def encrypt(seed, sens_priv_num, c_factor, sensor_data):
data_size = np.size(sensor_data)
sensing_matrix = Utility.generate_sensing_matrix(
seed, round((1 - c_factor) * data_size), data_size)
compressed_data = np.dot(sensing_matrix, sensor_data)
return compressed_data * Utility.generate_secret_value(
seed, sens_priv_num)
class Logger(object):
"Class for logging tweet data"
def __init__(self, messageFileName="default"):
self.messageFileName = messageFileName
self.messageLogger = csv.writer(open( self.messageFileName, 'wb'))
self.messageLogger.writerow(["time", "code", ""])
self.tweetLogger = csv.writer(open("tweets.csv", 'a'))
self.util = Utility()
self.time = self.util.currentTimeSeconds()
self.timeLogger = csv.writer(open("timing.csv", 'wb'))
self.timeLogger.writerow(['impl', 'execTime', 'highestEmo', 'currentTime'])
def logMessage(self, code, message):
self.time = self.util.currentTimeMillis()
self.messageLogger.writerow([self.time, code, message])
print(str(self.time) + "," + str(code) + "," +
str(message) + "\n")
def logTweet(self, tweet):
self.time = self.util.currentTimeMillis()
# strip out weird chracters preventing the csv to be written
tweetText = tweet.text
cleanText = filter(lambda x: x in string.printable, tweetText)
exclude = set([',', ';'])
cleanText = ''.join(ch for ch in cleanText if ch not in exclude)
self.messageLogger.writerow([self.util.currentTimeSeconds(), tweet.created_at, cleanText, tweet.lang, tweet.location])
def logTiming(self, qualifier, execTime, highestEmo):
self.time = self.util.currentTimeMillis()
self.timeLogger.writerow([qualifier, execTime, highestEmo, self.time])
def __init__(self, search_rel_question_doc_alg_str="BM25F"):
if search_rel_question_doc_alg_str == "TF_IDF":
self.search_alg = TF_IDF
elif search_rel_question_doc_alg_str == "Frequency":
self.search_alg = Frequency
else:
self.search_alg = BM25F
Utility.set_stem()
def _on_page(self, page, domain):
self.logger.info("Searching email address on page")
clean_html = Utility.clean_html(str(page))
emails = re.findall(cfg.email_regex, clean_html, re.I)
if emails:
emails = map(Utility.normalize_email, emails)
return emails
def search_email_in_domain(self, domain):
self.check_driver()
try:
self._go_to_page(domain)
soup = BS(self.driver.page_source, "lxml")
# Find email on page and on link
_email_founds = []
for pos in POSSIBLE_POSITION:
action_list = {
'on_page': self._on_page,
'on_link': self._on_link
}
email = action_list.get(pos)(soup, domain)
_email_founds.append(email)
email_candidates = Utility.flatten_list(_email_founds)
if str(domain).endswith('.id') or str(domain).endswith('.id/'):
emails = self.search_id_domain(domain)
if emails not in email_candidates:
email_candidates += emails
if not email_candidates:
# If email not found
self.logger.info('Email not found on domain %s', domain)
# Find it using whois
return []
else:
# If email found, filter it
final_candidates = self._filter_email_candidates(
email_candidates)
return self.sort_email(final_candidates, domain)
except Exception as exc:
print "Error on domain {} {} ".format(domain, str(exc))
return []
def DiffImage(self: Any, source: Dict[str, Any]) -> None:
"""Diff the provided image data source."""
filename: str = source["filename"]
url: str = source["url"]
allowRevert: bool = source.get("allowRevert", True)
# Append the current timestamp to the end of the URL as an
# attempt to prevent the Discord CDN from serving previously
# cached versions of an image.
timestamp: str = str(int(datetime.utcnow().timestamp()))
imageUrl: str = f"{url}?{timestamp}"
older: Dict[str, Any] = source["older"]
old: Dict[str, Any] = source["old"]
new: Dict[str, Any] = source["new"]
if old["raw"] == new["raw"]:
logger.info(f"No difference found in {filename} ({url})")
return
elif (allowRevert is False) and (older["raw"] == new["raw"]):
logger.info(f"Ignored revert found in {filename} ({url})")
return
source["urlTrim"] = Utility.Truncate(self, url, 256)
old["size"] = Utility.Base64Size(self, old["raw"])
new["size"] = Utility.Base64Size(self, new["raw"])
success: bool = SitRep.Notify(
self,
{
"title": source["urlTrim"],
"description": None,
"url": url,
"filename": source["filename"],
"imageUrl": imageUrl,
"size": Utility.CountRange(self, new["size"], old["size"]) + " bytes",
"diffUrl": source["old"]["gist"].html_url + "/revisions",
},
)
# Ensure no changes go without notification
if success is True:
Utility.UpdateGist(self, source)
def _find_keyword_in_url(self, links, domain):
# Get all url and normalize it
normalized_links = self._normalize_elems(links)
# Filter url that doesn't contain keyword
candidate_links = \
filter(lambda x:
self._is_contain_keyword(x.replace(Utility.find_domain_name(domain), '')), normalized_links)
return candidate_links
def __init__(self, messageFileName="default"):
self.messageFileName = messageFileName
self.messageLogger = csv.writer(open( self.messageFileName, 'wb'))
self.messageLogger.writerow(["time", "code", ""])
self.tweetLogger = csv.writer(open("tweets.csv", 'a'))
self.util = Utility()
self.time = self.util.currentTimeSeconds()
def filter_train_dataset(train_df):
filtered_indices = []
for question_id in tqdm(train_df.question_id.unique(), total=train_df.question_id.nunique()):
train_df_part = train_df[train_df.question_id == question_id]
question = train_df_part.question_lem.values[0]
sentences = train_df_part.sentence_lem.values
filtered = Utility.filter_by_question_sentence_words_intersect(question, sentences)
filtered_indices.extend(np.array(train_df_part.index)[np.array(filtered)])
train_df_filtered = train_df[~train_df.index.isin(filtered_indices)]
return train_df_filtered
def sort_email(self, emails, domain):
# If this is not governor's domain, do not get any email candidate with .go.id domain name
if '.go.id' not in domain:
emails = [email for email in emails if '.go.id' not in emails]
domain_name = Utility.find_domain_name(domain)
emails = map(lambda email: (email, domain_name), emails)
# Sort based on score descending
emails.sort(cmp=lambda a, b: -1
if self.email_scoring(a) > self.email_scoring(b) else 0)
emails = [x for x, y in emails]
return emails[:cfg.max_email]
def save():
try:
print("User %s logged in!" % request.form['fname'])
db = mysql.connector.connect(host=host,
user=user,
password=password,
database=database)
cursor = db.cursor(buffered=True)
util = Util()
status, uid = util.saveUser(db, cursor, request)
if status and status == 200:
return render_template("thankyou.html",
fname=request.form['fname'],
uid=uid)
raise Exception("Unable to insert data!")
