Exemple #1
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    def valid(self, dropout= identity, smooth= None):
        """-> Model with new fields, teacher forcing

           output : f32 (?, dim_tgt)  prediction on logit scale
             prob : f32 (?, dim_tgt)  prediction, soft
             pred : i32 (?,)          prediction, hard
        errt_samp : f32 (?,)          errors
        loss_samp : f32 (?,)          losses
             errt : f32 ()            error rate
             loss : f32 ()            mean loss

        """
        with scope('emb_src_'): w = self.position(self.max_src) + dropout(self.emb_src(self.src))
        with scope('emb_tgt_'): x = self.position(self.max_tgt) + dropout(self.emb_tgt(self.tgt))
        w = self.encode(w, self.mask_src,                   dropout, name= 'encode_') # bds
        x = self.decode(x, self.mask_tgt, w, self.mask_src, dropout, name= 'decode_') # bdt
        with scope('logit_'):
            y = self.emb_tgt( # ?n
                tf.boolean_mask( # ?d
                    tf.transpose(x, (0,2,1)) # btd <- bdt
                    , self.mask))
        with scope('prob_'): prob = tf.nn.softmax(y, axis= -1)
        with scope('pred_'): pred = tf.argmax(y, axis= -1, output_type= tf.int32)
        with scope('errt_'):
            errt_samp = tf.to_float(tf.not_equal(self.true, pred))
            errt = tf.reduce_mean(errt_samp)
        with scope('loss_'):
            loss_samp = tf.nn.softmax_cross_entropy_with_logits_v2(labels= smooth(self.true), logits= y) \
                if smooth else tf.nn.sparse_softmax_cross_entropy_with_logits(labels= self.true, logits= y)
            loss = tf.reduce_mean(loss_samp)
        return Model(self, output= y, prob= prob, pred= pred
                     , errt_samp= errt_samp, errt= errt
                     , loss_samp= loss_samp, loss= loss)
Exemple #2
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    def data(self, sid, tid, src= None, tgt= None):
        """-> Model with new fields

        position : Sinusoid
            src_ : i32 (b, ?)     source feed, in range `[0, dim_src)`
            tgt_ : i32 (b, ?)     target feed, in range `[0, dim_tgt)`
             src : i32 (b, s)     source with `eos` trimmed among the batch
             tgt : i32 (b, t)     target with `eos` trimmed among the batch, padded with `bos`
            mask : b8  (b, t)     target sequence mask
            true : i32 (?,)       target references
         max_tgt : i32 ()         maximum target length
         max_src : i32 ()         maximum source length
        mask_tgt : f32 (1, t, t)  target attention mask
        mask_src : f32 (b, 1, s)  source attention mask

        """
        src_ = placeholder(tf.int32, (None, None), src, 'src_')
        tgt_ = placeholder(tf.int32, (None, None), tgt, 'tgt_')
        with scope('src'):
            src, msk, max_src = trim(src_, self.eos)
            mask_src = tf.log(tf.expand_dims(tf.to_float(msk), axis= 1))
        with scope('tgt'):
            tgt, msk, max_tgt = trim(tgt_, self.eos)
            mask = tf.pad(msk, ((0,0),(1,0)), constant_values= True)
            btru = tf.pad(tgt, ((0,0),(1,0)), constant_values= self.bos)
            true = tf.pad(tgt, ((0,0),(0,1)), constant_values= self.eos)
            true, tgt = tf.boolean_mask(true, mask), btru
            max_tgt += 1
            mask_tgt = tf.log(tf.expand_dims(causal_mask(max_tgt), axis= 0))
        return Model(
            position= Sinusoid(self.dim_emb, self.cap)
            , src_= src_, mask_src= mask_src, max_src= max_src, src= src
            , tgt_= tgt_, mask_tgt= mask_tgt, max_tgt= max_tgt, tgt= tgt
            , true= true, mask= mask
            , emb_src = self.embeds[sid]
            , emb_tgt = self.embeds[tid]
            , **self)
Exemple #3
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def vAe(
        mode,
        src=None,
        tgt=None,
        # model spec
        dim_tgt=8192,
        dim_emb=512,
        dim_rep=1024,
        rnn_layers=3,
        bidirectional=True,
        bidir_stacked=True,
        attentive=False,
        logit_use_embed=True,
        # training spec
        accelerate=1e-4,
        learn_rate=1e-3,
        bos=2,
        eos=1):

