def __init__(self, module_manager):
SimpleVTKClassModuleBase.__init__(
self, module_manager,
vtk.vtkImageConvolve(), 'Processing.',
('vtkImageData',), ('vtkImageData',),
replaceDoc=True,
inputFunctions=None, outputFunctions=None)
def __init__(self, module_manager):
SimpleVTKClassModuleBase.__init__(self,
module_manager,
vtk.vtkImageConvolve(),
'Processing.', ('vtkImageData', ),
('vtkImageData', ),
replaceDoc=True,
inputFunctions=None,
outputFunctions=None)
def ApplyConvolution(self, imagedata, update_progress = None):
number_filters = len(self.config['convolutionFilters'])
if number_filters:
if not(update_progress):
update_progress = vtk_utils.ShowProgress(number_filters)
for filter in self.config['convolutionFilters']:
convolve = vtk.vtkImageConvolve()
convolve.SetInput(imagedata)
convolve.SetKernel5x5([i/60.0 for i in Kernels[filter]])
convolve.AddObserver("ProgressEvent", lambda obj,evt:
update_progress(convolve, "Rendering..."))
imagedata = convolve.GetOutput()
#convolve.GetOutput().ReleaseDataFlagOn()
return imagedata
def ApplyConvolution(self, imagedata, update_progress = None):
number_filters = len(self.config['convolutionFilters'])
if number_filters:
if not(update_progress):
update_progress = vtk_utils.ShowProgress(number_filters)
for filter in self.config['convolutionFilters']:
convolve = vtk.vtkImageConvolve()
convolve.SetInputData(imagedata)
convolve.SetKernel5x5([i/60.0 for i in Kernels[filter]])
# convolve.ReleaseDataFlagOn()
convolve_ref = weakref.ref(convolve)
convolve_ref().AddObserver("ProgressEvent", lambda obj,evt:
update_progress(convolve_ref(), "Rendering..."))
convolve.Update()
del imagedata
imagedata = convolve.GetOutput()
del convolve
#convolve.GetOutput().ReleaseDataFlagOn()
return imagedata
#!/usr/bin/env python
import vtk
from vtk.test import Testing
from vtk.util.misc import vtkGetDataRoot
VTK_DATA_ROOT = vtkGetDataRoot()
# Show the constant kernel. Smooth an impulse function.
s1 = vtk.vtkImageCanvasSource2D()
s1.SetScalarTypeToFloat()
s1.SetExtent(0, 255, 0, 255, 0, 0)
s1.SetDrawColor(0)
s1.FillBox(0, 255, 0, 255)
s1.SetDrawColor(1.0)
s1.FillBox(75, 175, 75, 175)
convolve = vtk.vtkImageConvolve()
convolve.SetInputConnection(s1.GetOutputPort())
convolve.SetKernel5x5([
1, 1, 1, 1, 1, 5, 4, 3, 2, 1, 5, 4, 3, 2, 1, 5, 4, 3, 2, 1, 1, 1, 1, 1, 1
])
viewer = vtk.vtkImageViewer()
viewer.SetInputConnection(convolve.GetOutputPort())
viewer.SetColorWindow(18)
viewer.SetColorLevel(9)
viewer.Render()
# --- end of script --
def VTKConvolve(im,numret=0,k=5,clip=1,x=1,y=1,wrap=0,mirror=1,constant=None,
kernel=None):
if type(im) == np.ndarray: i = NumToVTKImage(im)
else: i = im
d = i.GetDimensions()
e = i.GetExtent()
dtest = np.sort(d)
if sum(dtest[:2]) == 2: onedim=1
else: onedim = 0
if (d[0] == 1): oned = 1
elif (d[1] == 1): oned = 2
else: oned = 0
if x and not y: oned = 2
if y and not x: oned = 1
if onedim: oned = 1
if constant is not None:
ip = vtk.vtkImageConstantPad()
if d[0] > 1: x0,x1=-k,d[0]+k-1
else: x0,x1=0,0
if d[1] > 1: y0,y1=-k,d[1]+k-1
else: y0,y1=0,0
ip.SetOutputWholeExtent(x0,x1,y0,y1,0,0)
ip.SetConstant(constant)
ip.SetInputData(i)
i = ip.GetOutput()
ip.Update()
elif mirror:
ip = vtk.vtkImageMirrorPad()
if d[0] > 1: x0,x1=-k,d[0]+k-1
else: x0,x1=0,0
if d[1] > 1: y0,y1=-k,d[1]+k-1
else: y0,y1=0,0
ip.SetOutputWholeExtent(x0,x1,y0,y1,0,0)
ip.SetInputData(i)
i = ip.GetOutput()
ip.Update()
elif wrap:
ip = vtk.vtkImageWrapPad()
if d[0] > 1: x0,x1=-k,d[0]+k-1
else: x0,x1=0,0
if d[1] > 1: y0,y1=-k,d[1]+k-1
else: y0,y1=0,0
ip.SetOutputWholeExtent(x0,x1,y0,y1,0,0)
ip.SetInputData(i)
i = ip.GetOutput()
ip.Update()
c = vtk.vtkImageConvolve()
if kernel is None:
if k == 3: k1 = np.asarray([0.25,0.5,0.25])
elif k == 5: k1 = np.asarray([0.0625,0.25,0.375,0.25,0.0625])
if onedim: ke = np.ones((k,k),np.float64) * k1
elif not oned: ke = k1[::,np.newaxis]*k1[np.newaxis,::]
elif oned == 1: ke = np.zeros((k,k),np.float64); ke[::,2] = k1
elif oned == 2: ke = np.zeros((k,k),np.float64); ke[2] = k1
ke = np.ravel(ke)
ke = ke / np.sum(ke)
if onedim: ke = len(k1)*ke
else:
k = kernel.shape[0]
ke = np.ravel(kernel)
if k == 3: c.SetKernel3x3(ke)
if k == 5: c.SetKernel5x5(ke)
if k == 7: c.SetKernel7x7(ke)
c.SetInputData(i)
o = c.GetOutput()
c.Update()
if clip:
ic = vtk.vtkImageClip()
notx = -(not x) * 0
noty = -(not y) * 0
ic.SetOutputWholeExtent(notx,d[0]-1+notx,noty,d[1]-1+noty,0,0)
ic.SetInputData(o)
ic.ClipDataOn()
o = ic.GetOutput()
ic.Update()
if numret: return VTKImageToNum(o)
else: return o
#!/usr/bin/env python import vtk from vtk.test import Testing from vtk.util.misc import vtkGetDataRoot VTK_DATA_ROOT = vtkGetDataRoot() # Show the constant kernel. Smooth an impulse function. s1 = vtk.vtkImageCanvasSource2D() s1.SetScalarTypeToFloat() s1.SetExtent(0,255,0,255,0,0) s1.SetDrawColor(0) s1.FillBox(0,255,0,255) s1.SetDrawColor(1.0) s1.FillBox(75,175,75,175) convolve = vtk.vtkImageConvolve() convolve.SetInputConnection(s1.GetOutputPort()) convolve.SetKernel5x5([1,1,1,1,1,5,4,3,2,1,5,4,3,2,1,5,4,3,2,1,1,1,1,1,1]) viewer = vtk.vtkImageViewer() viewer.SetInputConnection(convolve.GetOutputPort()) viewer.SetColorWindow(18) viewer.SetColorLevel(9) viewer.Render() # --- end of script --