except Exception as e:
print(json.dumps({"error": str(e)}))
return "<h1>Oops! Something went wrong.. Could you try after sometime or reach out to the host!</h1>"
finally:
db.close()
cursor.close()
def _on_link(self, page, domain):
self.logger.info("Search email address on link to another page")
_email_founds = []
# Find all possible link element
links = page.findAll('a')
# Find all candidate link with keyword on html page
keyword_html_link = self._find_keyword_in_html_text(links)
# Find all candidate link with keyword on url
keyword_url_link = self._find_keyword_in_url(links, domain)
# Merge the url result, remove duplicate url
candidate_links = Utility.uniquify(keyword_html_link +
keyword_url_link)
# Check for invalid url and try to fix it
invalid_url = [
uri for uri in candidate_links if not cfg.url_regex.match(uri)
]
try_fix_invalid_url = map(
lambda _uri: Utility.normalize_invalid_url(_uri, domain),
invalid_url)
# Filter invalid url
candidate_links = candidate_links + try_fix_invalid_url
candidate_links = Utility.uniquify(
[_uri for _uri in candidate_links if cfg.url_regex.match(_uri)])
try:
for link in candidate_links:
self.logger.info("Go to next link: " + link)
try:
self._go_to_page(link)
except Exception, err:
print str(err)
continue
soup = BS(self.driver.page_source, "lxml")
email = self._on_page(soup, domain)
_email_founds.append(email)
return _email_founds if not _email_founds else Utility.flatten_list(
_email_founds)
def create_database(self, df, database_origin_dir='../data/database_origin', database_lem_dir='../data/database_lem'
):
if not os.path.exists(database_origin_dir):
os.mkdir(database_origin_dir)
if not os.path.exists(database_lem_dir):
os.mkdir(database_lem_dir)
for paragraph in tqdm(df.paragraph.unique(), total=df.paragraph.nunique()):
paragraph_id = (df[df.paragraph == paragraph].paragraph_id.values[0])
with open("{}/{}.txt".format(database_origin_dir, paragraph_id), 'w') as fout:
fout.write(paragraph)
txt_lemm = Utility.lemmatize(paragraph)
with open("{}/{}.txt".format(database_lem_dir, paragraph_id), 'w') as fout:
fout.write(txt_lemm)
def Initialize(self: Any) -> None:
"""Initialize SitRep and begin primary functionality."""
logger.info("SitRep")
logger.info("https://github.com/EthanC/SitRep")
self.config: Dict[str, Any] = SitRep.LoadConfig(self)
SitRep.SetupLogging(self)
self.git: Github = Utility.GitLogin(self)
for source in self.config["dataSources"]:
SitRep.ProcessDataSource(self, source)
logger.success("Finished processing data sources")
def main():
'''Main function of the script'''
paused = False
logger = CliLogger()
screen = Screen()
resources = Resources()
analytics = Analytics(logger)
cooldown = Cooldown(COOLDOWNS)
analytics.ignore = ANALYTICS_IGNORE
resources.load(analytics)
utility = Utility(logger, screen, resources, analytics, cooldown)
logic = Logic(utility)
try:
handle = wait_league_window(logger, (0, 0, 1024, 768))
except CantForgroundWindowError:
pass
logger.log('Press and hold x to exit bot.')
screen.d3d.capture(target_fps=10, region=find_rect(handle))
while True:
try:
if keyboard.is_pressed('x'):
raise BotExitException
if keyboard.is_pressed('ctrl+u'):
paused = False
if paused:
time.sleep(0.1)
continue
if keyboard.is_pressed('ctrl+p'):
paused = True
logger.log(
'Bot paused. Press ctrl+u to unpause. Press x to exit.')