    # dim_tgt : vocab size
    # dim_emb : model dimension
    # dim_rep : representation dimension
    #
    # unk=0 for word dropout

    assert mode in ('train', 'valid', 'infer')
    self = Record(bos=bos, eos=eos)

    with scope('step'):
        step = self.step = tf.train.get_or_create_global_step()
        rate = accelerate * tf.to_float(step)
        rate_keepwd = self.rate_keepwd = tf.sigmoid(rate)
        rate_anneal = self.rate_anneal = tf.tanh(rate)
        rate_update = self.rate_update = learn_rate / (tf.sqrt(rate) + 1.0)

    with scope('src'):
        src = self.src = placeholder(tf.int32, (None, None), src, 'src')
        src = tf.transpose(src)  # time major order
        src, msk_src, len_src = trim(src, eos)

    with scope('tgt'):
        tgt = self.tgt = placeholder(tf.int32, (None, None), tgt, 'tgt')
        tgt = tf.transpose(tgt)  # time major order
        tgt, msk_tgt, len_tgt = trim(tgt, eos)
        msk_tgt = tf.pad(msk_tgt, ((1, 0), (0, 0)), constant_values=True)
        # pads for decoder : lead=[bos]+tgt -> gold=tgt+[eos]
        lead, gold = tgt, tf.pad(tgt,
                                 paddings=((0, 1), (0, 0)),
                                 constant_values=eos)
        if 'train' == mode:
            lead *= tf.to_int32(
                tf.random_uniform(tf.shape(lead)) < rate_keepwd)
        lead = self.lead = tf.pad(lead,
                                  paddings=((1, 0), (0, 0)),
                                  constant_values=bos)

    # s : src length
    # t : tgt length plus one padding, either eos or bos
    # b : batch size
    #
    # len_src :  b  aka s
    # msk_src : sb  without padding
    # msk_tgt : tb  with eos
    #
    #    lead : tb  with bos
    #    gold : tb  with eos

    with scope('embed'):
        b = (6 / (dim_tgt / dim_emb + 1))**0.5
        embedding = tf.get_variable('embedding', (dim_tgt, dim_emb),
                                    initializer=tf.random_uniform_initializer(
                                        -b, b))
        emb_tgt = tf.gather(embedding, lead,
                            name='emb_tgt')  # (t, b) -> (t, b, dim_emb)
        emb_src = tf.gather(embedding, src,
                            name='emb_src')  # (s, b) -> (s, b, dim_emb)

    with scope('encode'):  # (s, b, dim_emb) -> (b, dim_emb)
        reverse = partial(tf.reverse_sequence,
                          seq_lengths=len_src,
                          seq_axis=0,
                          batch_axis=1)

        if bidirectional and bidir_stacked:
            for i in range(rnn_layers):
                with scope("rnn{}".format(i + 1)):
                    emb_fwd, _ = layer_rnn(1, dim_emb, name='fwd')(emb_src)
                    emb_bwd, _ = layer_rnn(1, dim_emb,
                                           name='bwd')(reverse(emb_src))
                    hs = emb_src = tf.concat((emb_fwd, reverse(emb_bwd)),
                                             axis=-1)

        elif bidirectional:
            with scope("rnn"):
                emb_fwd, _ = layer_rnn(rnn_layers, dim_emb,
                                       name='fwd')(emb_src)
                emb_bwd, _ = layer_rnn(rnn_layers, dim_emb,
                                       name='bwd')(reverse(emb_src))
            hs = tf.concat((emb_fwd, reverse(emb_bwd)), axis=-1)

        else:
            hs, _ = layer_rnn(rnn_layers, dim_emb, name='rnn')(emb_src)

        with scope('cata'):
            # extract the final states from the outputs: bd <- sbd, b2
            h = tf.gather_nd(
                hs,
                tf.stack(
                    (len_src - 1, tf.range(tf.size(len_src), dtype=tf.int32)),
                    axis=1))
            if attentive:  # todo fixme
                # the values are the outputs from all non-padding steps;
                # the queries are the final states;
                h = layer_nrm(h + tf.squeeze(  # bd <- bd1
                    attention(  # bd1 <- bd1, bds, b1s
                        tf.expand_dims(h, axis=2),  # query: bd1 <- bd
                        tf.transpose(hs, (1, 2, 0)),  # value: bds <- sbd
                        tf.log(
                            tf.to_float(  # -inf,0  mask: b1s <- sb <- bs
                                tf.expand_dims(tf.transpose(msk_src),
                                               axis=1))),
                        int(h.shape[-1])),
                    2))

