def __init__(self, module_manager):
SimpleVTKClassModuleBase.__init__(
self, module_manager,
vtk.vtkStreamTracer(), 'Processing.',
('vtkDataObject', 'vtkDataSet'), ('vtkPolyData',),
replaceDoc=True,
inputFunctions=None, outputFunctions=None)
def __init__(self, module_manager):
ModuleBase.__init__(self, module_manager)
InputArrayChoiceMixin.__init__(self)
# 0 = RK2
# 1 = RK4
# 2 = RK45
self._config.integrator = INTEG_TYPE.index('RK2')
self._config.max_prop = 5.0
self._config.integration_direction = INTEG_DIR.index('FORWARD')
configList = [
('Vectors selection:', 'vectorsSelection', 'base:str', 'choice',
'The attribute that will be used as vectors for the warping.',
(input_array_choice_mixin.DEFAULT_SELECTION_STRING, )),
('Max propagation:', 'max_prop', 'base:float', 'text',
'The streamline will propagate up to this lenth.'),
('Integration direction:', 'integration_direction', 'base:int',
'choice', 'Select an integration direction.', INTEG_DIR_TEXTS),
('Integrator type:', 'integrator', 'base:int', 'choice',
'Select an integrator for the streamlines.', INTEG_TYPE_TEXTS)
]
self._streamTracer = vtk.vtkStreamTracer()
ScriptedConfigModuleMixin.__init__(
self, configList, {
'Module (self)': self,
'vtkStreamTracer': self._streamTracer
})
module_utils.setup_vtk_object_progress(self, self._streamTracer,
'Tracing stream lines.')
self.sync_module_logic_with_config()
def __init__(self, module_manager):
SimpleVTKClassModuleBase.__init__(self,
module_manager,
vtk.vtkStreamTracer(),
'Processing.',
('vtkDataObject', 'vtkDataSet'),
('vtkPolyData', ),
replaceDoc=True,
inputFunctions=None,
outputFunctions=None)
def _generate_vtk_err():
"""Simple operation which generates a VTK error."""
x, y, z = np.meshgrid(np.arange(-10, 10, 0.5), np.arange(-10, 10, 0.5),
np.arange(-10, 10, 0.5))
mesh = pyvista.StructuredGrid(x, y, z)
x2, y2, z2 = np.meshgrid(np.arange(-1, 1, 0.5), np.arange(-1, 1, 0.5),
np.arange(-1, 1, 0.5))
mesh2 = pyvista.StructuredGrid(x2, y2, z2)
alg = vtk.vtkStreamTracer()
obs = pyvista.Observer()
obs.observe(alg)
alg.SetInputDataObject(mesh)
alg.SetSourceData(mesh2)
alg.Update()
def __init__(self, data_directory):
self.color_range = [0, 1]
bike_filename = os.path.join(data_directory, "bike.vtp")
tunnel_filename = os.path.join(data_directory, "tunnel.vtu")
# Seeds settings
self.resolution = 10
self.point1 = [-0.4, 0, 0.05]
self.point2 = [-0.4, 0, 1.5]
# VTK Pipeline setup
bikeReader = vtk.vtkXMLPolyDataReader()
bikeReader.SetFileName(bike_filename)
bikeReader.Update()
self.bike_mesh = to_mesh_state(bikeReader.GetOutput())
tunnelReader = vtk.vtkXMLUnstructuredGridReader()
tunnelReader.SetFileName(tunnel_filename)
tunnelReader.Update()
self.lineSeed = vtk.vtkLineSource()
self.lineSeed.SetPoint1(*self.point1)
self.lineSeed.SetPoint2(*self.point2)
self.lineSeed.SetResolution(self.resolution)
streamTracer = vtk.vtkStreamTracer()
streamTracer.SetInputConnection(tunnelReader.GetOutputPort())
streamTracer.SetSourceConnection(self.lineSeed.GetOutputPort())
streamTracer.SetIntegrationDirectionToForward()
streamTracer.SetIntegratorTypeToRungeKutta45()
streamTracer.SetMaximumPropagation(3)
streamTracer.SetIntegrationStepUnit(2)
streamTracer.SetInitialIntegrationStep(0.2)
streamTracer.SetMinimumIntegrationStep(0.01)
streamTracer.SetMaximumIntegrationStep(0.5)
streamTracer.SetMaximumError(0.000001)
streamTracer.SetMaximumNumberOfSteps(2000)
streamTracer.SetTerminalSpeed(0.00000000001)
self.tubeFilter = vtk.vtkTubeFilter()
self.tubeFilter.SetInputConnection(streamTracer.GetOutputPort())
self.tubeFilter.SetRadius(0.01)
self.tubeFilter.SetNumberOfSides(6)
self.tubeFilter.CappingOn()
self.tubeFilter.Update()
def getStreamer(vtkReader,
array='B',
x0=None,
maxSteps=50000,
error_tol=1e-8,
direct='f'):
if direct == 'f':
direction = 0
elif direct == 'b':
direction = 1
else:
print(
"Unknown Direction Specified. Please use 'f' for forward (norther hemisphere) "
"and 'b' for backward (southern hemisphere)")
assert False
# print ("X0: {}".format(x0))
# There seems to be a problem with the interpolator getting some point exactly on the x axis.
# This small oscillation seems to fix the issue.
x0 += [0, 1e-12, -1e-12]
output = vtkReader.GetOutput()
b_field = output.GetPointData().GetArray(array)
output.GetPointData().SetVectors(b_field)
rk45 = vtk.vtkRungeKutta45()
streamer = vtk.vtkStreamTracer()
streamer.SetInputConnection(vtkReader.GetOutputPort())
streamer.SetInputData(output)
streamer.SetStartPosition(x0)
streamer.SetMaximumPropagation(maxSteps)
streamer.SetIntegrationStepUnit(2)
streamer.SetMinimumIntegrationStep(0.01)
streamer.SetMaximumIntegrationStep(2.0)
streamer.SetInitialIntegrationStep(0.5)
streamer.SetIntegrationDirection(direction)
streamer.SetIntegrator(rk45)
streamer.SetMaximumError(error_tol / 10)
streamer.Update()
# print("Streamer Complete")
return streamer
def make_stream_actors(position, color):
"""Create a stream and use two mappers. One to represent velocity with
the default colour, and the other to change the colour.
"""
seed = vtk.vtkPointSource()
seed.SetRadius(15)
seed.SetNumberOfPoints(100)
seed.SetCenter(*position)
stream_tracer = vtk.vtkStreamTracer()
stream_tracer.SetInputConnection(mixer.GetOutputPort())
stream_tracer.SetMaximumPropagation(500)
stream_tracer.SetIntegrator(vtk.vtkRungeKutta45())
stream_tracer.SetIntegrationDirectionToBoth()
stream_tracer.SetTerminalSpeed(0.0001)
stream_tracer.SetSource(seed.GetOutput())
stream_tube = vtk.vtkTubeFilter()
stream_tube.SetInputConnection(stream_tracer.GetOutputPort())
stream_tube.SetRadius(.2)
stream_tube.SetNumberOfSides(12)
# Solid transparent colour
stream_mapper1 = vtk.vtkPolyDataMapper()
stream_mapper1.SetInputConnection(stream_tube.GetOutputPort())
stream_mapper1.ScalarVisibilityOff()
stream_actor1 = vtk.vtkActor()
stream_actor1.GetProperty().SetColor(*color)
stream_actor1.SetMapper(stream_mapper1)
stream_actor1.GetProperty().SetOpacity(0.4)
# opaque velocity colour
stream_mapper2 = vtk.vtkPolyDataMapper()
stream_mapper2.SetInputConnection(stream_tube.GetOutputPort())
stream_actor2 = vtk.vtkActor()
stream_actor2.SetMapper(stream_mapper2)
stream_actor2.GetProperty().SetOpacity(1.)
return [stream_actor1, stream_actor2]
def __vtkStreamTracer__(GetOutputPort):
sphereSource = vtk.vtkSphereSource()
sphereSource.SetCenter(0.0, 0.0, 0.0)
sphereSource.SetRadius(0.1)
sphereSource.SetThetaResolution(10)
sphereSource.SetPhiResolution(10)
sphereSource.Update()
LineSourceWidget0 = vtk.vtkLineSource()
LineSourceWidget0.SetPoint1(0.0, 0.0, 1e-3)
LineSourceWidget0.SetPoint2(0.0, 0.0, -1e-3)
LineSourceWidget0.SetResolution(100)
Stream = vtk.vtkStreamTracer()
Stream.SetInput(LineSourceWidget0.GetOutput())
Stream.SetInputConnection(GetOutputPort)
Stream.SetStartPosition(0.0, 0.0, 0.0)
#Stream.SetMaximumPropagation 500
Stream.SetIntegrationDirectionToBoth()
Stream.SetIntegratorTypeToRungeKutta4()
Stream.SetComputeVorticity(False)
return Stream
def __init__(self, module_manager):
ModuleBase.__init__(self, module_manager)
InputArrayChoiceMixin.__init__(self)
# 0 = RK2
# 1 = RK4
# 2 = RK45
self._config.integrator = INTEG_TYPE.index('RK2')
self._config.max_prop = 5.0
self._config.integration_direction = INTEG_DIR.index(
'FORWARD')
configList = [
('Vectors selection:', 'vectorsSelection', 'base:str', 'choice',
'The attribute that will be used as vectors for the warping.',
(input_array_choice_mixin.DEFAULT_SELECTION_STRING,)),
('Max propagation:', 'max_prop', 'base:float', 'text',
'The streamline will propagate up to this lenth.'),
('Integration direction:', 'integration_direction', 'base:int', 'choice',
'Select an integration direction.',
INTEG_DIR_TEXTS),
('Integrator type:', 'integrator', 'base:int', 'choice',
'Select an integrator for the streamlines.',
INTEG_TYPE_TEXTS)]
self._streamTracer = vtk.vtkStreamTracer()
ScriptedConfigModuleMixin.__init__(
self, configList,
{'Module (self)' : self,
'vtkStreamTracer' : self._streamTracer})
module_utils.setup_vtk_object_progress(self, self._streamTracer,
'Tracing stream lines.')
self.sync_module_logic_with_config()
def main():
xyzFilename, qFilename = get_program_parameters()
colors = vtk.vtkNamedColors()
aren = vtk.vtkRenderer()
renWin = vtk.vtkRenderWindow()
renWin.AddRenderer(aren)
iren = vtk.vtkRenderWindowInteractor()
iren.SetRenderWindow(renWin)
scalarRange = [0.0] * 2
c = [0.0] * 3
maxTime = 0.0
reader = vtk.vtkMultiBlockPLOT3DReader()
reader.SetXYZFileName(xyzFilename)
reader.SetQFileName(qFilename)
reader.Update() # Force a read to occur.