continue
logic.tick()
time.sleep(random.randint(*TICK_INTERVAL) / 1000)
except BotContinueException as exp:
time.sleep(random.randint(*exp.tick_interval) / 1000)
except NoCharacterInMinimap:
time.sleep(1)
except BotExitException:
screen.d3d.stop()
break
except Exception: # pylint:disable=broad-except
traceback.print_exc()
screen.d3d.stop()
break
def _filter_email_candidates(candidates):
# Remove duplicate element
candidates = Utility.uniquify(
map(lambda email: str(email).strip().lower(),
[] if not candidates else candidates))
# Filter email that contain blacklist word
candidates = filter(
lambda email: not re.match(cfg.get_blacklist_regex(), email),
candidates)
# Filter short email
candidates = [
candidate for candidate in candidates if len(candidate) > 5
]
# Filter email that contain newline and space
candidates = [
candidate for candidate in candidates if '\n' not in candidate
and ' ' not in candidate and '\t' not in candidate
]
return candidates
def create_train_dataset(errors, data_dir='../notebooks/bm25f', database_dir="../data/database_origin"):# polyglot works with origin text to split into sentences
df_dict = {}
for f in tqdm(os.listdir(data_dir)):
question_id = int(f.split('.')[0])
if f.endswith('.npy') and question_id not in errors:
res = {}
for doc_number, doc_id in enumerate(np.load('{}/{}'.format(data_dir, f))):
with open("{}/{}.txt".format(database_dir, doc_id)) as fin:
res[doc_number] = Utility.sentence_splitter(fin.read())
df_dict[question_id] = res
df_with_list_of_docs = pd.DataFrame.from_records(df_dict).T
df_with_list_of_sentences = pd.DataFrame()
for col in df_with_list_of_docs.columns:
df_per_doc = df_with_list_of_docs.apply(lambda x: pd.Series(x[col]), axis=1).stack().reset_index(level=1, drop=True).to_frame()
df_per_doc['doc_number'] = col
df_with_list_of_sentences = pd.DataFrame.append(
df_with_list_of_sentences,
df_per_doc
)
df_with_list_of_sentences = df_with_list_of_sentences.reset_index()
df_with_list_of_sentences.columns = ['question_id', 'sentence', 'doc_number']
return df_with_list_of_sentences
"avatar_url": self.config["discord"]["avatarUrl"],
"embeds": [
{
"title": embed.get("title"),
"description": embed.get("description"),
"url": embed.get("url"),
"timestamp": datetime.utcnow().isoformat(),
"color": int("66BB6A", base=16),
"footer": {
"text": embed.get("filename"),
},
"image": {"url": embed.get("imageUrl")},
"author": {
"name": "SitRep",
"url": "https://github.com/EthanC/SitRep",
"icon_url": "https://i.imgur.com/YDZgxh2.png",
},
"fields": fields,
}
],
}
return Utility.POST(self, self.config["discord"]["webhookUrl"], payload)
if __name__ == "__main__":
try:
SitRep.Initialize(SitRep)
except KeyboardInterrupt:
exit()
def decrypt(seed, sensor_priv_num, org_data_len, n_nonzero_coefs, enc_data):
enc_data /= Utility.generate_secret_value(seed, sensor_priv_num)
enc_data_size = np.size(enc_data)
sensing_matrix = Utility.generate_sensing_matrix(seed, enc_data_size, org_data_len)
omp = orthogonal_mp(sensing_matrix, enc_data, n_nonzero_coefs = n_nonzero_coefs)
return omp
base_dir = str(Path.home())
default_args = {
'owner': 'user',
'depends_on_past': False,
'start_date': dt.datetime.strptime('2018-07-29T00:00:00',
'%Y-%m-%dT%H:%M:%S'),
'provide_context': True
}
# Instantiate the DAG
dag = DAG('dag1',
default_args=default_args,
schedule_interval='0 0 * * *',
max_active_runs=1) # scheduled to run everyday at midnight
util = Utility(news_api_key='', s3_bucket='')
# get all sources in english language
def sources(**kwargs):
#sourcesCsvString=util.getSources('business','en','in')
sourcesCsvString = util.getSources(language='en')
return sourcesCsvString
# get top headlines for list of sources given
def headlines(**kwargs):
ti = kwargs['ti']
v1 = ti.xcom_pull(task_ids='gettingsources'
) # xcom pull used to get values from the sources task
csvFilesList = util.getheadlines(v1)
#!/usr/bin/python3
from pathlib import Path
import os
import sys
libPath = os.path.join(Path(__file__).absolute().parent.parent, 'pyuval/')
sys.path.append(libPath)
from config import Config
from utils import Utility
util = Utility()
config = Config()
memoryData = util.readDataFromMemoy(config.get('ksm:gpg:shm:address'))
print(memoryData)
parser.add_argument("-l",
"--list",
help="list all yubikeys in database",
action="store_true",
default=False,
dest="list")
parser.add_argument("-s",
"--subsystem",
help="Subsystem to apply action [client, yubikey]",
default=None,
type=str,
dest="subsystem")
args = parser.parse_args()
util = Utility()
config = Config()
log = PyuvalLogging(ModuleName="ManagePyuval")
if 'SUDO_USER' in os.environ:
user = os.environ['SUDO_USER']
else:
user = os.environ['USER']
ksmDb = Database(**config.get('ksm:db'))
if args.subsystem == "yubikey":
if args.add:
serial = input('Serial: ').strip()
username = input('Username: '******'Public ID: ').strip()
def get_base_stats(question, sentences, question_lem, sentences_lem, idfs, idfs_lem):
unique_word_count_scores, unique_word_percent_scores, sentence_len, bm25f_scores, tf_idf_scores = Utility.stats(question, sentences, idfs)
unique_lem_word_count_scores, unique_lem_word_percent_scores, sentence_lem_len, bm25f_lem_scores, tf_idf_lem_scores = Utility.stats(question_lem, sentences_lem, idfs_lem)
s = pd.Series([
unique_word_count_scores,