    with scope('latent'):  # (b, dim_emb) -> (b, dim_rep) -> (b, dim_emb)
        # h = layer_aff(h, dim_emb, name='in')
        mu = self.mu = layer_aff(h, dim_rep, name='mu')
        lv = self.lv = layer_aff(h, dim_rep, name='lv')
        with scope('z'):
            h = mu
            if 'train' == mode:
                h += tf.exp(0.5 * lv) * tf.random_normal(shape=tf.shape(lv))
            self.z = h
        h = layer_aff(h, dim_emb, name='ex')

    with scope('decode'):  # (b, dim_emb) -> (t, b, dim_emb) -> (?, dim_emb)
        h = self.state_in = tf.stack((h, ) * rnn_layers)
        h, _ = _, (self.state_ex, ) = layer_rnn(rnn_layers,
                                                dim_emb,
                                                name='rnn')(
                                                    emb_tgt,
                                                    initial_state=(h, ))
        if 'infer' != mode: h = tf.boolean_mask(h, msk_tgt)
        h = layer_aff(h, dim_emb, name='out')

    with scope('logits'):  # (?, dim_emb) -> (?, dim_tgt)
        if logit_use_embed:
            logits = self.logits = tf.tensordot(h, (dim_emb**-0.5) *
                                                tf.transpose(embedding), 1)
        else:
            logits = self.logits = layer_aff(h, dim_tgt)

    with scope('prob'):
        prob = self.prob = tf.nn.softmax(logits)
    with scope('pred'):
        pred = self.pred = tf.argmax(logits, -1, output_type=tf.int32)

    if 'infer' != mode:
        labels = tf.boolean_mask(gold, msk_tgt, name='labels')
        with scope('errt'):
            errt_samp = self.errt_samp = tf.to_float(tf.not_equal(
                labels, pred))
            errt = self.errt = tf.reduce_mean(errt_samp)
        with scope('loss'):
            with scope('loss_gen'):
                loss_gen_samp = self.loss_gen_samp = tf.nn.sparse_softmax_cross_entropy_with_logits(
                    labels=labels, logits=logits)
                loss_gen = self.loss_gen = tf.reduce_mean(loss_gen_samp)
            with scope('loss_kld'):
                loss_kld_samp = self.loss_kld_samp = 0.5 * (
                    tf.square(mu) + tf.exp(lv) - lv - 1.0)
                loss_kld = self.loss_kld = tf.reduce_mean(loss_kld_samp)
            loss = self.loss = rate_anneal * loss_kld + loss_gen

    if 'train' == mode:
        with scope('train'):
            train_step = self.train_step = tf.train.AdamOptimizer(
                rate_update).minimize(loss, step)

    return self
def model(mode,
          src_dwh,
          tgt_dwh,
          src_idx=None,
          len_src=None,
          tgt_img=None,
          tgt_idx=None,
          len_tgt=None,
          num_layers=3,
          num_units=512,
          learn_rate=1e-3,
          decay_rate=1e-2,
          dropout=0.1):
    assert mode in ('train', 'valid', 'infer')
    self = Record()

    src_d, src_w, src_h = src_dwh
    tgt_d, tgt_w, tgt_h = tgt_dwh

    with scope('source'):
        # input nodes
        src_idx = self.src_idx = placeholder(tf.int32, (None, None), src_idx,
                                             'src_idx')  # n s
        len_src = self.len_src = placeholder(tf.int32, (None, ), len_src,
                                             'len_src')  # n

        # time major order
        src_idx = tf.transpose(src_idx, (1, 0))  # s n
        emb_src = tf.one_hot(src_idx, src_d)  # s n v

        for i in range(num_layers):
            with scope("rnn{}".format(i + 1)):
                emb_fwd, _ = tf.contrib.cudnn_rnn.CudnnGRU(
                    1, num_units, dropout=dropout,
                    name='fwd')(emb_src, training='train' == mode)
                emb_bwd, _ = tf.contrib.cudnn_rnn.CudnnGRU(
                    1, num_units, dropout=dropout,
                    name='bwd')(tf.reverse_sequence(emb_src,
                                                    len_src,
                                                    seq_axis=0,
                                                    batch_axis=1),
                                training='train' == mode)
            emb_src = tf.concat(
                (emb_fwd,
                 tf.reverse_sequence(
                     emb_bwd, len_src, seq_axis=0, batch_axis=1)),
                axis=-1)
        # emb_src = tf.layers.dense(emb_src, num_units, name= 'reduce_concat') # s n d
        emb_src = self.emb_src = tf.transpose(emb_src, (1, 2, 0))  # n d s

