def relevant_folders(path, algo, family, matrix_type, matrix_shape, mode):
"""
Finds the right folder to read the data based on given parameters
path: String
Location of data-gen and training folders
algo: String
Current algorithm being processed by this function
family: String
Current family being processed by this function
matrix_type: List
Type of matrix to generate dense, sparse, all
matrix_shape: List
Dimensions of the input matrix with rows and columns
mode: String
Based on mode and arguments we read the specific folders e.g data-gen folder or train folder
return: List
List of folder locations to read data from
"""
folders = []
for current_matrix_type in matrix_type:
for current_matrix_shape in matrix_shape:
if path.startswith('hdfs'):
if mode == 'data-gen':
sub_folder_name = '.'.join([family, current_matrix_type, current_matrix_shape])
cmd = ['hdfs', 'dfs', '-ls', path]
path_subdir = subprocess_exec(' '.join(cmd), extract='dir')
if mode == 'train':
sub_folder_name = '.'.join([algo, family, current_matrix_type, current_matrix_shape])
cmd = ['hdfs', 'dfs', '-ls', path]
path_subdir = subprocess_exec(' '.join(cmd), extract='dir')
path_folders = list(filter(lambda x: contains_dir(x, sub_folder_name), path_subdir))
else:
if mode == 'data-gen':
data_gen_path = join(path, family)
sub_folder_name = '.'.join([current_matrix_type, current_matrix_shape])
path_subdir = glob.glob(data_gen_path + '.' + sub_folder_name + "*")
if mode == 'train':
train_path = join(path, algo)
sub_folder_name = '.'.join([family, current_matrix_type, current_matrix_shape])
path_subdir = glob.glob(train_path + '.' + sub_folder_name + "*")
path_folders = list(filter(lambda x: os.path.isdir(x), path_subdir))
folders.append(path_folders)
folders_flat = reduce(lambda x, y: x + y, folders)
return folders_flat
def get_default_dir(temp_dir, exec_mode, config_dir):
"""
temp_dir: String
exec_mode: String
config_dir: String
return: String
Local or HDFS home directory
"""
if exec_mode == 'singlenode':
if temp_dir is None:
return config_dir
if temp_dir is not None:
return temp_dir
if exec_mode == 'hybrid_spark':
cmd = ['hdfs', 'getconf', '-confKey', 'fs.default.name']
hdfs_base = subprocess_exec(' '.join(cmd), extract='hdfs_base')
if temp_dir is None:
hdfs_home = join(hdfs_base, 'user', getpass.getuser())
check_hdfs_path(hdfs_home)
return hdfs_home
if temp_dir is not None:
if temp_dir.startswith('hdfs'):
return temp_dir
else:
hdfs_home = join(hdfs_base, 'user', getpass.getuser(),
temp_dir)
return hdfs_home
def exec_dml_and_parse_time(exec_type,
dml_file_name,
args,
backend_args_dict,
systemml_args_dict,
log_file_name=None):
"""
This function is responsible of execution of input arguments via python sub process,
We also extract time obtained from the output of this subprocess
exec_type: String
Contains the execution type singlenode / hybrid_spark
dml_file_name: String
DML file name to be used while processing the arguments give
args: Dictionary
Key values pairs depending on the arg type
backend_args_dict: Dictionary
Spark configuration arguments / singlenode config arguments
systemml_args_dict: Dictionary
Supplementary arguments required by the script
log_file_name: String
Path to write the logfile
return: String
The value of time parsed from the logs / error
"""
algorithm = dml_file_name + '.dml'
sup_args = ''.join(
['{} {}'.format(k, v) for k, v in systemml_args_dict.items()])
if exec_type == 'singlenode':
exec_script = join(os.environ.get('SYSTEMML_HOME'), 'bin',
'systemml-standalone.py')
singlenode_pre_args = ''.join(
[' {} {} '.format(k, v) for k, v in backend_args_dict.items()])
args = ''.join(['{} {}'.format(k, v) for k, v in args.items()])
cmd = [
exec_script, singlenode_pre_args, '-f', algorithm, args, sup_args
]
cmd_string = ' '.join(cmd)
if exec_type == 'hybrid_spark':
exec_script = join(os.environ.get('SYSTEMML_HOME'), 'bin',
'systemml-spark-submit.py')
spark_pre_args = ''.join(
[' {} {} '.format(k, v) for k, v in backend_args_dict.items()])
args = ''.join(['{} {}'.format(k, v) for k, v in args.items()])
cmd = [exec_script, spark_pre_args, '-f', algorithm, args, sup_args]
cmd_string = ' '.join(cmd)
time = subprocess_exec(cmd_string, log_file_name, 'time')
return time
def check_hdfs_path(path):
"""
Check if a path is present in HDFS
"""
cmd = ['hdfs', 'dfs', '-test', '-e', path]
return_code = subprocess_exec(' '.join(cmd))
if return_code != 0:
return sys.exit('Please create {}'.format(path))
def check_hdfs_path(path):
"""
Check if a path is present in HDFS
"""
cmd = ['hdfs', 'dfs', '-test', '-e', path]
return_code = subprocess_exec(' '.join(cmd))
if return_code != 0:
return sys.exit('Please create {}'.format(path))
def write_success(time, path):
"""
Write SUCCESS file in the given directory
time: String
Time taken to execute the dml script
path: String
Location to write the SUCCESS file
"""
if 'data-gen' in path:
if path.startswith('hdfs') and len(time.split('.')) == 2:
full_path = join(path, '_SUCCESS')
cmd = ['hdfs', 'dfs', '-touchz', full_path]
subprocess_exec(' '.join(cmd))
else:
if len(time.split('.')) == 2:
full_path = join(path, '_SUCCESS')
open(full_path, 'w').close()
def write_success(time, path):
"""
Write SUCCESS file in the given directory
time: String
Time taken to execute the dml script
path: String
Location to write the SUCCESS file
"""
if 'data-gen' in path:
if path.startswith('hdfs') and len(time.split('.')) == 2:
full_path = join(path, '_SUCCESS')
cmd = ['hdfs', 'dfs', '-touchz', full_path]
subprocess_exec(' '.join(cmd))
else:
if len(time.split('.')) == 2:
full_path = join(path, '_SUCCESS')
open(full_path, 'w').close()