unique_lem_word_count_scores,
unique_word_percent_scores,
unique_lem_word_percent_scores,
sentence_len,
sentence_lem_len,
bm25f_scores,
bm25f_lem_scores,
tf_idf_scores,
tf_idf_lem_scores,
sentences,
sentences_lem,
])
return pd.DataFrame.from_items(zip(s.index, s.values))
def training(args):
source = EventField(fix_length=args.event_size, embed_size=args.src_embed)
mask_flag = 'tmpl' in args.net
sentence_size = args.sentence_size if args.truncate else None
reverse_decode = args.reverse_decode
if 'disc' in args.net:
target = TextAndContentWordField(start_token=None,
fix_length=sentence_size,
mask_player=mask_flag,
mask_team=mask_flag,
numbering=args.numbering,
reverse=reverse_decode,
bpc=args.bpc,
multi_tag=args.multi_tag)
else:
target = TextField(start_token=None,
fix_length=sentence_size,
mask_player=mask_flag,
mask_team=mask_flag,
numbering=args.numbering,
reverse=reverse_decode,
bpc=args.bpc,
multi_tag=args.multi_tag)
if args.truncate:
train = OptaDataset(path=args.dataset + '.train',
fields={
'source': source,
'target': target
})
else:
train = OptaDataset(path=args.dataset + '.train',
fields={
'source': source,
'target': target
},
limit_length=args.limit)
source.build_vocabulary(train.source)
target.build_vocabulary(train.target, size=args.vocab_size)
target.player_to_id = source.player_to_id
target.players = source.id_to_player
if mask_flag or 'disc' in args.net:
content_word_to_id = getattr(target, 'content_word_to_id', None)
target_test = TestTextField(source.id_to_player,
source.id_to_team,
target.word_to_id,
content_word_to_id,
target.unk_id,
fix_length=None,
bpc=args.bpc)
else:
target_test = TextField(start_token=None,
end_token=None,
fix_length=None,
bpc=args.bpc)
target_test.word_to_id = target.word_to_id
target_test.id_to_word = target.id_to_word
target_test.unk_id = target.unk_id
dev = OptaDataset(path=args.dataset + '.dev',
fields={
'source': source,
'target': target_test
},
limit_length=args.limit)
train2 = OptaDataset(path=args.dataset + '.train',
fields={
'source': source,
'target': target_test
},
limit_length=args.limit)
test = OptaDataset(path=args.dataset + '.test',
fields={
'source': source,
'target': target_test
})
test20 = OptaDataset(path=args.dataset + '.test',
fields={
'source': source,
'target': target_test
},
limit_length=20)
test15 = OptaDataset(path=args.dataset + '.test',
fields={
'source': source,
'target': target_test
},
limit_length=15)
test10 = OptaDataset(path=args.dataset + '.test',
fields={
'source': source,
'target': target_test
},
limit_length=10)
start_id, end_id = target.word_to_id['<s>'], target.word_to_id['</s>']
class_weight = compute_class_weight('./dataset/player_list.txt',
target.word_to_id,
args.class_weight[0],
args.class_weight[1],
gpu=args.gpu)
dirname = Utility.get_save_directory(
args.net, './debug' if args.debug else args.output)
if args.debug:
save_path = os.path.join('./debug', dirname)
else:
save_path = os.path.join(args.output, dirname)
Utility.make_directory(save_path)
del args.vocab_size
setting = {
'vocab_size': len(target.word_to_id),
'type_size': len(source.type_to_id),
'player_size': len(source.player_to_id),
'team_size': len(source.team_to_id),
'detail_size': len(source.detail_to_id),
'detail_dim': source.details_dimention,
'start_id': start_id,
'end_id': end_id,
'unk_id': target.unk_id,
'save_path': save_path,
**vars(args)
}
dump_setting(setting, os.path.join(save_path, 'setting.yaml'))
home_player_tag = target.word_to_id.get(target.home_player_tag)
away_player_tag = target.word_to_id.get(target.away_player_tag)
home_team_tag = target.word_to_id.get(target.home_team_tag)
away_team_tag = target.word_to_id.get(target.away_team_tag)
print('vocab size: {}'.format(len(target.word_to_id)))
if args.net == 'plain':
model = MLPEncoder2AttentionDecoder(len(source.type_to_id),
len(source.player_to_id),
len(source.team_to_id),
len(source.detail_to_id),
source.details_dimention,
args.src_embed,
args.event_size,
len(target.word_to_id),
args.trg_embed,
args.hidden,
start_id,
end_id,
class_weight,
args.mlp_layers,
args.max_length,
args.dropout,
IGNORE_LABEL,
reverse_decode=reverse_decode)
elif args.net == 'tmpl':
model = MLPEncoder2AttentionDecoder(len(source.type_to_id),
len(source.player_to_id),
len(source.team_to_id),
len(source.detail_to_id),
source.details_dimention,
args.src_embed,
args.event_size,
len(target.word_to_id),
args.trg_embed,
args.hidden,
start_id,
end_id,
class_weight,
args.mlp_layers,
args.max_length,
args.dropout,
IGNORE_LABEL,
source.id_to_player,
home_player_tag,
away_player_tag,
source.id_to_team,
home_team_tag,
away_team_tag,
target.player_to_id,
target.players,
reverse_decode=reverse_decode)
elif args.net == 'gate':
model = MLPEncoder2GatedAttentionDecoder(len(source.type_to_id),
len(source.player_to_id),
len(source.team_to_id),
len(source.detail_to_id),
source.details_dimention,
args.src_embed,
args.event_size,
len(target.word_to_id),
args.trg_embed,
args.hidden,
start_id,
end_id,
class_weight,
args.mlp_layers,
args.max_length,
args.dropout,
IGNORE_LABEL,
reverse_decode=reverse_decode)
elif args.net == 'gate-tmpl':
model = MLPEncoder2GatedAttentionDecoder(len(source.type_to_id),
len(source.player_to_id),
len(source.team_to_id),
len(source.detail_to_id),
source.details_dimention,
args.src_embed,
args.event_size,