    with scope('target'):
        # input nodes
        tgt_img = self.tgt_img = placeholder(tf.uint8,
                                             (None, None, tgt_h, tgt_w),
                                             tgt_img, 'tgt_img')  # n t h w
        tgt_idx = self.tgt_idx = placeholder(tf.int32, (None, None), tgt_idx,
                                             'tgt_idx')  # n t
        len_tgt = self.len_tgt = placeholder(tf.int32, (None, ), len_tgt,
                                             'len_tgt')  # n

        # time major order
        tgt_idx = tf.transpose(tgt_idx)  # t n
        tgt_img = tf.transpose(tgt_img, (1, 0, 2, 3))  # t n h w
        tgt_img = flatten(tgt_img, 2, 3)  # t n hw

        # normalize pixels to binary
        tgt_img = tf.to_float(tgt_img) / 255.0
        # tgt_img = tf.round(tgt_img)
        # todo consider adding noise

        # causal padding
        fire = self.fire = tf.pad(tgt_img, ((1, 0), (0, 0), (0, 0)),
                                  constant_values=0.0)
        true = self.true = tf.pad(tgt_img, ((0, 1), (0, 0), (0, 0)),
                                  constant_values=1.0)
        tidx = self.tidx = tf.pad(tgt_idx, ((0, 1), (0, 0)), constant_values=1)
        mask_tgt = tf.transpose(tf.sequence_mask(len_tgt + 1))  # t n

    with scope('decode'):
        # needs to get input from latent space to do attention or some shit
        decoder = self.decoder = tf.contrib.cudnn_rnn.CudnnGRU(num_layers,
                                                               num_units,
                                                               dropout=dropout)
        state_in = self.state_in = tf.zeros(
            (num_layers, tf.shape(fire)[1], num_units))
        x, _ = _, (self.state_ex, ) = decoder(fire,
                                              initial_state=(state_in, ),
                                              training='train' == mode)
        # transform mask to -inf and 0 in order to simply sum for whatever the f**k happens next
        mask = tf.log(tf.sequence_mask(len_src, dtype=tf.float32))  # n s
        mask = tf.expand_dims(mask, 1)  # n 1 s
        # multi-head scaled dot-product attention
        x = tf.transpose(x, (1, 2, 0))  # t n d ---> n d t
        attn = Attention(num_units, num_units, 2 * num_units)(x, emb_src, mask)
        if 'train' == mode: attn = tf.nn.dropout(attn, 1 - dropout)
        x = Normalize(num_units)(x + attn)
        x = tf.transpose(x, (2, 0, 1))  # n d t ---> t n d

    if 'infer' != mode:
        x = tf.boolean_mask(x, mask_tgt)
        true = tf.boolean_mask(true, mask_tgt)
        tidx = tf.boolean_mask(tidx, mask_tgt)

    with scope('output'):
        y = tf.layers.dense(x, tgt_h * tgt_w, name='dense_img')
        z = tf.layers.dense(x, tgt_d, name='logit_idx')
        pred = self.pred = tf.clip_by_value(y, 0.0, 1.0)
        prob = self.prob = tf.nn.softmax(z)
        pidx = self.pidx = tf.argmax(z, axis=-1, output_type=tf.int32)

    with scope('losses'):
        diff = true - pred
        mae = self.mae = tf.reduce_mean(tf.abs(diff), axis=-1)
        mse = self.mse = tf.reduce_mean(tf.square(diff), axis=-1)
        xid = self.xid = tf.nn.sparse_softmax_cross_entropy_with_logits(
            logits=z, labels=tidx)
        err = self.err = tf.not_equal(tidx, pidx)
        loss = tf.reduce_mean(xid)

    with scope('update'):
        step = self.step = tf.train.get_or_create_global_step()
        lr = self.lr = learn_rate / (1.0 +
                                     decay_rate * tf.sqrt(tf.to_float(step)))
        if 'train' == mode:
            down = self.down = tf.train.AdamOptimizer(lr).minimize(loss, step)

    return self