pd = reader.GetOutput().GetBlock(0)
pd.GetCenter(c)
if pd.GetPointData().GetScalars():
pd.GetPointData().GetScalars().GetRange(scalarRange)
if pd.GetPointData().GetVectors():
maxVelocity = pd.GetPointData().GetVectors().GetMaxNorm()
maxTime = 20.0 * pd.GetLength() / maxVelocity
outlineF = vtk.vtkStructuredGridOutlineFilter()
outlineF.SetInputData(pd)
outlineMapper = vtk.vtkPolyDataMapper()
outlineMapper.SetInputConnection(outlineF.GetOutputPort())
outline = vtk.vtkActor()
outline.SetMapper(outlineMapper)
outline.GetProperty().SetColor(colors.GetColor3d('Moccasin'))
outline.GetProperty().SetLineWidth(2.0)
#
# Some geometry for context
#
wall = vtk.vtkStructuredGridGeometryFilter()
wall.SetInputData(pd)
wall.SetExtent(0, 100, 0, 100, 0, 0)
wallMap = vtk.vtkPolyDataMapper()
wallMap.SetInputConnection(wall.GetOutputPort())
wallMap.ScalarVisibilityOff()
wallActor = vtk.vtkActor()
wallActor.SetMapper(wallMap)
wallActor.GetProperty().SetColor(colors.GetColor3d('Silver'))
fin = vtk.vtkStructuredGridGeometryFilter()
fin.SetInputData(pd)
fin.SetExtent(0, 100, 0, 0, 0, 100)
finMap = vtk.vtkPolyDataMapper()
finMap.SetInputConnection(fin.GetOutputPort())
finMap.ScalarVisibilityOff()
finActor = vtk.vtkActor()
finActor.SetMapper(finMap)
finActor.GetProperty().SetColor(colors.GetColor3d('Silver'))
#
# regular streamlines
#
line1 = vtk.vtkLineSource()
line1.SetResolution(25)
line1.SetPoint1(-6.36, 0.25, 0.06)
line1.SetPoint2(-6.36, 0.25, 5.37)
rakeMapper = vtk.vtkPolyDataMapper()
rakeMapper.SetInputConnection(line1.GetOutputPort())
rake1 = vtk.vtkActor()
rake1.SetMapper(rakeMapper)
rake1.GetProperty().SetColor(colors.GetColor3d('Black'))
rake1.GetProperty().SetLineWidth(5)
streamers = vtk.vtkStreamTracer()
# streamers.DebugOn()
streamers.SetInputConnection(reader.GetOutputPort())
streamers.SetSourceConnection(line1.GetOutputPort())
streamers.SetMaximumPropagation(maxTime)
streamers.SetInitialIntegrationStep(0.2)
streamers.SetMinimumIntegrationStep(0.01)
streamers.SetIntegratorType(2)
streamers.Update()
streamersMapper = vtk.vtkPolyDataMapper()
streamersMapper.SetInputConnection(streamers.GetOutputPort())
streamersMapper.SetScalarRange(scalarRange)
lines = vtk.vtkActor()
lines.SetMapper(streamersMapper)
aren.AddActor(outline)
aren.AddActor(wallActor)
aren.AddActor(finActor)
aren.AddActor(rake1)
aren.AddActor(lines)
aren.SetBackground(colors.GetColor3d('Gray'))
aren.ResetCamera()
aren.GetActiveCamera().Elevation(30.0)
aren.GetActiveCamera().Azimuth(30.0)
aren.GetActiveCamera().Dolly(1.2)
aren.ResetCameraClippingRange()
renWin.SetSize(640, 480)
renWin.SetWindowName('BluntStreamlines')
renWin.Render()
# Interact with the data.
iren.Start()
def main():
colors = vtk.vtkNamedColors()
# colors.SetColor('bkg', [0.1, 0.2, 0.4, 1.0])
xyz_file, q_file = get_program_parameters()
# Read the data.
#
pl3d = vtk.vtkMultiBlockPLOT3DReader()
pl3d.SetXYZFileName(xyz_file)
pl3d.SetQFileName(q_file)
pl3d.SetScalarFunctionNumber(100)
pl3d.SetVectorFunctionNumber(202)
pl3d.Update()
seeds = vtk.vtkPlaneSource()
seeds.SetXResolution(4)
seeds.SetYResolution(4)
seeds.SetOrigin(2, -2, 26)
seeds.SetPoint1(2, 2, 26)
seeds.SetPoint2(2, -2, 32)
streamline = vtk.vtkStreamTracer()
streamline.SetInputData(pl3d.GetOutput().GetBlock(0))
streamline.SetSourceConnection(seeds.GetOutputPort())
streamline.SetMaximumPropagation(200)
streamline.SetInitialIntegrationStep(.2)
streamline.SetIntegrationDirectionToForward()
streamline_mapper = vtk.vtkPolyDataMapper()
streamline_mapper.SetInputConnection(streamline.GetOutputPort())
streamline_actor = vtk.vtkActor()
streamline_actor.SetMapper(streamline_mapper)
streamline_actor.VisibilityOn()
outline = vtk.vtkStructuredGridOutlineFilter()
outline.SetInputData(pl3d.GetOutput().GetBlock(0))
outline_mapper = vtk.vtkPolyDataMapper()
outline_mapper.SetInputConnection(outline.GetOutputPort())
outline_actor = vtk.vtkActor()
outline_actor.SetMapper(outline_mapper)
outline_actor.GetProperty().SetColor(colors.GetColor3d('White'))
renderer = vtk.vtkRenderer()
render_window = vtk.vtkRenderWindow()
render_window.AddRenderer(renderer)
render_window.SetWindowName('StreamLines')
interactor = vtk.vtkRenderWindowInteractor()
interactor.SetInteractorStyle(vtk.vtkInteractorStyleTrackballCamera())
render_window.SetInteractor(interactor)
renderer.AddActor(streamline_actor)
renderer.AddActor(outline_actor)
renderer.SetBackground(colors.GetColor3d('MidnightBlue'))
interactor.Initialize()
render_window.Render()
renderer.GetActiveCamera().SetPosition(-32.8, -12.3, 46.3)
renderer.GetActiveCamera().SetFocalPoint(8.3, 0.03, 29.8)
renderer.GetActiveCamera().SetViewUp(0.2, 0.5, 0.9)
render_window.Render()
interactor.Start()
def main():
fileName = get_program_parameters()
colors = vtk.vtkNamedColors()
# Set the furniture colors, matching those in the VTKTextBook.
tableTopColor = [0.59, 0.427, 0.392]
filingCabinetColor = [0.8, 0.8, 0.6]
bookShelfColor = [0.8, 0.8, 0.6]
windowColor = [0.3, 0.3, 0.5]
colors.SetColor('TableTop', *tableTopColor)
colors.SetColor('FilingCabinet', *filingCabinetColor)
colors.SetColor('BookShelf', *bookShelfColor)
colors.SetColor('WindowColor', *windowColor)
# We read a data file that represents a CFD analysis of airflow in an office
# (with ventilation and a burning cigarette). We force an update so that we
# can query the output for its length, i.e., the length of the diagonal
# of the bounding box. This is useful for normalizing the data.
reader = vtk.vtkDataSetReader()
reader.SetFileName(fileName)
reader.Update()
# Now we will generate a single streamline in the data. We select the
# integration order to use (RungeKutta order 4) and associate it with
# the streamer. The start position is the position in world space where
# we want to begin streamline integration; and we integrate in both
# directions. The step length is the length of the line segments that
# make up the streamline (i.e., related to display). The
# IntegrationStepLength specifies the integration step length as a
# fraction of the cell size that the streamline is in.
integ = vtk.vtkRungeKutta4()
streamer = vtk.vtkStreamTracer()
streamer.SetInputConnection(reader.GetOutputPort())
streamer.SetStartPosition(0.1, 2.1, 0.5)
streamer.SetMaximumPropagation(500)
streamer.SetInitialIntegrationStep(0.05)
streamer.SetIntegrationDirectionToBoth()
streamer.SetIntegrator(integ)
# The tube is wrapped around the generated streamline. By varying the radius
# by the inverse of vector magnitude, we are creating a tube whose radius is
# proportional to mass flux (in incompressible flow).
streamTube = vtk.vtkTubeFilter()
streamTube.SetInputConnection(streamer.GetOutputPort())
streamTube.SetInputArrayToProcess(1, 0, 0,
vtkDataObject.FIELD_ASSOCIATION_POINTS,
'vectors')
streamTube.SetRadius(0.02)
streamTube.SetNumberOfSides(12)
streamTube.SetVaryRadiusToVaryRadiusByVector()
mapStreamTube = vtk.vtkPolyDataMapper()
mapStreamTube.SetInputConnection(streamTube.GetOutputPort())
mapStreamTube.SetScalarRange(
reader.GetOutput().GetPointData().GetScalars().GetRange())
streamTubeActor = vtk.vtkActor()
streamTubeActor.SetMapper(mapStreamTube)
streamTubeActor.GetProperty().BackfaceCullingOn()
# Create the scene.
# We generate a whole bunch of planes which correspond to
# the geometry in the analysis; tables, bookshelves and so on.
table1 = vtk.vtkStructuredGridGeometryFilter()
table1.SetInputData(reader.GetStructuredGridOutput())
table1.SetExtent(11, 15, 7, 9, 8, 8)
mapTable1 = vtk.vtkPolyDataMapper()
mapTable1.SetInputConnection(table1.GetOutputPort())
mapTable1.ScalarVisibilityOff()
table1Actor = vtk.vtkActor()
table1Actor.SetMapper(mapTable1)
table1Actor.GetProperty().SetColor(colors.GetColor3d('TableTop'))
table2 = vtk.vtkStructuredGridGeometryFilter()
table2.SetInputData(reader.GetStructuredGridOutput())
table2.SetExtent(11, 15, 10, 12, 8, 8)
mapTable2 = vtk.vtkPolyDataMapper()
mapTable2.SetInputConnection(table2.GetOutputPort())
mapTable2.ScalarVisibilityOff()
table2Actor = vtk.vtkActor()
table2Actor.SetMapper(mapTable2)
table2Actor.GetProperty().SetColor(colors.GetColor3d('TableTop'))
FilingCabinet1 = vtk.vtkStructuredGridGeometryFilter()
FilingCabinet1.SetInputData(reader.GetStructuredGridOutput())
FilingCabinet1.SetExtent(15, 15, 7, 9, 0, 8)
mapFilingCabinet1 = vtk.vtkPolyDataMapper()
mapFilingCabinet1.SetInputConnection(FilingCabinet1.GetOutputPort())
mapFilingCabinet1.ScalarVisibilityOff()
FilingCabinet1Actor = vtk.vtkActor()
FilingCabinet1Actor.SetMapper(mapFilingCabinet1)
FilingCabinet1Actor.GetProperty().SetColor(
colors.GetColor3d('FilingCabinet'))
FilingCabinet2 = vtk.vtkStructuredGridGeometryFilter()
FilingCabinet2.SetInputData(reader.GetStructuredGridOutput())
FilingCabinet2.SetExtent(15, 15, 10, 12, 0, 8)
mapFilingCabinet2 = vtk.vtkPolyDataMapper()
mapFilingCabinet2.SetInputConnection(FilingCabinet2.GetOutputPort())
mapFilingCabinet2.ScalarVisibilityOff()
FilingCabinet2Actor = vtk.vtkActor()
FilingCabinet2Actor.SetMapper(mapFilingCabinet2)
FilingCabinet2Actor.GetProperty().SetColor(
colors.GetColor3d('FilingCabinet'))
bookshelf1Top = vtk.vtkStructuredGridGeometryFilter()
bookshelf1Top.SetInputData(reader.GetStructuredGridOutput())
bookshelf1Top.SetExtent(13, 13, 0, 4, 0, 11)
mapBookshelf1Top = vtk.vtkPolyDataMapper()
mapBookshelf1Top.SetInputConnection(bookshelf1Top.GetOutputPort())
mapBookshelf1Top.ScalarVisibilityOff()
bookshelf1TopActor = vtk.vtkActor()
bookshelf1TopActor.SetMapper(mapBookshelf1Top)
bookshelf1TopActor.GetProperty().SetColor(colors.GetColor3d('BookShelf'))
bookshelf1Bottom = vtk.vtkStructuredGridGeometryFilter()
bookshelf1Bottom.SetInputData(reader.GetStructuredGridOutput())
bookshelf1Bottom.SetExtent(20, 20, 0, 4, 0, 11)
mapBookshelf1Bottom = vtk.vtkPolyDataMapper()