len(target.word_to_id),
args.trg_embed,
args.hidden,
start_id,
end_id,
class_weight,
args.mlp_layers,
args.max_length,
args.dropout,
IGNORE_LABEL,
source.id_to_player,
home_player_tag,
away_player_tag,
source.id_to_team,
home_team_tag,
away_team_tag,
target.player_to_id,
target.players,
reverse_decode=reverse_decode)
elif args.net == 'disc':
model = DiscriminativeMLPEncoder2AttentionDecoder(
len(source.type_to_id),
len(source.player_to_id),
len(source.team_to_id),
len(source.detail_to_id),
source.details_dimention,
args.src_embed,
args.event_size,
len(target.word_to_id),
len(target.content_word_to_id),
args.trg_embed,
args.hidden,
start_id,
end_id,
class_weight,
args.loss_weight,
args.disc_loss,
args.loss_func,
args.mlp_layers,
args.max_length,
args.dropout,
IGNORE_LABEL,
reverse_decode=reverse_decode)
elif args.net == 'disc-tmpl':
model = DiscriminativeMLPEncoder2AttentionDecoder(
len(source.type_to_id),
len(source.player_to_id),
len(source.team_to_id),
len(source.detail_to_id),
source.details_dimention,
args.src_embed,
args.event_size,
len(target.word_to_id),
len(target.content_word_to_id),
args.trg_embed,
args.hidden,
start_id,
end_id,
class_weight,
args.loss_weight,
args.disc_loss,
args.loss_func,
args.mlp_layers,
args.max_length,
args.dropout,
IGNORE_LABEL,
source.id_to_player,
home_player_tag,
away_player_tag,
source.id_to_team,
home_team_tag,
away_team_tag,
target.player_to_id,
target.players,
reverse_decode=reverse_decode)
elif args.net == 'gate-disc':
model = DiscriminativeMLPEncoder2GatedAttentionDecoder(
len(source.type_to_id),
len(source.player_to_id),
len(source.team_to_id),
len(source.detail_to_id),
source.details_dimention,
args.src_embed,
args.event_size,
len(target.word_to_id),
len(target.content_word_to_id),
args.trg_embed,
args.hidden,
start_id,
end_id,
class_weight,
args.loss_weight,
args.disc_loss,
args.loss_func,
args.mlp_layers,
args.max_length,
args.dropout,
IGNORE_LABEL,
reverse_decode=reverse_decode)
elif args.net == 'gate-disc-tmpl':
model = DiscriminativeMLPEncoder2GatedAttentionDecoder(
len(source.type_to_id),
len(source.player_to_id),
len(source.team_to_id),
len(source.detail_to_id),
source.details_dimention,
args.src_embed,
args.event_size,
len(target.word_to_id),
len(target.content_word_to_id),
args.trg_embed,
args.hidden,
start_id,
end_id,
class_weight,
args.loss_weight,
args.disc_loss,
args.loss_func,
args.mlp_layers,
args.max_length,
args.dropout,
IGNORE_LABEL,
source.id_to_player,
home_player_tag,
away_player_tag,
source.id_to_team,
home_team_tag,
away_team_tag,
target.player_to_id,
target.players,
reverse_decode=reverse_decode)
elif args.net == 'conv-gate-disc-tmpl':
model = DiscriminativeGLUEncoder2GatedAttentionDecoder(
len(source.type_to_id),
len(source.player_to_id),
len(source.team_to_id),
len(source.detail_to_id),
source.details_dimention,
args.src_embed,
args.event_size,
len(target.word_to_id),
len(target.content_word_to_id),
args.trg_embed,
args.hidden,
start_id,
end_id,
class_weight,
args.loss_weight,
args.disc_loss,
args.loss_func,
args.mlp_layers,
args.max_length,
args.dropout,
IGNORE_LABEL,
source.id_to_player,
home_player_tag,
away_player_tag,
source.id_to_team,
home_team_tag,
away_team_tag,
target.player_to_id,
target.players,
reverse_decode=reverse_decode)
model.keyword_ids = [
target.word_to_id['save'], target.word_to_id['block'],
target.word_to_id['chance'], target.word_to_id['shot'],
target.word_to_id['clearance'], target.word_to_id['kick'],
target.word_to_id['ball'], target.word_to_id['blocked'],
target.word_to_id['denied']
]
model.id_to_word = target.id_to_word
if args.numbering:
model.player_id = target.player_id
model.team_id = target.team_id
if args.gpu is not None:
model.use_gpu(args.gpu)
opt = optimizers.Adam(args.lr)
opt.setup(model)
if args.clipping > 0:
opt.add_hook(GradientClipping(args.clipping))
if args.decay > 0:
opt.add_hook(WeightDecay(args.decay))
N = len(train.source)
batch_size = args.batch
order_provider = OrderProvider(Sampling.get_random_order(N))
src_train_iter = SequentialIterator(train.source,
batch_size,
order_provider,
args.event_size,
source.fillvalue,
gpu=args.gpu)
if 'disc' in args.net:
trg_train_iter = TextAndLabelIterator(train.target,
batch_size,
order_provider,
args.sentence_size,
IGNORE_LABEL,
gpu=args.gpu)
else:
trg_train_iter = SequentialIterator(train.target,
batch_size,
order_provider,
args.sentence_size,
IGNORE_LABEL,
gpu=args.gpu)
src_dev_iter = SequentialIterator(dev.source,
batch_size,
None,
args.event_size,
source.fillvalue,
gpu=args.gpu)
trg_dev_iter = Iterator(dev.target,
batch_size,
wrapper=EndTokenIdRemoval(end_id),
gpu=None)
src_test_iter = SequentialIterator(test.source,
batch_size,
None,
args.event_size,
source.fillvalue,
gpu=args.gpu)
src_test20_iter = SequentialIterator(test20.source,
batch_size,
None,
args.event_size,
source.fillvalue,
gpu=args.gpu)
src_test15_iter = SequentialIterator(test15.source,
batch_size,
None,
args.event_size,
source.fillvalue,
gpu=args.gpu)
src_test10_iter = SequentialIterator(test10.source,
batch_size,
None,
args.event_size,
source.fillvalue,
gpu=args.gpu)
src_train2_iter = SequentialIterator(train2.source,
batch_size,
None,
args.event_size,
source.fillvalue,
gpu=args.gpu)
trg_train2_iter = Iterator(train2.target,
batch_size,
wrapper=EndTokenIdRemoval(end_id),
