=['NORD1_2019','NORD2_2019','OFOT1_2019','OFOT2_2019','OKS1_2019','OKS2_2019',
'SAG1_2019','SAG2_2019','SJON1_2019','SJON2_2019','TYS1_2019','TYS2_2019']
withcounter=[]
# Originally from Excel spreadsheet these files did not have Serial counter
withcounter=['OKS2_2018','NORD1_2018','NORD2_2018','OFOT1_2018','OFOT2_2018','OKS1_2018',
'OKS2_2018','SAG1_2018','SAG2_2018','SJON1_2018','SJON2_2018','TYS1_2018', 'TYS2_2018']
header="Ser Meas Salinity Temp F Opt Opml Density Press Date Time Lat Lon Depth\n"
t = TicToc()
t.tic();
print("Conversion starting\n")
for f in files:
currentfile+=1
filename_base=Path(f).resolve().stem
newfile='{}_edited.txt'.format(path+filename_base)
if os.path.exists(newfile):
os.remove(newfile)
out=open(newfile,'a')
progress=(currentfile/totalfiles*1.0)*100.
print("==> New file will be written to {} ({:3.2f}% done)".format(newfile,progress))
infile=open(f,'r')
lines=infile.readlines()
counter=0
first=True
p_map.x = x0
p_map.sa2xp = model.sa2xp_y_xdot_timedaoa
# p_map.sa2xp = model.sa2xp_y_xdot_aoa
p_map.xp2s = model.xp2s_y_xdot
s_grid_height = np.linspace(0.5, 1.5, 7)
s_grid_velocity = np.linspace(3, 8, 7)
s_grid = (s_grid_height, s_grid_velocity)
a_grid_aoa = np.linspace(00/180*np.pi, 70/180*np.pi, 21)
# a_grid = (a_grid_aoa, )
a_grid_amp = np.linspace(0.9, 1.2, 11)
a_grid = (a_grid_aoa, a_grid_amp)
grids = {'states': s_grid, 'actions': a_grid}
t = TicToc()
t.tic()
Q_map, Q_F, Q_reach = vibly.parcompute_Q_map(grids, p_map, keep_coords=True,
verbose=2)
t.toc()
print("time elapsed: " + str(t.elapsed/60))
Q_V, S_V = vibly.compute_QV(Q_map, grids)
S_M = vibly.project_Q2S(Q_V, grids, proj_opt=np.mean)
Q_M = vibly.map_S2Q(Q_map, S_M, s_grid, Q_V=Q_V)
# plt.scatter(Q_map[1], Q_map[0])
print("non-failing portion of Q: " + str(np.sum(~Q_F)/Q_F.size))
print("viable portion of Q: " + str(np.sum(Q_V)/Q_V.size))
import itertools as it
# Q0 = np.zeros((len(grids['states']), total_gridpoints))
# def create_x0(grids):
# for idx, state_action in enumerate(np.array(list(
def detect_motion(frameCount):
# grab global references to outputFrame
global outputFrame
outputFrame = None
#Create timer
timer = TicToc()
# initialize the motion detector and the total number of frames
# read thus far
md = SingleMotionDetector(accumWeight=0.2)
total = 0
record = True
# Starts recording
cap = cv2.VideoCapture(0)
out = cv2.VideoWriter(filename, get_video_type(filename), 25,
get_dims(cap, res))
# Starts Timer
timer.tic()
#Recording starts
while (record is True):
# Read video streaming frames and send it to video
ret, frame = cap.read()
out.write(frame)
# read the next frame from the video stream, resize it,
# convert the frame to grayscale, and blur it
frame = imutils.resize(frame, width=400)
gray = cv2.cvtColor(frame, cv2.COLOR_BGR2GRAY)
gray = cv2.GaussianBlur(gray, (7, 7), 0)
# if the total number of frames has reached a sufficient
# number to construct a reasonable background model, then
# continue to process the frame
if total > 32:
# detect motion in the image
motion = md.detect(gray)
#If motion is detected, restart timer
if (motion is not None):
print("motion")
timer.tic()
if (timer.toc() is not None):
# print(timer.toc())
#Stop video if motion has ceased for 10s or lock has been placed by webRTC or user has deactivated the camera
if ((motion is None and timer.toc() >= 5)
or (settings.lock is True)
or (settings.active is False)):
#Stops recording + Cleanup
cap.release()
out.release()
out = None
cap = None
md = None
total = 0
cv2.destroyAllWindows()
print("video Ends")
record = False
#Starts a new thread that will upload the video to Firebase
threading.Thread(target=upload).start()
break
# update the background model and increment the total number
# of frames read thus far
md.update(gray)
total += 1
# acquire the lock, set the output frame, and release the
# lock
#with lock:
outputFrame = frame.copy()