mapBookshelf1Bottom.SetInputConnection(bookshelf1Bottom.GetOutputPort())
mapBookshelf1Bottom.ScalarVisibilityOff()
bookshelf1BottomActor = vtk.vtkActor()
bookshelf1BottomActor.SetMapper(mapBookshelf1Bottom)
bookshelf1BottomActor.GetProperty().SetColor(
colors.GetColor3d('BookShelf'))
bookshelf1Front = vtk.vtkStructuredGridGeometryFilter()
bookshelf1Front.SetInputData(reader.GetStructuredGridOutput())
bookshelf1Front.SetExtent(13, 20, 0, 0, 0, 11)
mapBookshelf1Front = vtk.vtkPolyDataMapper()
mapBookshelf1Front.SetInputConnection(bookshelf1Front.GetOutputPort())
mapBookshelf1Front.ScalarVisibilityOff()
bookshelf1FrontActor = vtk.vtkActor()
bookshelf1FrontActor.SetMapper(mapBookshelf1Front)
bookshelf1FrontActor.GetProperty().SetColor(colors.GetColor3d('BookShelf'))
bookshelf1Back = vtk.vtkStructuredGridGeometryFilter()
bookshelf1Back.SetInputData(reader.GetStructuredGridOutput())
bookshelf1Back.SetExtent(13, 20, 4, 4, 0, 11)
mapBookshelf1Back = vtk.vtkPolyDataMapper()
mapBookshelf1Back.SetInputConnection(bookshelf1Back.GetOutputPort())
mapBookshelf1Back.ScalarVisibilityOff()
bookshelf1BackActor = vtk.vtkActor()
bookshelf1BackActor.SetMapper(mapBookshelf1Back)
bookshelf1BackActor.GetProperty().SetColor(colors.GetColor3d('BookShelf'))
bookshelf1LHS = vtk.vtkStructuredGridGeometryFilter()
bookshelf1LHS.SetInputData(reader.GetStructuredGridOutput())
bookshelf1LHS.SetExtent(13, 20, 0, 4, 0, 0)
mapBookshelf1LHS = vtk.vtkPolyDataMapper()
mapBookshelf1LHS.SetInputConnection(bookshelf1LHS.GetOutputPort())
mapBookshelf1LHS.ScalarVisibilityOff()
bookshelf1LHSActor = vtk.vtkActor()
bookshelf1LHSActor.SetMapper(mapBookshelf1LHS)
bookshelf1LHSActor.GetProperty().SetColor(colors.GetColor3d('BookShelf'))
bookshelf1RHS = vtk.vtkStructuredGridGeometryFilter()
bookshelf1RHS.SetInputData(reader.GetStructuredGridOutput())
bookshelf1RHS.SetExtent(13, 20, 0, 4, 11, 11)
mapBookshelf1RHS = vtk.vtkPolyDataMapper()
mapBookshelf1RHS.SetInputConnection(bookshelf1RHS.GetOutputPort())
mapBookshelf1RHS.ScalarVisibilityOff()
bookshelf1RHSActor = vtk.vtkActor()
bookshelf1RHSActor.SetMapper(mapBookshelf1RHS)
bookshelf1RHSActor.GetProperty().SetColor(colors.GetColor3d('BookShelf'))
bookshelf2Top = vtk.vtkStructuredGridGeometryFilter()
bookshelf2Top.SetInputData(reader.GetStructuredGridOutput())
bookshelf2Top.SetExtent(13, 13, 15, 19, 0, 11)
mapBookshelf2Top = vtk.vtkPolyDataMapper()
mapBookshelf2Top.SetInputConnection(bookshelf2Top.GetOutputPort())
mapBookshelf2Top.ScalarVisibilityOff()
bookshelf2TopActor = vtk.vtkActor()
bookshelf2TopActor.SetMapper(mapBookshelf2Top)
bookshelf2TopActor.GetProperty().SetColor(colors.GetColor3d('BookShelf'))
bookshelf2Bottom = vtk.vtkStructuredGridGeometryFilter()
bookshelf2Bottom.SetInputData(reader.GetStructuredGridOutput())
bookshelf2Bottom.SetExtent(20, 20, 15, 19, 0, 11)
mapBookshelf2Bottom = vtk.vtkPolyDataMapper()
mapBookshelf2Bottom.SetInputConnection(bookshelf2Bottom.GetOutputPort())
mapBookshelf2Bottom.ScalarVisibilityOff()
bookshelf2BottomActor = vtk.vtkActor()
bookshelf2BottomActor.SetMapper(mapBookshelf2Bottom)
bookshelf2BottomActor.GetProperty().SetColor(
colors.GetColor3d('BookShelf'))
bookshelf2Front = vtk.vtkStructuredGridGeometryFilter()
bookshelf2Front.SetInputData(reader.GetStructuredGridOutput())
bookshelf2Front.SetExtent(13, 20, 15, 15, 0, 11)
mapBookshelf2Front = vtk.vtkPolyDataMapper()
mapBookshelf2Front.SetInputConnection(bookshelf2Front.GetOutputPort())
mapBookshelf2Front.ScalarVisibilityOff()
bookshelf2FrontActor = vtk.vtkActor()
bookshelf2FrontActor.SetMapper(mapBookshelf2Front)
bookshelf2FrontActor.GetProperty().SetColor(colors.GetColor3d('BookShelf'))
bookshelf2Back = vtk.vtkStructuredGridGeometryFilter()
bookshelf2Back.SetInputData(reader.GetStructuredGridOutput())
bookshelf2Back.SetExtent(13, 20, 19, 19, 0, 11)
mapBookshelf2Back = vtk.vtkPolyDataMapper()
mapBookshelf2Back.SetInputConnection(bookshelf2Back.GetOutputPort())
mapBookshelf2Back.ScalarVisibilityOff()
bookshelf2BackActor = vtk.vtkActor()
bookshelf2BackActor.SetMapper(mapBookshelf2Back)
bookshelf2BackActor.GetProperty().SetColor(colors.GetColor3d('BookShelf'))
bookshelf2LHS = vtk.vtkStructuredGridGeometryFilter()
bookshelf2LHS.SetInputData(reader.GetStructuredGridOutput())
bookshelf2LHS.SetExtent(13, 20, 15, 19, 0, 0)
mapBookshelf2LHS = vtk.vtkPolyDataMapper()
mapBookshelf2LHS.SetInputConnection(bookshelf2LHS.GetOutputPort())
mapBookshelf2LHS.ScalarVisibilityOff()
bookshelf2LHSActor = vtk.vtkActor()
bookshelf2LHSActor.SetMapper(mapBookshelf2LHS)
bookshelf2LHSActor.GetProperty().SetColor(colors.GetColor3d('BookShelf'))
bookshelf2RHS = vtk.vtkStructuredGridGeometryFilter()
bookshelf2RHS.SetInputData(reader.GetStructuredGridOutput())
bookshelf2RHS.SetExtent(13, 20, 15, 19, 11, 11)
mapBookshelf2RHS = vtk.vtkPolyDataMapper()
mapBookshelf2RHS.SetInputConnection(bookshelf2RHS.GetOutputPort())
mapBookshelf2RHS.ScalarVisibilityOff()
bookshelf2RHSActor = vtk.vtkActor()
bookshelf2RHSActor.SetMapper(mapBookshelf2RHS)
bookshelf2RHSActor.GetProperty().SetColor(colors.GetColor3d('BookShelf'))
window = vtk.vtkStructuredGridGeometryFilter()
window.SetInputData(reader.GetStructuredGridOutput())
window.SetExtent(20, 20, 6, 13, 10, 13)
mapWindow = vtk.vtkPolyDataMapper()
mapWindow.SetInputConnection(window.GetOutputPort())
mapWindow.ScalarVisibilityOff()
windowActor = vtk.vtkActor()
windowActor.SetMapper(mapWindow)
windowActor.GetProperty().SetColor(colors.GetColor3d('WindowColor'))
outlet = vtk.vtkStructuredGridGeometryFilter()
outlet.SetInputData(reader.GetStructuredGridOutput())
outlet.SetExtent(0, 0, 9, 10, 14, 16)
mapOutlet = vtk.vtkPolyDataMapper()
mapOutlet.SetInputConnection(outlet.GetOutputPort())
mapOutlet.ScalarVisibilityOff()
outletActor = vtk.vtkActor()
outletActor.SetMapper(mapOutlet)
outletActor.GetProperty().SetColor(colors.GetColor3d('lamp_black'))
inlet = vtk.vtkStructuredGridGeometryFilter()
inlet.SetInputData(reader.GetStructuredGridOutput())
inlet.SetExtent(0, 0, 9, 10, 0, 6)
mapInlet = vtk.vtkPolyDataMapper()
mapInlet.SetInputConnection(inlet.GetOutputPort())
mapInlet.ScalarVisibilityOff()
inletActor = vtk.vtkActor()
inletActor.SetMapper(mapInlet)
inletActor.GetProperty().SetColor(colors.GetColor3d('lamp_black'))
outline = vtk.vtkStructuredGridOutlineFilter()
outline.SetInputData(reader.GetStructuredGridOutput())
mapOutline = vtk.vtkPolyDataMapper()
mapOutline.SetInputConnection(outline.GetOutputPort())
outlineActor = vtk.vtkActor()
outlineActor.SetMapper(mapOutline)
outlineActor.GetProperty().SetColor(colors.GetColor3d('Black'))
# Create the rendering window, renderer, and interactive renderer.
ren = vtk.vtkRenderer()
renWin = vtk.vtkRenderWindow()
renWin.AddRenderer(ren)
iren = vtk.vtkRenderWindowInteractor()
iren.SetRenderWindow(renWin)
# Add the remaining actors to the renderer, set the background and size.
ren.AddActor(table1Actor)
ren.AddActor(table2Actor)
ren.AddActor(FilingCabinet1Actor)
ren.AddActor(FilingCabinet2Actor)
ren.AddActor(bookshelf1TopActor)
ren.AddActor(bookshelf1BottomActor)
ren.AddActor(bookshelf1FrontActor)
ren.AddActor(bookshelf1BackActor)
ren.AddActor(bookshelf1LHSActor)
ren.AddActor(bookshelf1RHSActor)
ren.AddActor(bookshelf2TopActor)
ren.AddActor(bookshelf2BottomActor)
ren.AddActor(bookshelf2FrontActor)
ren.AddActor(bookshelf2BackActor)
ren.AddActor(bookshelf2LHSActor)
ren.AddActor(bookshelf2RHSActor)
ren.AddActor(windowActor)
ren.AddActor(outletActor)
ren.AddActor(inletActor)
ren.AddActor(outlineActor)
ren.AddActor(streamTubeActor)
ren.SetBackground(colors.GetColor3d('SlateGray'))
aCamera = vtk.vtkCamera()
aCamera.SetClippingRange(0.726079, 36.3039)
aCamera.SetFocalPoint(2.43584, 2.15046, 1.11104)
aCamera.SetPosition(-4.76183, -10.4426, 3.17203)
aCamera.ComputeViewPlaneNormal()
aCamera.SetViewUp(0.0511273, 0.132773, 0.989827)
aCamera.SetViewAngle(18.604)
aCamera.Zoom(1.2)
ren.SetActiveCamera(aCamera)
renWin.SetSize(640, 400)
renWin.SetWindowName('OfficeTube')
iren.Initialize()
iren.Start()
outline.SetInputData(pl3d_output) outlineMapper = vtk.vtkPolyDataMapper() outlineMapper.SetInputConnection(outline.GetOutputPort()) outlineActor = vtk.vtkActor() outlineActor.SetMapper(outlineMapper) seeds = vtk.vtkLineSource() seeds.SetPoint1(15, -5, 32) seeds.SetPoint2(15, 5, 32) seeds.SetResolution(10) integ = vtk.vtkRungeKutta4() sl = vtk.vtkStreamTracer() sl.SetIntegrator(integ) sl.SetInputData(pl3d_output) sl.SetSourceConnection(seeds.GetOutputPort()) sl.SetMaximumPropagation(100) sl.SetInitialIntegrationStep(0.1) sl.SetIntegrationDirectionToBackward() tube = vtk.vtkTubeFilter() tube.SetInputConnection(sl.GetOutputPort()) tube.SetRadius(0.1) mapper = vtk.vtkPolyDataMapper() mapper.SetInputConnection(tube.GetOutputPort()) actor = vtk.vtkActor()
C = N.array(density.GetOutput().GetPoint(0)) H = N.array(density.GetOutput().GetPoint(1)) seedsC = vtk.vtkPointSource() seedsC.SetRadius(0.05) seedsC.SetCenter(0.9 * C + 0.1 * H) seedsC.SetNumberOfPoints(30) seedsH = vtk.vtkPointSource() seedsH.SetRadius(0.05) seedsH.SetCenter(0.9 * H + 0.1 * C) seedsH.SetNumberOfPoints(30) integ = vtk.vtkRungeKutta4() streamC = vtk.vtkStreamTracer() streamC.SetInputConnection(attrib.GetOutputPort()) streamC.SetSourceConnection(seedsC.GetOutputPort()) streamC.SetMaximumPropagation(500) streamC.SetInitialIntegrationStep(0.05) streamC.SetIntegrationDirectionToBackward() streamC.SetIntegrator(integ) streamCMapper = vtk.vtkPolyDataMapper() streamCMapper.SetInputConnection(streamC.GetOutputPort()) streamCActor = vtk.vtkActor() streamCActor.SetMapper(streamCMapper) streamH = vtk.vtkStreamTracer() streamH.SetInputConnection(attrib.GetOutputPort())
def main():
colors = vtk.vtkNamedColors()
xyxFile, qFile = get_program_parameters()