gpu=None)
trg_test_iter = Iterator(test.target,
batch_size,
wrapper=EndTokenIdRemoval(end_id),
gpu=None)
trg_test20_iter = Iterator(test20.target,
batch_size,
wrapper=EndTokenIdRemoval(end_id),
gpu=None)
trg_test15_iter = Iterator(test15.target,
batch_size,
wrapper=EndTokenIdRemoval(end_id),
gpu=None)
trg_test10_iter = Iterator(test10.target,
batch_size,
wrapper=EndTokenIdRemoval(end_id),
gpu=None)
if 'disc' in args.net:
trainer = Seq2SeqWithLabelTrainer(
model, opt, src_train_iter, trg_train_iter, src_dev_iter,
trg_dev_iter, order_provider, evaluate_bleu_and_accuracy,
args.epoch, save_path, args.eval_step, src_train2_iter,
trg_train2_iter)
else:
trainer = Seq2SeqTrainer(model, opt, src_train_iter, trg_train_iter,
src_dev_iter, trg_dev_iter, order_provider,
evaluate_bleu, args.epoch, save_path,
args.eval_step, src_train2_iter,
trg_train2_iter)
trainer.run()
# load best model
model.load_model(os.path.join(save_path, 'best.model'))
if 'disc' in args.net:
bleu_score_dev, _, _ = evaluate_bleu_and_accuracy(
model, src_dev_iter, trg_dev_iter)
bleu_score, _, _ = evaluate_bleu_and_accuracy(model, src_test_iter,
trg_test_iter)
bleu_score20, _, hypotheses = evaluate_bleu_and_accuracy(
model, src_test20_iter, trg_test20_iter)
bleu_score15, _, _ = evaluate_bleu_and_accuracy(
model, src_test15_iter, trg_test15_iter)
bleu_score10, _, _ = evaluate_bleu_and_accuracy(
model, src_test10_iter, trg_test10_iter)
else:
bleu_score_dev, _ = evaluate_bleu(model, src_dev_iter, trg_dev_iter)
bleu_score, _ = evaluate_bleu(model, src_test_iter, trg_test_iter)
bleu_score20, hypotheses = evaluate_bleu(model, src_test20_iter,
trg_test20_iter)
bleu_score15, _ = evaluate_bleu(model, src_test15_iter,
trg_test15_iter)
bleu_score10, _ = evaluate_bleu(model, src_test10_iter,
trg_test10_iter)
TextFile(os.path.join(save_path, 'hypotheses.txt'),
[' '.join(ys) for ys in trainer.hypotheses]).save()
print('dev score: {}'.format(bleu_score_dev))
print('test score: {}'.format(bleu_score))
print('test score20: {}'.format(bleu_score20))
print('test score15: {}'.format(bleu_score15))
print('test score10: {}'.format(bleu_score10))
# saving fields
pickle_dump(os.path.join(save_path, 'source.pkl'), source)
pickle_dump(os.path.join(save_path, 'target.pkl'), target)
pickle_dump(os.path.join(save_path, 'target_test.pkl'), target_test)
def predict_on_test(self):
"""
This function will load the test dataset, pre-process the test
images and check the performance of the trained models on unseen
data. This will also save the confusion matrix and classification
report as csv file in seperate dataframes for each model and for
each stage, in the evaluation directory.
Arguments:
-size_dict : Contains information about the image input image sizes for each of the models
-model_name : Name of the model, for example - vgg16, inception_v3, resnet50 etc
-stage_no : The training stage of the model. You will have a choice to select the number
of training stages. In stage 1, we only fine tune the top 2 dense layers by
freezing the convolution base. In stage 2, we will re adjust the weights trained
in stage 1 by training the top convolution layers, by freezing the dense layers.
"""
print("\nStarting model evaluation for stage {}..".format(
self.stage_no))
#Create an utility class object to access the class methods
utils_obj = Utility(self.input_params, self.path_dict)
df_test = utils_obj.load_data("test")
test_datagen = ImageDataGenerator(
preprocessing_function=utils_obj.init_preprocess_func())
test_generator = test_datagen.flow_from_dataframe(
dataframe=df_test,
directory=self.path_dict['source'],
target_size=utils_obj.init_sizes(),
x_col="filenames",
y_col="class_label",
batch_size=1,
class_mode='categorical',
color_mode='rgb',
shuffle=False)
nb_test_samples = len(test_generator.classes)
model = utils_obj.get_models(self.stage_no)
class_indices = test_generator.class_indices
def label_class(cat_name):
return (class_indices[cat_name])
df_test['true'] = df_test['class_label'].apply(
lambda x: label_class(str(x)))
y_true = df_test['true'].values
#Predictions (Probability Scores and Class labels)
y_pred_proba = model.predict_generator(test_generator,
nb_test_samples // 1)
y_pred = np.argmax(y_pred_proba, axis=1)
df_test['predicted'] = y_pred
df_test.to_csv(self.path_dict["eval_path"] +
"stage{}/".format(self.stage_no) +
'{}_predictions_stage_{}.csv'.format(
self.input_params['model_name'], self.stage_no))
dictionary = dict(zip(df_test.true.values, df_test.class_label.values))
#Confusion Matrixs
cm = metrics.confusion_matrix(y_true, y_pred)
df_cm = pd.DataFrame(cm).transpose()
df_cm = df_cm.rename(mapper=dict,
index=dictionary,
columns=dictionary,
copy=True,
inplace=False)
df_cm.to_csv(self.path_dict["eval_path"] +
"stage{}/".format(self.stage_no) +
'{}_cm_stage_{}.csv'.format(
self.input_params['model_name'], self.stage_no))
print('Confusion matrix prepared and saved..')
#Classification Report
report = metrics.classification_report(y_true,
y_pred,
target_names=list(
class_indices.keys()),
output_dict=True)
df_rep = pd.DataFrame(report).transpose()
df_rep.to_csv(self.path_dict["eval_path"] +
"stage{}/".format(self.stage_no) +
'{}_class_report_stage_{}.csv'.format(
self.input_params['model_name'], self.stage_no))
print('Classification report prepared and saved..')