# Read the data.
#
pl3d = vtk.vtkMultiBlockPLOT3DReader()
pl3d.AutoDetectFormatOn()
pl3d.SetXYZFileName(xyxFile)
pl3d.SetQFileName(qFile)
pl3d.SetScalarFunctionNumber(153)
pl3d.SetVectorFunctionNumber(200)
pl3d.Update()
sg = pl3d.GetOutput().GetBlock(0)
# blue to red lut
#
lut = vtk.vtkLookupTable()
lut.SetHueRange(0.667, 0.0)
# Computational planes.
floorComp = vtk.vtkStructuredGridGeometryFilter()
floorComp.SetExtent(0, 37, 0, 75, 0, 0)
floorComp.SetInputData(sg)
floorComp.Update()
floorMapper = vtk.vtkPolyDataMapper()
floorMapper.SetInputConnection(floorComp.GetOutputPort())
floorMapper.ScalarVisibilityOff()
floorMapper.SetLookupTable(lut)
floorActor = vtk.vtkActor()
floorActor.SetMapper(floorMapper)
floorActor.GetProperty().SetRepresentationToWireframe()
floorActor.GetProperty().SetColor(colors.GetColor3d("Beige"))
floorActor.GetProperty().SetLineWidth(2)
subFloorComp = vtk.vtkStructuredGridGeometryFilter()
subFloorComp.SetExtent(0, 37, 0, 15, 22, 22)
subFloorComp.SetInputData(sg)
subFloorMapper = vtk.vtkPolyDataMapper()
subFloorMapper.SetInputConnection(subFloorComp.GetOutputPort())
subFloorMapper.SetLookupTable(lut)
subFloorMapper.SetScalarRange(sg.GetScalarRange())
subFloorActor = vtk.vtkActor()
subFloorActor.SetMapper(subFloorMapper)
subFloor2Comp = vtk.vtkStructuredGridGeometryFilter()
subFloor2Comp.SetExtent(0, 37, 60, 75, 22, 22)
subFloor2Comp.SetInputData(sg)
subFloor2Mapper = vtk.vtkPolyDataMapper()
subFloor2Mapper.SetInputConnection(subFloor2Comp.GetOutputPort())
subFloor2Mapper.SetLookupTable(lut)
subFloor2Mapper.SetScalarRange(sg.GetScalarRange())
subFloor2Actor = vtk.vtkActor()
subFloor2Actor.SetMapper(subFloor2Mapper)
postComp = vtk.vtkStructuredGridGeometryFilter()
postComp.SetExtent(10, 10, 0, 75, 0, 37)
postComp.SetInputData(sg)
postMapper = vtk.vtkPolyDataMapper()
postMapper.SetInputConnection(postComp.GetOutputPort())
postMapper.SetLookupTable(lut)
postMapper.SetScalarRange(sg.GetScalarRange())
postActor = vtk.vtkActor()
postActor.SetMapper(postMapper)
postActor.GetProperty().SetColor(colors.GetColor3d("Beige"))
fanComp = vtk.vtkStructuredGridGeometryFilter()
fanComp.SetExtent(0, 37, 38, 38, 0, 37)
fanComp.SetInputData(sg)
fanMapper = vtk.vtkPolyDataMapper()
fanMapper.SetInputConnection(fanComp.GetOutputPort())
fanMapper.SetLookupTable(lut)
fanMapper.SetScalarRange(sg.GetScalarRange())
fanActor = vtk.vtkActor()
fanActor.SetMapper(fanMapper)
fanActor.GetProperty().SetColor(colors.GetColor3d("Beige"))
# streamers
#
# spherical seed points
rake = vtk.vtkPointSource()
rake.SetCenter(-0.74, 0, 0.3)
rake.SetNumberOfPoints(10)
# a line of seed points
seedsComp = vtk.vtkStructuredGridGeometryFilter()
seedsComp.SetExtent(10, 10, 37, 39, 1, 35)
seedsComp.SetInputData(sg)
streamers = vtk.vtkStreamTracer()
streamers.SetInputConnection(pl3d.GetOutputPort())
# streamers SetSource [rake GetOutput]
streamers.SetSourceConnection(seedsComp.GetOutputPort())
streamers.SetMaximumPropagation(250)
streamers.SetInitialIntegrationStep(.2)
streamers.SetMinimumIntegrationStep(.01)
streamers.SetIntegratorType(2)
streamers.Update()
tubes = vtk.vtkTubeFilter()
tubes.SetInputConnection(streamers.GetOutputPort())
tubes.SetNumberOfSides(8)
tubes.SetRadius(.08)
tubes.SetVaryRadius(0)
mapTubes = vtk.vtkPolyDataMapper()
mapTubes.SetInputConnection(tubes.GetOutputPort())
mapTubes.SetScalarRange(sg.GetScalarRange())
tubesActor = vtk.vtkActor()
tubesActor.SetMapper(mapTubes)
# outline
outline = vtk.vtkStructuredGridOutlineFilter()
outline.SetInputData(sg)
outlineMapper = vtk.vtkPolyDataMapper()
outlineMapper.SetInputConnection(outline.GetOutputPort())
outlineActor = vtk.vtkActor()
outlineActor.SetMapper(outlineMapper)
outlineActor.GetProperty().SetColor(colors.GetColor3d("Beige"))
# Create graphics stuff.
ren1 = vtk.vtkRenderer()
renWin = vtk.vtkRenderWindow()
renWin.AddRenderer(ren1)
iren = vtk.vtkRenderWindowInteractor()
iren.SetRenderWindow(renWin)
# Add the actors to the renderer, set the background and size.
#
ren1.AddActor(outlineActor)
ren1.AddActor(floorActor)
ren1.AddActor(subFloorActor)
ren1.AddActor(subFloor2Actor)
ren1.AddActor(postActor)
ren1.AddActor(fanActor)
ren1.AddActor(tubesActor)
aCam = vtk.vtkCamera()
aCam.SetFocalPoint(0.00657892, 0, 2.41026)
aCam.SetPosition(-1.94838, -47.1275, 39.4607)
aCam.SetViewUp(0.00653193, 0.617865, 0.786257)
ren1.ResetCamera()
aCam.Dolly(1.)
aCam.SetClippingRange(1, 100)
ren1.SetBackground(colors.GetColor3d("SlateGray"))
ren1.SetActiveCamera(aCam)
renWin.SetSize(640, 480)
renWin.Render()
iren.Start()
def main():
fileName = get_program_parameters()
colors = vtk.vtkNamedColors()
# Set the furniture colors.
colors.SetColor("Furniture", [204, 204, 153, 255])
scalarRange = [0.0, 0.0]
maxTime = 0
aren = vtk.vtkRenderer()
renWin = vtk.vtkRenderWindow()
renWin.AddRenderer(aren)
iren = vtk.vtkRenderWindowInteractor()
iren.SetRenderWindow(renWin)
#
# Read the data.
#
reader = vtk.vtkStructuredGridReader()
reader.SetFileName(fileName)
reader.Update() # Force a read to occur.
reader.GetOutput().GetLength()
if reader.GetOutput().GetPointData().GetScalars():
reader.GetOutput().GetPointData().GetScalars().GetRange(scalarRange)
if reader.GetOutput().GetPointData().GetVectors():
maxVelocity = reader.GetOutput().GetPointData().GetVectors(
).GetMaxNorm()
maxTime = 4.0 * reader.GetOutput().GetLength() / maxVelocity
#
# Outline around the data.
#
outlineF = vtk.vtkStructuredGridOutlineFilter()
outlineF.SetInputConnection(reader.GetOutputPort())
outlineMapper = vtk.vtkPolyDataMapper()
outlineMapper.SetInputConnection(outlineF.GetOutputPort())
outline = vtk.vtkActor()
outline.SetMapper(outlineMapper)
outline.GetProperty().SetColor(colors.GetColor3d("LampBlack"))
#
# Set up shaded surfaces (i.e., supporting geometry).
#
doorGeom = vtk.vtkStructuredGridGeometryFilter()
doorGeom.SetInputConnection(reader.GetOutputPort())
doorGeom.SetExtent(27, 27, 14, 18, 0, 11)
mapDoor = vtk.vtkPolyDataMapper()
mapDoor.SetInputConnection(doorGeom.GetOutputPort())
mapDoor.ScalarVisibilityOff()
door = vtk.vtkActor()
door.SetMapper(mapDoor)
door.GetProperty().SetColor(colors.GetColor3d("Burlywood"))
window1Geom = vtk.vtkStructuredGridGeometryFilter()
window1Geom.SetInputConnection(reader.GetOutputPort())
window1Geom.SetExtent(0, 0, 9, 18, 6, 12)
mapWindow1 = vtk.vtkPolyDataMapper()
mapWindow1.SetInputConnection(window1Geom.GetOutputPort())
mapWindow1.ScalarVisibilityOff()
window1 = vtk.vtkActor()
window1.SetMapper(mapWindow1)
window1.GetProperty().SetColor(colors.GetColor3d("SkyBlue"))
window1.GetProperty().SetOpacity(.6)
window2Geom = vtk.vtkStructuredGridGeometryFilter()
window2Geom.SetInputConnection(reader.GetOutputPort())
window2Geom.SetExtent(5, 12, 23, 23, 6, 12)
mapWindow2 = vtk.vtkPolyDataMapper()
mapWindow2.SetInputConnection(window2Geom.GetOutputPort())
mapWindow2.ScalarVisibilityOff()
window2 = vtk.vtkActor()
window2.SetMapper(mapWindow2)
window2.GetProperty().SetColor(colors.GetColor3d("SkyBlue"))
window2.GetProperty().SetOpacity(.6)
klower1Geom = vtk.vtkStructuredGridGeometryFilter()
klower1Geom.SetInputConnection(reader.GetOutputPort())
klower1Geom.SetExtent(17, 17, 0, 11, 0, 6)
mapKlower1 = vtk.vtkPolyDataMapper()
mapKlower1.SetInputConnection(klower1Geom.GetOutputPort())
mapKlower1.ScalarVisibilityOff()
klower1 = vtk.vtkActor()
klower1.SetMapper(mapKlower1)
klower1.GetProperty().SetColor(colors.GetColor3d("EggShell"))
klower2Geom = vtk.vtkStructuredGridGeometryFilter()
klower2Geom.SetInputConnection(reader.GetOutputPort())
klower2Geom.SetExtent(19, 19, 0, 11, 0, 6)
mapKlower2 = vtk.vtkPolyDataMapper()
mapKlower2.SetInputConnection(klower2Geom.GetOutputPort())
mapKlower2.ScalarVisibilityOff()
klower2 = vtk.vtkActor()
klower2.SetMapper(mapKlower2)
klower2.GetProperty().SetColor(colors.GetColor3d("EggShell"))
klower3Geom = vtk.vtkStructuredGridGeometryFilter()
klower3Geom.SetInputConnection(reader.GetOutputPort())
klower3Geom.SetExtent(17, 19, 0, 0, 0, 6)
mapKlower3 = vtk.vtkPolyDataMapper()
mapKlower3.SetInputConnection(klower3Geom.GetOutputPort())
mapKlower3.ScalarVisibilityOff()
klower3 = vtk.vtkActor()
klower3.SetMapper(mapKlower3)
klower3.GetProperty().SetColor(colors.GetColor3d("EggShell"))
klower4Geom = vtk.vtkStructuredGridGeometryFilter()
klower4Geom.SetInputConnection(reader.GetOutputPort())
klower4Geom.SetExtent(17, 19, 11, 11, 0, 6)
mapKlower4 = vtk.vtkPolyDataMapper()
mapKlower4.SetInputConnection(klower4Geom.GetOutputPort())
mapKlower4.ScalarVisibilityOff()
klower4 = vtk.vtkActor()
klower4.SetMapper(mapKlower4)
klower4.GetProperty().SetColor(colors.GetColor3d("EggShell"))
klower5Geom = vtk.vtkStructuredGridGeometryFilter()
klower5Geom.SetInputConnection(reader.GetOutputPort())
klower5Geom.SetExtent(17, 19, 0, 11, 0, 0)
mapKlower5 = vtk.vtkPolyDataMapper()
mapKlower5.SetInputConnection(klower5Geom.GetOutputPort())
mapKlower5.ScalarVisibilityOff()
klower5 = vtk.vtkActor()
klower5.SetMapper(mapKlower5)
klower5.GetProperty().SetColor(colors.GetColor3d("EggShell"))
klower6Geom = vtk.vtkStructuredGridGeometryFilter()
klower6Geom.SetInputConnection(reader.GetOutputPort())
klower6Geom.SetExtent(17, 19, 0, 7, 6, 6)
mapKlower6 = vtk.vtkPolyDataMapper()
mapKlower6.SetInputConnection(klower6Geom.GetOutputPort())
mapKlower6.ScalarVisibilityOff()
klower6 = vtk.vtkActor()
klower6.SetMapper(mapKlower6)
klower6.GetProperty().SetColor(colors.GetColor3d("EggShell"))
klower7Geom = vtk.vtkStructuredGridGeometryFilter()
klower7Geom.SetInputConnection(reader.GetOutputPort())
klower7Geom.SetExtent(17, 19, 9, 11, 6, 6)
mapKlower7 = vtk.vtkPolyDataMapper()
mapKlower7.SetInputConnection(klower7Geom.GetOutputPort())
mapKlower7.ScalarVisibilityOff()
klower7 = vtk.vtkActor()
klower7.SetMapper(mapKlower7)
klower7.GetProperty().SetColor(colors.GetColor3d("EggShell"))
hood1Geom = vtk.vtkStructuredGridGeometryFilter()
hood1Geom.SetInputConnection(reader.GetOutputPort())
hood1Geom.SetExtent(17, 17, 0, 11, 11, 16)
mapHood1 = vtk.vtkPolyDataMapper()
mapHood1.SetInputConnection(hood1Geom.GetOutputPort())
mapHood1.ScalarVisibilityOff()
hood1 = vtk.vtkActor()
hood1.SetMapper(mapHood1)
hood1.GetProperty().SetColor(colors.GetColor3d("Silver"))
hood2Geom = vtk.vtkStructuredGridGeometryFilter()
hood2Geom.SetInputConnection(reader.GetOutputPort())
hood2Geom.SetExtent(19, 19, 0, 11, 11, 16)
mapHood2 = vtk.vtkPolyDataMapper()
mapHood2.SetInputConnection(hood2Geom.GetOutputPort())
mapHood2.ScalarVisibilityOff()
hood2 = vtk.vtkActor()
hood2.SetMapper(mapHood2)
hood2.GetProperty().SetColor(colors.GetColor3d("Furniture"))
hood3Geom = vtk.vtkStructuredGridGeometryFilter()
hood3Geom.SetInputConnection(reader.GetOutputPort())
hood3Geom.SetExtent(17, 19, 0, 0, 11, 16)
mapHood3 = vtk.vtkPolyDataMapper()
mapHood3.SetInputConnection(hood3Geom.GetOutputPort())
mapHood3.ScalarVisibilityOff()
hood3 = vtk.vtkActor()
hood3.SetMapper(mapHood3)
hood3.GetProperty().SetColor(colors.GetColor3d("Furniture"))
hood4Geom = vtk.vtkStructuredGridGeometryFilter()
hood4Geom.SetInputConnection(reader.GetOutputPort())
hood4Geom.SetExtent(17, 19, 11, 11, 11, 16)
mapHood4 = vtk.vtkPolyDataMapper()
mapHood4.SetInputConnection(hood4Geom.GetOutputPort())
mapHood4.ScalarVisibilityOff()
hood4 = vtk.vtkActor()
hood4.SetMapper(mapHood4)
hood4.GetProperty().SetColor(colors.GetColor3d("Furniture"))
hood6Geom = vtk.vtkStructuredGridGeometryFilter()
hood6Geom.SetInputConnection(reader.GetOutputPort())
hood6Geom.SetExtent(17, 19, 0, 11, 16, 16)
mapHood6 = vtk.vtkPolyDataMapper()
mapHood6.SetInputConnection(hood6Geom.GetOutputPort())
mapHood6.ScalarVisibilityOff()
hood6 = vtk.vtkActor()
hood6.SetMapper(mapHood6)
hood6.GetProperty().SetColor(colors.GetColor3d("Furniture"))
cookingPlateGeom = vtk.vtkStructuredGridGeometryFilter()
cookingPlateGeom.SetInputConnection(reader.GetOutputPort())
cookingPlateGeom.SetExtent(17, 19, 7, 9, 6, 6)
mapCookingPlate = vtk.vtkPolyDataMapper()
mapCookingPlate.SetInputConnection(cookingPlateGeom.GetOutputPort())
mapCookingPlate.ScalarVisibilityOff()
cookingPlate = vtk.vtkActor()
cookingPlate.SetMapper(mapCookingPlate)
cookingPlate.GetProperty().SetColor(colors.GetColor3d("Tomato"))
filterGeom = vtk.vtkStructuredGridGeometryFilter()
filterGeom.SetInputConnection(reader.GetOutputPort())
filterGeom.SetExtent(17, 19, 7, 9, 11, 11)
mapFilter = vtk.vtkPolyDataMapper()
mapFilter.SetInputConnection(filterGeom.GetOutputPort())
mapFilter.ScalarVisibilityOff()
sgfilter = vtk.vtkActor()
sgfilter.SetMapper(mapFilter)
sgfilter.GetProperty().SetColor(colors.GetColor3d("Furniture"))
#
# regular streamlines
#
line = vtk.vtkLineSource()
line.SetResolution(39)
line.SetPoint1(0.08, 2.50, 0.71)
line.SetPoint2(0.08, 4.50, 0.71)
rakeMapper = vtk.vtkPolyDataMapper()
rakeMapper.SetInputConnection(line.GetOutputPort())
rake = vtk.vtkActor()
rake.SetMapper(rakeMapper)
streamers = vtk.vtkStreamTracer()
# streamers.DebugOn()
streamers.SetInputConnection(reader.GetOutputPort())
streamers.SetSourceConnection(line.GetOutputPort())
streamers.SetMaximumPropagation(maxTime)
streamers.SetInitialIntegrationStep(.5)
streamers.SetMinimumIntegrationStep(.1)
streamers.SetIntegratorType(2)
streamers.Update()
streamersMapper = vtk.vtkPolyDataMapper()
streamersMapper.SetInputConnection(streamers.GetOutputPort())
streamersMapper.SetScalarRange(scalarRange)
lines = vtk.vtkActor()
lines.SetMapper(streamersMapper)
lines.GetProperty().SetColor(colors.GetColor3d("Black"))
aren.TwoSidedLightingOn()
aren.AddActor(outline)
aren.AddActor(door)
aren.AddActor(window1)
aren.AddActor(window2)
aren.AddActor(klower1)
aren.AddActor(klower2)
aren.AddActor(klower3)
aren.AddActor(klower4)
aren.AddActor(klower5)
aren.AddActor(klower6)
aren.AddActor(klower7)
aren.AddActor(hood1)
aren.AddActor(hood2)
aren.AddActor(hood3)
aren.AddActor(hood4)
aren.AddActor(hood6)
aren.AddActor(cookingPlate)
aren.AddActor(sgfilter)
aren.AddActor(lines)
aren.AddActor(rake)
aren.SetBackground(colors.GetColor3d("SlateGray"))
aCamera = vtk.vtkCamera()
aren.SetActiveCamera(aCamera)
aren.ResetCamera()
aCamera.SetFocalPoint(3.505, 2.505, 1.255)
aCamera.SetPosition(3.505, 24.6196, 1.255)
aCamera.SetViewUp(0, 0, 1)
aCamera.Azimuth(60)
aCamera.Elevation(30)
aCamera.Dolly(1.5)
aren.ResetCameraClippingRange()
renWin.SetSize(640, 512)
renWin.Render()
# interact with data
iren.Start()
rakes[0].SetPoint1(160, 100, 160)
rakes[0].SetPoint2(160, 200, 160)
rakes[0].SetResolution(50)
rakes[1].SetPoint1(100, 160, 160)
rakes[1].SetPoint2(200, 160, 160)
rakes[1].SetResolution(50)
rakes[2].SetPoint1(160, 160, 100)
rakes[2].SetPoint2(160, 160, 200)
rakes[2].SetResolution(50)
streamLineArr = []
for i in range(0, len(rakes)):
streamLine = vtk.vtkStreamTracer()
streamLine.SetInputConnection(reader.GetOutputPort())
streamLine.SetSourceConnection(rakes[i].GetOutputPort())
streamLine.SetMaximumPropagation(3000)
streamLine.SetIntegrationDirectionToForward()
streamLine.SetIntegratorTypeToRungeKutta4()
streamLineArr.append(streamLine)
# Create the standard renderer, render window and interactor
ren = vtk.vtkRenderer()
renWin = vtk.vtkRenderWindow()
renWin.AddRenderer(ren)
iren = vtk.vtkRenderWindowInteractor()
iren.SetRenderWindow(renWin)
n = len(rakes)
stream_actorArr = []
LineSourceWidget0.SetPoint1(3.05638, -3.00497, 28.2211)
LineSourceWidget0.SetPoint2(3.05638, 3.95916, 28.2211)
LineSourceWidget0.SetResolution(20)
mbds = vtk.vtkMultiBlockDataSet()
mbds.SetNumberOfBlocks(3)
i = 0
while i < 3:
eval("ExtractGrid" + str(i)).Update()
exec("sg" + str(i) + " = vtk.vtkStructuredGrid()")
eval("sg" + str(i)).ShallowCopy(eval("ExtractGrid" + str(i)).GetOutput())
mbds.SetBlock(i, eval("sg" + str(i)))
i += 1
Stream0 = vtk.vtkStreamTracer()
Stream0.SetInputData(mbds)
Stream0.SetSourceConnection(LineSourceWidget0.GetOutputPort())
Stream0.SetIntegrationStepUnit(2)
Stream0.SetMaximumPropagation(20)
Stream0.SetInitialIntegrationStep(0.5)
Stream0.SetIntegrationDirection(0)
Stream0.SetIntegratorType(0)
Stream0.SetMaximumNumberOfSteps(2000)
Stream0.SetTerminalSpeed(1e-12)
#del mbds
aa = vtk.vtkAssignAttribute()
aa.SetInputConnection(Stream0.GetOutputPort())
aa.Assign("Normals", "NORMALS", "POINT_DATA")
def main():
colors = vtk.vtkNamedColors()
fileName1, fileName2, numOfStreamLines, illustration = get_program_parameters(
)
if illustration:
numOfStreamLines = 25
# Start by loading some data.
pl3d = vtk.vtkMultiBlockPLOT3DReader()
pl3d.SetXYZFileName(fileName1)
pl3d.SetQFileName(fileName2)
pl3d.SetScalarFunctionNumber(100) # Density
pl3d.SetVectorFunctionNumber(202) # Momentum
pl3d.Update()
pl3d_output = pl3d.GetOutput().GetBlock(0)
# Create the Renderer, RenderWindow and RenderWindowInteractor.
ren = vtk.vtkRenderer()
renWin = vtk.vtkRenderWindow()
renWin.AddRenderer(ren)
iren = vtk.vtkRenderWindowInteractor()
iren.SetRenderWindow(renWin)
# Needed by: vtkStreamTracer and vtkLineWidget.
seeds = vtk.vtkPolyData()
streamline = vtk.vtkActor()
seeds2 = vtk.vtkPolyData()
streamline2 = vtk.vtkActor()
# The line widget is used seed the streamlines.
lineWidget = vtk.vtkLineWidget()
lineWidget.SetResolution(numOfStreamLines)
lineWidget.SetInputData(pl3d_output)
lineWidget.GetPolyData(seeds)
if illustration:
lineWidget.SetAlignToNone()
lineWidget.SetPoint1(0.974678, 5.073630, 31.217961)
lineWidget.SetPoint2(0.457544, -4.995921, 31.080175)
else:
lineWidget.SetAlignToYAxis()
lineWidget.ClampToBoundsOn()
lineWidget.PlaceWidget()
# Associate the line widget with the interactor and setup callbacks.
lineWidget.SetInteractor(iren)
lineWidget.AddObserver("StartInteractionEvent",
EnableActorCallback(streamline))
lineWidget.AddObserver("InteractionEvent",
GenerateStreamlinesCallback(seeds, renWin))
# The second line widget is used seed more streamlines.
lineWidget2 = vtk.vtkLineWidget()
lineWidget2.SetResolution(numOfStreamLines)
lineWidget2.SetInputData(pl3d_output)
lineWidget2.GetPolyData(seeds2)
lineWidget2.SetKeyPressActivationValue('L')
lineWidget2.SetAlignToZAxis()
lineWidget.ClampToBoundsOn()
lineWidget2.PlaceWidget()
# Associate the line widget with the interactor and setup callbacks.
lineWidget2.SetInteractor(iren)
lineWidget2.AddObserver("StartInteractionEvent",
EnableActorCallback(streamline2))
lineWidget2.AddObserver("InteractionEvent",
GenerateStreamlinesCallback(seeds2, renWin))