EvalUtils.plot_confusion_matrix(
self, y_true, y_pred, list(test_generator.class_indices.keys()))
#General Metrics
df_metrics = EvalUtils.get_metrics(self, y_true, y_pred)
df_metrics.to_csv(self.path_dict["eval_path"] +
"stage{}/".format(self.stage_no) +
'{}_metrics_stage_{}.csv'.format(
self.input_params['model_name'], self.stage_no))
history_df = pd.read_csv(
self.path_dict["model_path"] + "stage{}/".format(self.stage_no) +
"{}_history_stage_{}.csv".format(self.input_params['model_name'],
self.stage_no))
#Get the train vs validation loss for all epochs
EvalUtils.plt_epoch_error(self, history_df)
#Generate a complete report and save it as an HTML file in the evaluation folder location
EvalUtils.get_complete_report(self, y_true, y_pred, class_indices)
This file primarily performs
(a) indexing the input file
(b) persisting the indices locally
(c) using indices to return search results for a given query
"""
import time
import sys
from optparse import OptionParser
import utils.Utility as utility
from core.Indexing import BuiltFileIndex
from core.Searching import SearchIndex
if __name__ == "__main__":
startTime = time.time()
print("Starting: {}".format(utility.get_date_time(startTime)))
try:
parser = OptionParser()
parser.add_option("-f", "--file", dest="file")
# parse the input
(options, args) = parser.parse_args()
# get the to be indexed file
input_file = options.file
# if not present throw exception
if input_file is None:
raise Exception("Missing Input File!")
def ProcessDataSource(self: Any, source: Dict[str, Any]) -> None:
"""Prepare to diff the provided data source."""
source["hash"] = Utility.MD5(self, source["url"])
source["older"] = {}
source["old"] = {}
source["new"] = {}
older: Dict[str, Any] = source["older"]
old: Dict[str, Any] = source["old"]
new: Dict[str, Any] = source["new"]
format: str = source["contentType"].upper()
allowRevert: bool = source.get("allowRevert", True)
if format == "JSON":
source["ext"] = "json"
source["filename"] = source["hash"] + "." + source["ext"]
old["gist"] = Utility.GetGist(self, source["filename"])
new["raw"] = Utility.FormatJSON(self, Utility.GET(self, source["url"]))
if old["gist"] is False:
return
elif (new["raw"] is not None) and (old["gist"] is not None):
if allowRevert is False:
older["raw"] = Utility.FormatJSON(
self,
Utility.GetGistRaw(self, old["gist"], source["filename"], 1),
)
old["raw"] = Utility.FormatJSON(
self, Utility.GetGistRaw(self, old["gist"], source["filename"])
)
SitRep.DiffJSON(self, source)
elif (new["raw"] is not None) and (old["gist"] is None):
Utility.CreateGist(self, source)
elif format == "IMAGE":
source["ext"] = "txt"
source["filename"] = source["hash"] + "." + source["ext"]
old["gist"] = Utility.GetGist(self, source["filename"])
new["raw"] = Utility.Base64(
self, Utility.GET(self, source["url"], raw=True)
)
if old["gist"] is False:
return
elif (new["raw"] is not None) and (old["gist"] is not None):
if allowRevert is False:
older["raw"] = Utility.GetGistRaw(
self, old["gist"], source["filename"], 1
)
old["raw"] = Utility.GetGistRaw(self, old["gist"], source["filename"])
SitRep.DiffImage(self, source)
elif (new["raw"] is not None) and (old["gist"] is None):
Utility.CreateGist(self, source)
elif format == "TEXT":
source["ext"] = source.get("fileType", "txt")
source["filename"] = source["hash"] + "." + source["ext"]
old["gist"] = Utility.GetGist(self, source["filename"])
new["raw"] = Utility.GET(self, source["url"])
if old["gist"] is False:
return
elif (new["raw"] is not None) and (old["gist"] is not None):
if allowRevert is False:
older["raw"] = Utility.GetGistRaw(
self, old["gist"], source["filename"], 1
)
old["raw"] = Utility.GetGistRaw(self, old["gist"], source["filename"])
SitRep.DiffText(self, source)
elif (new["raw"] is not None) and (old["gist"] is None):
Utility.CreateGist(self, source)
else:
logger.error(f"Data source with content type {format} is not supported")
logger.debug(source)
try:
for link in candidate_links:
self.logger.info("Go to next link: " + link)
try:
self._go_to_page(link)
except Exception, err:
print str(err)
continue
soup = BS(self.driver.page_source, "lxml")
email = self._on_page(soup, domain)
_email_founds.append(email)
return _email_founds if not _email_founds else Utility.flatten_list(
_email_founds)
except Exception, e:
logging.error(str(e))
return _email_founds if not _email_founds else Utility.flatten_list(
_email_founds)
def sort_email(self, emails, domain):
# If this is not governor's domain, do not get any email candidate with .go.id domain name
if '.go.id' not in domain:
emails = [email for email in emails if '.go.id' not in emails]
domain_name = Utility.find_domain_name(domain)
emails = map(lambda email: (email, domain_name), emails)
# Sort based on score descending
emails.sort(cmp=lambda a, b: -1
if self.email_scoring(a) > self.email_scoring(b) else 0)
emails = [x for x, y in emails]
return emails[:cfg.max_email]
@staticmethod
def email_scoring(email_payload):
def DiffText(self: Any, source: Dict[str, Any]) -> None:
"""Diff the provided text data source."""
filename: str = source["filename"]
url: str = source["url"]
allowRevert: bool = source.get("allowRevert", True)
older: Dict[str, Any] = source["older"]
old: Dict[str, Any] = source["old"]
new: Dict[str, Any] = source["new"]
if allowRevert is False:
older["hash"] = Utility.MD5(self, older["raw"])
old["hash"] = Utility.MD5(self, old["raw"])
new["hash"] = Utility.MD5(self, new["raw"])
if old["hash"] == new["hash"]:
logger.info(f"No difference found in {filename} ({url})")
return
elif (allowRevert is False) and (older["hash"] == new["hash"]):
logger.info(f"Ignored revert found in {filename} ({url})")
return
diff: Iterator[str] = Differ().compare(
old["raw"].splitlines(), new["raw"].splitlines()
)
desc: str = ""
additions: int = 0
deletions: int = 0
for line in diff:
if line.startswith("+ "):
additions += 1
desc += f"{line}\n"
elif line.startswith("- "):
deletions += 1
desc += f"{line}\n"
desc = Utility.Truncate(self, desc, 4048, split="\n")
source["urlTrim"] = Utility.Truncate(self, url, 256)
success: bool = SitRep.Notify(
self,
{
"title": source["urlTrim"],
"description": f"```diff\n{desc}```",
"url": url,
"filename": source["filename"],
"additions": f"{additions:,}",
"deletions": f"{deletions:,}",
"diffUrl": source["old"]["gist"].html_url + "/revisions",
},
)
# Ensure no changes go without notification
if success is True:
Utility.UpdateGist(self, source)
def _is_contain_domain(self, domain, email):
email_domain = Utility.find_email_domain(email)
return email_domain in domain if email_domain else False
def train_stage1(self):
"""
In this stage, we will freeze all the convolution blocks and train
only the newly added dense layers. We will add a global spatial average
pooling layer, we will add fully connected dense layers on the output
of the base models. We will freeze the convolution base and train only
the top layers. We will set all the convolution layers to false, the model
should be compiled when all the convolution layers are set to false.