# Here we set up two streamlines.
rk4 = vtk.vtkRungeKutta4()
streamer = vtk.vtkStreamTracer()
streamer.SetInputData(pl3d_output)
streamer.SetSourceData(seeds)
streamer.SetMaximumPropagation(100)
streamer.SetInitialIntegrationStep(0.2)
streamer.SetIntegrationDirectionToForward()
streamer.SetComputeVorticity(1)
streamer.SetIntegrator(rk4)
rf = vtk.vtkRibbonFilter()
rf.SetInputConnection(streamer.GetOutputPort())
rf.SetWidth(0.1)
rf.SetWidthFactor(5)
streamMapper = vtk.vtkPolyDataMapper()
streamMapper.SetInputConnection(rf.GetOutputPort())
streamMapper.SetScalarRange(pl3d_output.GetScalarRange())
streamline.SetMapper(streamMapper)
streamline.VisibilityOff()
streamer2 = vtk.vtkStreamTracer()
streamer2.SetInputData(pl3d_output)
streamer2.SetSourceData(seeds2)
streamer2.SetMaximumPropagation(100)
streamer2.SetInitialIntegrationStep(0.2)
streamer2.SetIntegrationDirectionToForward()
streamer2.SetComputeVorticity(1)
streamer2.SetIntegrator(rk4)
rf2 = vtk.vtkRibbonFilter()
rf2.SetInputConnection(streamer2.GetOutputPort())
rf2.SetWidth(0.1)
rf2.SetWidthFactor(5)
streamMapper2 = vtk.vtkPolyDataMapper()
streamMapper2.SetInputConnection(rf2.GetOutputPort())
streamMapper2.SetScalarRange(pl3d_output.GetScalarRange())
streamline2.SetMapper(streamMapper2)
streamline2.VisibilityOff()
# Get an outline of the data set for context.
outline = vtk.vtkStructuredGridOutlineFilter()
outline.SetInputData(pl3d_output)
outlineMapper = vtk.vtkPolyDataMapper()
outlineMapper.SetInputConnection(outline.GetOutputPort())
outlineActor = vtk.vtkActor()
outlineActor.GetProperty().SetColor(colors.GetColor3d("Black"))
outlineActor.SetMapper(outlineMapper)
# Add the actors to the renderer, set the background and size.
ren.AddActor(outlineActor)
ren.AddActor(streamline)
ren.AddActor(streamline2)
renWin.SetSize(512, 512)
cam = ren.GetActiveCamera()
if illustration:
# We need to directly display the streamlines in this case.
lineWidget.EnabledOn()
streamline.VisibilityOn()
lineWidget.GetPolyData(seeds)
renWin.Render()
cam.SetClippingRange(14.216207, 68.382915)
cam.SetFocalPoint(9.718210, 0.458166, 29.399900)
cam.SetPosition(-15.827551, -16.997463, 54.003120)
cam.SetViewUp(0.616076, 0.179428, 0.766979)
ren.SetBackground(colors.GetColor3d("Silver"))
else:
cam.SetClippingRange(3.95297, 50)
cam.SetFocalPoint(9.71821, 0.458166, 29.3999)
cam.SetPosition(2.7439, -37.3196, 38.7167)
cam.SetViewUp(-0.16123, 0.264271, 0.950876)
ren.SetBackground(colors.GetColor3d("Silver"))
iren.Initialize()
renWin.Render()
iren.Start()
def plot(self, struct):
# Crea self. data1, legend, filename, fieldname, dim, has_field, tracker, revision
if not self.call_config(struct):
return
# Actualiza campos
self.update_field_type('vector', True)
self.update_legend_data()
# Crea self.src
if not self.call_src():
return
# Obtenemos los vectores
self.ugrid = self.construct_data(self.src)
self.src_vc = vtk.vtkAssignAttribute()
if vtk.vtkVersion.GetVTKMajorVersion() < 6:
self.src_vc.SetInput(self.ugrid)
else:
self.src_vc.SetInputData(self.ugrid)
# Segunda parte para incluir el visor
# Pinta los elementos
# Obtiene los centros de las celdas si se usa dicho tipo de elemento
if self.data1.get(
'fielddomain'
) == 'cell': # vtk does not seem to support cell vectors
self.cellcenters = vtk.vtkCellCenters()
self.cellcenters.SetInputConnection(self.src_vc.GetOutputPort())
self.cellcenters_click = vtk.vtkCellCenters() # ALPHA-vc
self.cellcenters_click.SetInputConnection(
self.src.GetOutputPort()) # ALPHA-vc
self.ini_params()
#I##############################################################################
####### Inicializamos el dibujante #############################################
# Create source for streamtubes
self.seeds = vtk.vtkPointSource()
self.seeds.SetRadius(
self.lastradio) # zona que abarca la salida de puntos
self.seeds.SetCenter(self.lastcenter)
print '====>plot ->> self.seeds.SetCenter', self.lastcenter[
0], ',', self.lastcenter[1], ',', self.lastcenter[2]
self.seeds.SetNumberOfPoints(self.lastnlin)
self.lin = vtk.vtkStreamTracer()
self.lin.SetInputConnection(self.src.GetOutputPort())
if vtk.vtkVersion.GetVTKMajorVersion() < 6:
self.lin.SetSource(self.seeds.GetOutput())
else:
self.lin.SetSourceConnection(self.seeds.GetOutputPort())
####### Configuramos el dibujante ##############################################
self.lin.SetStartPosition(self.lastcenter)
print '====>plot ->> self.lin.SetStartPosition', self.lastcenter[
0], ',', self.lastcenter[1], ',', self.lastcenter[2]
self.lin.SetMaximumPropagation(500)
self.lin.SetInitialIntegrationStep(0.5)
#self.lin.SetIntegrationStepUnit(2) # 2 = CELL_LENGTH_UNIT
self.lin.SetIntegrationDirectionToBoth()
integ = vtk.vtkRungeKutta4()
self.lin.SetIntegrator(integ)
####### Configuramos el filtro #################################################
self.streamTube = vtk.vtkTubeFilter()
self.streamTube.SetInputConnection(self.lin.GetOutputPort())
self.streamTube.SetInputArrayToProcess(1, 0, 0, 0, 1)
self.streamTube.SetRadius(self.lastancho)
self.streamTube.SetNumberOfSides(12)
self.streamTube.SetVaryRadiusToVaryRadiusByVector()
#F###### Configuramos la tabla de colores ######################################
# Iniicializamos la tabla de asignacion de colores
self.lut = vtk.vtkLookupTable()
self.lut.SetRampToLinear()
self.lut.SetScaleToLinear()
self.lut.SetVectorModeToMagnitude(
) # When using vector magnitude for coloring
self.lut.Build()
if self.vectors is not None:
self.lutrange = self.vectors.GetRange(-1)
self.lut.SetTableRange(self.lutrange)
####### Configuramos el mapper #################################################
self.pdM = vtk.vtkPolyDataMapper()
self.pdM.SetInputConnection(self.streamTube.GetOutputPort())
#Definicion del campo y el rango para colorear
if self.vectors is not None:
self.pdM.SelectColorArray(self.vectors.GetName())
self.pdM.SetScalarRange(self.lutrange)
if self.data1.get('fielddomain') == 'cell':
self.pdM.SetScalarModeToUseCellFieldData()
else:
self.pdM.SetScalarModeToUsePointFieldData()
self.pdM.SetColorModeToMapScalars()
self.pdM.InterpolateScalarsBeforeMappingOff()
self.pdM.ScalarVisibilityOn()
self.pdM.SetLookupTable(self.lut)
self.pdM.UseLookupTableScalarRangeOn()
self.pdM.Update()
####### Configuramos el actor ##################################################
self.linA = vtk.vtkActor()
self.linA.SetMapper(self.pdM)
self.linA.VisibilityOn()
self.linA.GetProperty().SetAmbient(1.0)
self.linA.GetProperty().SetDiffuse(0.0)
self.linA.GetProperty().SetSpecular(0.0)
#F##############################################################################
#para mostrar surface e wireframe ao mesmo tempo
self.wireM2 = vtk.vtkDataSetMapper()
self.wireM2.SetInputConnection(self.src_vc.GetOutputPort())
self.wireM2.ScalarVisibilityOff()
self.wireA2 = vtk.vtkActor()
self.wireA2.SetMapper(self.wireM2)
self.wireA2.GetProperty().SetRepresentationToWireframe()
self.wireA2.GetProperty().SetColor(Plot.edges_color)
self.add_opacity_2([self.linA,
self.wireA2]) # Opacity: 100%/75%/50%/25%/0%
# Incluimos los actores en el renderer
self.rens[0].AddActor(self.wireA2)
self.rens[0].AddActor(self.linA)
# Si estamos en modo interactivo configuramos el clicker
if interactive:
self.set_iren() # Configura el interactor
if self.data1.get('fielddomain') == 'cell':
self.clicker.set_point_cell('point') # así ok
self.clicker.set_objects(self.cellcenters_click, self.rens[0],
self.iren, self.widget) # ALPHA-vc
else:
self.clicker.set_point_cell(self.data1.get('fielddomain'))
self.clicker.set_objects(self.src, self.rens[0], self.iren,
self.widget) # ALPHA-vc
self.clicker.set_props([self.wireA2])
self.clicker.setup()
# Obtenemos los datos si los hay en el xml
newlast = self.read_params(struct)
changed = self.test_params(newlast)
if changed:
self.apply_params()
# Reseteamos las camaras de todos los renderers
for ren in self.rens: # WORKAROUND (aparecia non centrada) // + outline
ren.ResetCamera()
# Incluye la barra de escala si tenemos vectores
if self.vectors is not None:
self.scalarrange.local_set(self.lutrange)
self.add_scalarbar_1()
self.add_scalarbar_2(self.lut)
self.add_outline_2(self.src_vc)
self.done = True
def _process_series(self, series):
self._init_cyclers()
self._fig.auto_rendering = False
# clear data
for o in self._fig.objects:
self._fig.remove_class(o)
for ii, s in enumerate(series):
if s.is_3Dline and s.is_point:
x, y, z, _ = s.get_data()
positions = np.vstack([x, y, z]).T.astype(np.float32)
a = dict(point_size=0.2,
color=self._convert_to_int(next(self._cl)))
line_kw = self._kwargs.get("line_kw", dict())
plt_points = k3d.points(positions=positions,
**merge({}, a, line_kw))
plt_points.shader = "mesh"
self._fig += plt_points
elif s.is_3Dline:
x, y, z, param = s.get_data()
# K3D doesn't like masked arrays, so filled them with NaN
x, y, z = [
np.ma.filled(t)
if isinstance(t, np.ma.core.MaskedArray) else t
for t in [x, y, z]
]
vertices = np.vstack([x, y, z]).T.astype(np.float32)
# keyword arguments for the line object
a = dict(
width=0.1,
name=s.label
if self._kwargs.get("show_label", False) else None,
color=self._convert_to_int(next(self._cl)),
shader="mesh",
)
if self._use_cm:
a["attribute"] = (param.astype(np.float32), )
a["color_map"] = next(self._cm)
a["color_range"] = [s.start, s.end]
line_kw = self._kwargs.get("line_kw", dict())
line = k3d.line(vertices, **merge({}, a, line_kw))
self._fig += line
elif (s.is_3Dsurface and
(not s.is_complex)) or (s.is_3Dsurface and s.is_complex and
(s.real or s.imag or s.abs)):
x, y, z = s.get_data()
# K3D doesn't like masked arrays, so filled them with NaN
x, y, z = [
np.ma.filled(t)
if isinstance(t, np.ma.core.MaskedArray) else t
for t in [x, y, z]
]
# TODO:
# Can I use get_vertices_indices also for non parametric surfaces?
if s.is_parametric:
vertices, indices = get_vertices_indices(x, y, z)
vertices = vertices.astype(np.float32)
else:
x = x.flatten()
y = y.flatten()
z = z.flatten()
vertices = np.vstack([x, y, z]).T.astype(np.float32)
indices = Triangulation(x, y).triangles.astype(np.uint32)
self._high_aspect_ratio(x, y, z)
a = dict(
name=s.label
if self._kwargs.get("show_label", False) else None,
side="double",
flat_shading=False,
wireframe=False,
color=self._convert_to_int(next(self._cl)),
)
if self._use_cm:
a["color_map"] = next(self._cm)
a["attribute"] = z.astype(np.float32)
surface_kw = self._kwargs.get("surface_kw", dict())
surf = k3d.mesh(vertices, indices, **merge({}, a, surface_kw))
self._fig += surf
elif s.is_3Dvector and self._kwargs.get("streamlines", False):
xx, yy, zz, uu, vv, ww = s.get_data()
# K3D doesn't like masked arrays, so filled them with NaN
xx, yy, zz, uu, vv, ww = [
np.ma.filled(t)
if isinstance(t, np.ma.core.MaskedArray) else t
for t in [xx, yy, zz, uu, vv, ww]
]
magnitude = np.sqrt(uu**2 + vv**2 + ww**2)
min_mag = min(magnitude.flatten())
max_mag = max(magnitude.flatten())
import vtk
from vtk.util import numpy_support
vector_field = np.array(
[uu.flatten(), vv.flatten(),
ww.flatten()]).T
vtk_vector_field = numpy_support.numpy_to_vtk(
num_array=vector_field,
deep=True,
array_type=vtk.VTK_FLOAT)
vtk_vector_field.SetName("vector_field")
points = vtk.vtkPoints()
points.SetNumberOfPoints(s.n2 * s.n1 * s.n3)
for i, (x, y, z) in enumerate(
zip(xx.flatten(), yy.flatten(), zz.flatten())):
points.SetPoint(i, [x, y, z])
grid = vtk.vtkStructuredGrid()
grid.SetDimensions([s.n2, s.n1, s.n3])
grid.SetPoints(points)
grid.GetPointData().SetVectors(vtk_vector_field)
stream_kw = self._kwargs.get("stream_kw", dict())
starts = stream_kw.pop("starts", None)
max_prop = stream_kw.pop("max_prop", 500)
streamer = vtk.vtkStreamTracer()
streamer.SetInputData(grid)
streamer.SetMaximumPropagation(max_prop)
if starts is None:
seeds_points = get_seeds_points(xx, yy, zz, uu, vv, ww)
seeds = vtk.vtkPolyData()
points = vtk.vtkPoints()
for p in seeds_points:
points.InsertNextPoint(p)
seeds.SetPoints(points)
streamer.SetSourceData(seeds)
streamer.SetIntegrationDirectionToForward()
elif isinstance(starts, dict):
if not all([t in starts.keys() for t in ["x", "y", "z"]]):
raise KeyError(
"``starts`` must contains the following keys: " +
"'x', 'y', 'z', whose values are going to be " +
"lists of coordinates.")
seeds_points = np.array(
[starts["x"], starts["y"], starts["z"]]).T
seeds = vtk.vtkPolyData()
points = vtk.vtkPoints()
for p in seeds_points:
points.InsertNextPoint(p)
seeds.SetPoints(points)
streamer.SetSourceData(seeds)
streamer.SetIntegrationDirectionToBoth()
else:
npoints = stream_kw.get("npoints", 200)
radius = stream_kw.get("radius", None)
center = 0, 0, 0
if not radius:
xmin, xmax = min(xx[0, :, 0]), max(xx[0, :, 0])
ymin, ymax = min(yy[:, 0, 0]), max(yy[:, 0, 0])
zmin, zmax = min(zz[0, 0, :]), max(zz[0, 0, :])
radius = max([
abs(xmax - xmin),
abs(ymax - ymin),
abs(zmax - zmin)
])
center = (xmax - xmin) / 2, (ymax - ymin) / 2, (
zmax - zmin) / 2
seeds = vtk.vtkPointSource()
seeds.SetRadius(radius)
seeds.SetCenter(*center)
seeds.SetNumberOfPoints(npoints)
streamer.SetSourceConnection(seeds.GetOutputPort())
streamer.SetIntegrationDirectionToBoth()
streamer.SetComputeVorticity(0)
streamer.SetIntegrator(vtk.vtkRungeKutta4())
streamer.Update()
streamline = streamer.GetOutput()
streamlines_points = numpy_support.vtk_to_numpy(
streamline.GetPoints().GetData())
streamlines_velocity = numpy_support.vtk_to_numpy(
streamline.GetPointData().GetArray("vector_field"))
streamlines_speed = np.linalg.norm(streamlines_velocity,
axis=1)
vtkLines = streamline.GetLines()
vtkLines.InitTraversal()
point_list = vtk.vtkIdList()
lines = []
lines_attributes = []
while vtkLines.GetNextCell(point_list):
start_id = point_list.GetId(0)
end_id = point_list.GetId(point_list.GetNumberOfIds() - 1)
l = []
v = []
for i in range(start_id, end_id):
l.append(streamlines_points[i])
v.append(streamlines_speed[i])
lines.append(np.array(l))
lines_attributes.append(np.array(v))
count = sum([len(l) for l in lines])
vertices = np.nan * np.zeros((count + (len(lines) - 1), 3))
attributes = np.zeros(count + (len(lines) - 1))
c = 0
for k, (l, a) in enumerate(zip(lines, lines_attributes)):
vertices[c:c + len(l), :] = l
attributes[c:c + len(l)] = a
if k < len(lines) - 1:
c = c + len(l) + 1
skw = dict(width=0.1, shader="mesh", compression_level=9)
if self._use_cm and ("color" not in stream_kw.keys()):
skw["color_map"] = next(self._cm)
skw["color_range"] = [min_mag, max_mag]
skw["attribute"] = attributes
else:
col = stream_kw.pop("color", next(self._cl))
if not isinstance(col, int):
col = self._convert_to_int(col)
stream_kw["color"] = col
self._fig += k3d.line(vertices.astype(np.float32),
**merge({}, skw, stream_kw))
elif s.is_3Dvector:
xx, yy, zz, uu, vv, ww = s.get_data()
# K3D doesn't like masked arrays, so filled them with NaN
xx, yy, zz, uu, vv, ww = [
np.ma.filled(t)
if isinstance(t, np.ma.core.MaskedArray) else t
for t in [xx, yy, zz, uu, vv, ww]
]
xx, yy, zz, uu, vv, ww = [
t.flatten().astype(np.float32)
for t in [xx, yy, zz, uu, vv, ww]
]
# default values
qkw = dict(scale=1)
# user provided values
quiver_kw = self._kwargs.get("quiver_kw", dict())
qkw = merge(qkw, quiver_kw)
scale = qkw["scale"]
magnitude = np.sqrt(uu**2 + vv**2 + ww**2)
vectors = np.array((uu, vv, ww)).T * scale
origins = np.array((xx, yy, zz)).T
if self._use_cm and ("color" not in quiver_kw.keys()):
colormap = next(self._cm)
colors = k3d.helpers.map_colors(magnitude, colormap, [])
self._handles[ii] = [qkw, colormap]
else:
col = quiver_kw.get("color", next(self._cl))
if not isinstance(col, int):
col = self._convert_to_int(col)
colors = col * np.ones(len(magnitude))
self._handles[ii] = [qkw, None]
vec_colors = np.zeros(2 * len(colors))
for i, c in enumerate(colors):
vec_colors[2 * i] = c
vec_colors[2 * i + 1] = c
vec_colors = vec_colors.astype(np.uint32)
vec = k3d.vectors(
origins=origins - vectors / 2,
vectors=vectors,
colors=vec_colors,
)
self._fig += vec
elif s.is_complex and s.is_3Dsurface and (
not s.is_domain_coloring):
x, y, mag_arg, colors, colorscale = s.get_data()
mag, arg = mag_arg[:, :, 0], mag_arg[:, :, 1]
x, y, z = [t.flatten() for t in [x, y, mag]]
vertices = np.vstack([x, y, z]).T.astype(np.float32)
indices = Triangulation(x, y).triangles.astype(np.uint32)
self._high_aspect_ratio(x, y, z)
a = dict(
name=s.label
if self._kwargs.get("show_label", False) else None,
side="double",
flat_shading=False,
wireframe=False,
color=self._convert_to_int(next(self._cl)),
color_range=[-np.pi, np.pi],
)
if self._use_cm:
colors = colors.reshape((-1, 3))
a["colors"] = [self._rgb_to_int(c) for c in colors]
r = []
loc = np.linspace(0, 1, colorscale.shape[0])
colorscale = colorscale / 255
for l, c in zip(loc, colorscale):
r.append(l)
r += list(c)
a["color_map"] = r
a["color_range"] = [-np.pi, np.pi]
surface_kw = self._kwargs.get("surface_kw", dict())
surf = k3d.mesh(vertices, indices, **merge({}, a, surface_kw))
self._fig += surf
else:
raise NotImplementedError(
"{} is not supported by {}\n".format(
type(s),
type(self).__name__) +
"K3D-Jupyter only supports 3D plots.")
xl = self.xlabel if self.xlabel else "x"
yl = self.ylabel if self.ylabel else "y"
zl = self.zlabel if self.zlabel else "z"
self._fig.axes = [xl, yl, zl]
if self.title:
self._fig += k3d.text2d(self.title,
position=[0.025, 0.015],
color=0,
size=1,
label_box=False)
self._fig.auto_rendering = True
def _plotInternal(self):
"""Overrides baseclass implementation."""
# Preserve time and z axis for plotting these inof in rendertemplate
projection = vcs.elements["projection"][self._gm.projection]
zaxis, taxis = self.getZandT()
# Streamline color
if (not self._gm.coloredbyvector):
ln_tmp = self._gm.linetype
if ln_tmp is None:
ln_tmp = "default"
try:
ln_tmp = vcs.getline(ln_tmp)
lwidth = ln_tmp.width[0] # noqa
lcolor = ln_tmp.color[0]
lstyle = ln_tmp.type[0] # noqa
except Exception:
lstyle = "solid" # noqa
lwidth = 1. # noqa
lcolor = [0., 0., 0., 100.]
if self._gm.linewidth is not None:
lwidth = self._gm.linewidth # noqa
if self._gm.linecolor is not None:
lcolor = self._gm.linecolor
# The unscaled continent bounds were fine in the presence of axis
# conversion, so save them here
continentBounds = vcs2vtk.computeDrawAreaBounds(
self._vtkDataSetBoundsNoMask, self._context_flipX,
self._context_flipY)
# Only scaling the data in the presence of axis conversion changes
# the seed points in any other cases, and thus results in plots
# different from the baselines but still fundamentally sound, it
# seems. Always scaling the data results in no differences in the
# plots between Context2D and the old baselines.
# Transform the input data
T = vtk.vtkTransform()
T.Scale(self._context_xScale, self._context_yScale, 1.)
self._vtkDataSetFittedToViewport = vcs2vtk.applyTransformationToDataset(
T, self._vtkDataSetFittedToViewport)
self._vtkDataSetBoundsNoMask = self._vtkDataSetFittedToViewport.GetBounds(
)
polydata = self._vtkDataSetFittedToViewport
plotting_dataset_bounds = self.getPlottingBounds()
x1, x2, y1, y2 = plotting_dataset_bounds
vp = self._resultDict.get('ratio_autot_viewport', [
self._template.data.x1, self._template.data.x2,
self._template.data.y1, self._template.data.y2
])
# view and interactive area
view = self._context().contextView
area = vtk.vtkInteractiveArea()
view.GetScene().AddItem(area)
drawAreaBounds = vcs2vtk.computeDrawAreaBounds(
self._vtkDataSetBoundsNoMask, self._context_flipX,
self._context_flipY)
[renWinWidth, renWinHeight] = self._context().renWin.GetSize()
geom = vtk.vtkRecti(int(round(vp[0] * renWinWidth)),
int(round(vp[2] * renWinHeight)),
int(round((vp[1] - vp[0]) * renWinWidth)),
int(round((vp[3] - vp[2]) * renWinHeight)))
vcs2vtk.configureContextArea(area, drawAreaBounds, geom)
dataLength = polydata.GetLength()
if (not self._gm.evenlyspaced):
# generate random seeds in a circle centered in the center of
# the bounding box for the data.
# by default vtkPointSource uses a global random source in vtkMath which is
# seeded only once. It makes more sense to seed a random sequence each time you draw
# the streamline plot.
pointSequence = vtk.vtkMinimalStandardRandomSequence()
pointSequence.SetSeedOnly(1177) # replicate the seed from vtkMath
seed = vtk.vtkPointSource()
seed.SetNumberOfPoints(self._gm.numberofseeds)
seed.SetCenter(polydata.GetCenter())
seed.SetRadius(dataLength / 2.0)
seed.SetRandomSequence(pointSequence)
seed.Update()
seedData = seed.GetOutput()
# project all points to Z = 0 plane
points = seedData.GetPoints()
for i in range(0, points.GetNumberOfPoints()):
p = list(points.GetPoint(i))
p[2] = 0
points.SetPoint(i, p)
if (self._gm.integratortype == 0):
integrator = vtk.vtkRungeKutta2()
elif (self._gm.integratortype == 1):
integrator = vtk.vtkRungeKutta4()
else:
if (self._gm.evenlyspaced):
warnings.warn(
"You cannot use RungeKutta45 for evenly spaced streamlines."