Arguments:
-input_params : This parameter will contain all the information that the user will
input through the terminal
"""
print(
"\nTraining the model by freezing the convolution block and tuning the top layers..."
)
st = dt.now()
utils_obj = Utility(self.input_params, self.path_dict)
#Put if statement here. If model_name != custom then run this block, or else. Do something else.
if (self.input_params['model_name'] != 'custom'):
base_model = utils_obj.load_imagenet_model()
#Adding a global spatial average pooling layer
x = base_model.output
x = GlobalAveragePooling2D()(x)
#Adding a fully-connected dense layer
#x = Dense(self.input_params['dense_neurons'], activation='relu', kernel_initializer='he_normal')(x)
#Adding the custom layers
customlayers = self.input_params['customlayers']
#Adding a final dense output final layer
x = customlayers(x)
n = utils_obj.no_of_classes()
output_layer = Dense(
n,
activation=self.input_params['outputlayer_activation'],
kernel_initializer='glorot_uniform')(x)
model_stg1 = Model(inputs=base_model.input, outputs=output_layer)
#Define the model
model_stg1 = Model(inputs=base_model.input, outputs=output_layer)
#Here we will freeze the convolution base and train only the top layers
#We will set all the convolution layers to false, the model should be
#compiled when all the convolution layers are set to false
for layer in base_model.layers:
layer.trainable = False
else:
model_stg1 = self.input_params['custom_model']
#Compiling the model
model_stg1.compile(
optimizer=optimizers.Adam(lr=self.input_params['stage1_lr']),
loss='categorical_crossentropy',
metrics=[self.input_params['metric']])
#Normalize the images
train_datagen = ImageDataGenerator(
preprocessing_function=utils_obj.init_preprocess_func())
val_datagen = ImageDataGenerator(
preprocessing_function=utils_obj.init_preprocess_func())
df_train = utils_obj.load_data("train")
df_val = utils_obj.load_data("val")
train_generator = train_datagen.flow_from_dataframe(
dataframe=df_train,
directory=self.path_dict['source'],
target_size=utils_obj.init_sizes(),
x_col="filenames",
y_col="class_label",
batch_size=self.input_params['batch_size'],
class_mode='categorical',
color_mode='rgb',
shuffle=True)
val_generator = val_datagen.flow_from_dataframe(
dataframe=df_val,
directory=self.path_dict['source'],
target_size=utils_obj.init_sizes(),
x_col="filenames",
y_col="class_label",
batch_size=self.input_params['batch_size'],
class_mode='categorical',
color_mode='rgb',
shuffle=True)
nb_train_samples = len(train_generator.classes)
nb_val_samples = len(val_generator.classes)
history = model_stg1.fit_generator(
generator=train_generator,
steps_per_epoch=nb_train_samples //
self.input_params['batch_size'],
epochs=self.input_params['epochs1'],
validation_data=val_generator,
validation_steps=nb_val_samples // self.input_params['batch_size'],
callbacks=TrainingUtils.callbacks_list(self, 1),
workers=self.input_params['nworkers'],
use_multiprocessing=False,
max_queue_size=20) #1 for stage 1
hist_df = pd.DataFrame(history.history)
hist_csv_file = self.path_dict['model_path'] + "stage{}/".format(
1) + "{}_history_stage_{}.csv".format(
self.input_params['model_name'], 1)
with open(hist_csv_file, mode='w') as file:
hist_df.to_csv(file, index=None)
#model_stg1.load_weights(self.path_dict['model_path'] + "stage{}/".format(1) + "{}_weights_stage_{}.hdf5".format(self.input_params['model_name'], 1))
model_stg1.save(
self.path_dict['model_path'] + "stage{}/".format(1) +
"{}_model_stage_{}.h5".format(self.input_params['model_name'], 1))
TrainingUtils.save_summary(self, model_stg1, 1)
TrainingUtils.plot_layer_arch(self, model_stg1, 1)
stage1_params = dict()
stage1_params['train_generator'] = train_generator
stage1_params['val_generator'] = val_generator
stage1_params['nb_train_samples'] = nb_train_samples
stage1_params['nb_val_samples'] = nb_val_samples
print("\nTime taken to train the model in stage 1: ", dt.now() - st)
#Start model evaluation for Stage 1
eval_utils = EvalUtils(self.input_params, self.path_dict, 1)
eval_utils.predict_on_test()
return model_stg1, stage1_params
indent thrice
* Bullet point 1
* Bullet point 2
* Bullet point 3
1. item 1
2. item 2
3. item 3
1.item 3-1
"""
doc.set_section_text(text=text_1)
doc.create_section(2, 'Section 1.1')
text_2 = """
This text is centred
test 12345
'''test 6789'''
"""
doc.set_section_text(2, text_2, True)
doc.create_section(1, 'Section 2')
doc.delete_section(3)
# WRITE FILES
util = Utility()
doc_txt = doc.__str__()
doc_xml = util.convert_to_xml(doc.get_wiki())
util.write_file(contents=doc_txt)
util.write_file(contents=doc_xml, file_type='xml', xsd_schema='wiki')
print('SCRIPT COMPLETED')