"Using RungeKutta4 instead")
integrator = vtk.vtkRungeKutta4()
else:
integrator = vtk.vtkRungeKutta45()
if (self._gm.evenlyspaced):
streamer = vtk.vtkEvenlySpacedStreamlines2D()
startseed = self._gm.startseed \
if self._gm.startseed else polydata.GetCenter()
streamer.SetStartPosition(startseed)
streamer.SetSeparatingDistance(self._gm.separatingdistance)
streamer.SetSeparatingDistanceRatio(
self._gm.separatingdistanceratio)
streamer.SetClosedLoopMaximumDistance(
self._gm.closedloopmaximumdistance)
else:
# integrate streamlines on normalized vector so that
# IntegrationTime stores distance
streamer = vtk.vtkStreamTracer()
streamer.SetSourceData(seedData)
streamer.SetIntegrationDirection(self._gm.integrationdirection)
streamer.SetMinimumIntegrationStep(self._gm.minimumsteplength)
streamer.SetMaximumIntegrationStep(self._gm.maximumsteplength)
streamer.SetMaximumError(self._gm.maximumerror)
streamer.SetMaximumPropagation(dataLength *
self._gm.maximumstreamlinelength)
streamer.SetInputData(polydata)
streamer.SetInputArrayToProcess(0, 0, 0, 0, "vector")
streamer.SetIntegrationStepUnit(self._gm.integrationstepunit)
streamer.SetInitialIntegrationStep(self._gm.initialsteplength)
streamer.SetMaximumNumberOfSteps(self._gm.maximumsteps)
streamer.SetTerminalSpeed(self._gm.terminalspeed)
streamer.SetIntegrator(integrator)
# add arc_length to streamlines
arcLengthFilter = vtk.vtkAppendArcLength()
arcLengthFilter.SetInputConnection(streamer.GetOutputPort())
arcLengthFilter.Update()
streamlines = arcLengthFilter.GetOutput()
# glyph seed points
contour = vtk.vtkContourFilter()
contour.SetInputConnection(arcLengthFilter.GetOutputPort())
contour.SetValue(0, 0.001)
if (streamlines.GetNumberOfPoints()):
r = streamlines.GetPointData().GetArray("arc_length").GetRange()
numberofglyphsoneside = self._gm.numberofglyphs // 2
for i in range(1, numberofglyphsoneside):
contour.SetValue(i, r[1] / numberofglyphsoneside * i)
else:
warnings.warn(
"No streamlines created. "
"The 'startseed' parameter needs to be inside the domain and "
"not over masked data.")
contour.SetInputArrayToProcess(0, 0, 0, 0, "arc_length")
# arrow glyph source
glyph2DSource = vtk.vtkGlyphSource2D()
glyph2DSource.SetGlyphTypeToTriangle()
glyph2DSource.SetRotationAngle(-90)
glyph2DSource.SetFilled(self._gm.filledglyph)
# arrow glyph adjustment
transform = vtk.vtkTransform()
transform.Scale(1., self._gm.glyphbasefactor, 1.)
transformFilter = vtk.vtkTransformFilter()
transformFilter.SetInputConnection(glyph2DSource.GetOutputPort())
transformFilter.SetTransform(transform)
transformFilter.Update()
glyphLength = transformFilter.GetOutput().GetLength()
# drawing the glyphs at the seed points
glyph = vtk.vtkGlyph2D()
glyph.SetInputConnection(contour.GetOutputPort())
glyph.SetInputArrayToProcess(1, 0, 0, 0, "vector")
glyph.SetSourceData(transformFilter.GetOutput())
glyph.SetScaleModeToDataScalingOff()
glyph.SetScaleFactor(dataLength * self._gm.glyphscalefactor /
glyphLength)
glyph.SetColorModeToColorByVector()
glyphMapper = vtk.vtkPolyDataMapper()
glyphActor = vtk.vtkActor()
mapper = vtk.vtkPolyDataMapper()
act = vtk.vtkActor()
glyph.Update()
glyphDataset = glyph.GetOutput()
streamer.Update()
lineDataset = streamer.GetOutput()
deleteLineColors = False
deleteGlyphColors = False
# color the streamlines and glyphs
cmap = self.getColorMap()
if (self._gm.coloredbyvector):
numLevels = len(self._contourLevels) - 1
while len(self._contourColors) < numLevels:
self._contourColors.append(self._contourColors[-1])
lut = vtk.vtkLookupTable()
lut.SetNumberOfTableValues(numLevels)
for i in range(numLevels):
r, g, b, a = self.getColorIndexOrRGBA(cmap,
self._contourColors[i])
lut.SetTableValue(i, r / 100., g / 100., b / 100., a / 100.)
lut.SetVectorModeToMagnitude()
if numpy.allclose(self._contourLevels[0], -1.e20):
lmn = self._vectorRange[0]
else:
lmn = self._contourLevels[0][0]
if numpy.allclose(self._contourLevels[-1], 1.e20):
lmx = self._vectorRange[1]
else:
lmx = self._contourLevels[-1][-1]
lut.SetRange(lmn, lmx)
mapper.ScalarVisibilityOn()
mapper.SetLookupTable(lut)
mapper.UseLookupTableScalarRangeOn()
mapper.SetScalarModeToUsePointFieldData()
mapper.SelectColorArray("vector")
lineAttrs = lineDataset.GetPointData()
lineData = lineAttrs.GetArray("vector")
if lineData and numLevels:
lineColors = lut.MapScalars(lineData,
vtk.VTK_COLOR_MODE_DEFAULT, 0)
deleteLineColors = True
else:
print(
'WARNING: streamline pipeline cannot map scalars for "lineData", using solid color'
)
numTuples = lineDataset.GetNumberOfPoints()
color = [0, 0, 0, 255]
lineColors = vcs2vtk.generateSolidColorArray(numTuples, color)
glyphMapper.ScalarVisibilityOn()
glyphMapper.SetLookupTable(lut)
glyphMapper.UseLookupTableScalarRangeOn()
glyphMapper.SetScalarModeToUsePointFieldData()
glyphMapper.SelectColorArray("VectorMagnitude")
glyphAttrs = glyphDataset.GetPointData()
glyphData = glyphAttrs.GetArray("VectorMagnitude")
if glyphData and numLevels:
glyphColors = lut.MapScalars(glyphData,
vtk.VTK_COLOR_MODE_DEFAULT, 0)
deleteGlyphColors = True
else:
print(
'WARNING: streamline pipeline cannot map scalars for "glyphData", using solid color'
)
numTuples = glyphDataset.GetNumberOfPoints()
color = [0, 0, 0, 255]
glyphColors = vcs2vtk.generateSolidColorArray(numTuples, color)
else:
mapper.ScalarVisibilityOff()
glyphMapper.ScalarVisibilityOff()
if isinstance(lcolor, (list, tuple)):
r, g, b, a = lcolor
else:
r, g, b, a = cmap.index[lcolor]
act.GetProperty().SetColor(r / 100., g / 100., b / 100.)
glyphActor.GetProperty().SetColor(r / 100., g / 100., b / 100.)
fixedColor = [
int((r / 100.) * 255),
int((g / 100.) * 255),
int((b / 100.) * 255), 255
]
numTuples = lineDataset.GetNumberOfPoints()
lineColors = vcs2vtk.generateSolidColorArray(numTuples, fixedColor)
numTuples = glyphDataset.GetNumberOfPoints()
glyphColors = vcs2vtk.generateSolidColorArray(
numTuples, fixedColor)
# Add the streamlines
lineItem = vtk.vtkPolyDataItem()
lineItem.SetPolyData(lineDataset)
lineItem.SetScalarMode(vtk.VTK_SCALAR_MODE_USE_POINT_DATA)
lineItem.SetMappedColors(lineColors)
if deleteLineColors:
lineColors.FastDelete()
area.GetDrawAreaItem().AddItem(lineItem)
# Add the glyphs
glyphItem = vtk.vtkPolyDataItem()
glyphItem.SetPolyData(glyphDataset)
glyphItem.SetScalarMode(vtk.VTK_SCALAR_MODE_USE_POINT_DATA)
glyphItem.SetMappedColors(glyphColors)
if deleteGlyphColors:
glyphColors.FastDelete()
area.GetDrawAreaItem().AddItem(glyphItem)
plotting_dataset_bounds = self.getPlottingBounds()
vp = self._resultDict.get('ratio_autot_viewport', [
self._template.data.x1, self._template.data.x2,
self._template.data.y1, self._template.data.y2
])
kwargs = {
'vtk_backend_grid':
self._vtkDataSet,
'dataset_bounds':
self._vtkDataSetBounds,
'plotting_dataset_bounds':
plotting_dataset_bounds,
"vtk_dataset_bounds_no_mask":
self._vtkDataSetBoundsNoMask,
'vtk_backend_geo':
self._vtkGeoTransform,
"vtk_backend_draw_area_bounds":
continentBounds,
"vtk_backend_viewport_scale":
[self._context_xScale, self._context_yScale]
}
if ('ratio_autot_viewport' in self._resultDict):
kwargs["ratio_autot_viewport"] = vp
self._resultDict.update(self._context().renderTemplate(
self._template, self._data1, self._gm, taxis, zaxis, **kwargs))
if (self._gm.coloredbyvector):
self._resultDict.update(self._context().renderColorBar(
self._template, self._contourLevels, self._contourColors, None,
self.getColorMap()))
kwargs['xaxisconvert'] = self._gm.xaxisconvert
kwargs['yaxisconvert'] = self._gm.yaxisconvert
if self._data1.getAxis(-1).isLongitude() and self._data1.getAxis(
-2).isLatitude():
self._context().plotContinents(
self._plot_kargs.get("continents", self._useContinents),
plotting_dataset_bounds, projection, self._dataWrapModulo, vp,
self._template.data.priority, **kwargs)
self._resultDict["vtk_backend_actors"] = [[
lineItem, plotting_dataset_bounds
]]
self._resultDict["vtk_backend_luts"] = [[None, None]]
def office(fileName, center):
# These are the centers for the streamline seed.
seedCenters = [[0.0, 2.1, 0.5], [0.1, 2.1, 0.5], [0.1, 2.7, 0.5],
[0.08, 2.7, 0.5]]
center = abs(center)
if center >= len(seedCenters):
center = len(seedCenters) - 1
colors = vtk.vtkNamedColors()
# Set the furniture colors, matching those in the VTKTextBook.
tableTopColor = [0.59, 0.427, 0.392]
filingCabinetColor = [0.8, 0.8, 0.6]
bookShelfColor = [0.8, 0.8, 0.6]
windowColor = [0.3, 0.3, 0.5]
colors.SetColor("TableTop", *tableTopColor)
colors.SetColor("FilingCabinet", *filingCabinetColor)
colors.SetColor("BookShelf", *bookShelfColor)
colors.SetColor("WindowColor", *windowColor)
# We read a data file that represents a CFD analysis of airflow in an office
# (with ventilation and a burning cigarette).
reader = vtk.vtkDataSetReader()
reader.SetFileName(fileName)
# Create the scene.
# We generate a whole bunch of planes which correspond to
# the geometry in the analysis; tables, bookshelves and so on.
table1 = vtk.vtkStructuredGridGeometryFilter()
table1.SetInputData(reader.GetStructuredGridOutput())
table1.SetExtent(11, 15, 7, 9, 8, 8)
mapTable1 = vtk.vtkPolyDataMapper()
mapTable1.SetInputConnection(table1.GetOutputPort())
mapTable1.ScalarVisibilityOff()
table1Actor = vtk.vtkActor()
table1Actor.SetMapper(mapTable1)
table1Actor.GetProperty().SetColor(colors.GetColor3d("TableTop"))
table2 = vtk.vtkStructuredGridGeometryFilter()
table2.SetInputData(reader.GetStructuredGridOutput())
table2.SetExtent(11, 15, 10, 12, 8, 8)
mapTable2 = vtk.vtkPolyDataMapper()
mapTable2.SetInputConnection(table2.GetOutputPort())
mapTable2.ScalarVisibilityOff()
table2Actor = vtk.vtkActor()
table2Actor.SetMapper(mapTable2)
table2Actor.GetProperty().SetColor(colors.GetColor3d("TableTop"))
FilingCabinet1 = vtk.vtkStructuredGridGeometryFilter()
FilingCabinet1.SetInputData(reader.GetStructuredGridOutput())
FilingCabinet1.SetExtent(15, 15, 7, 9, 0, 8)
mapFilingCabinet1 = vtk.vtkPolyDataMapper()
mapFilingCabinet1.SetInputConnection(FilingCabinet1.GetOutputPort())
mapFilingCabinet1.ScalarVisibilityOff()
FilingCabinet1Actor = vtk.vtkActor()
FilingCabinet1Actor.SetMapper(mapFilingCabinet1)
FilingCabinet1Actor.GetProperty().SetColor(
colors.GetColor3d("FilingCabinet"))
FilingCabinet2 = vtk.vtkStructuredGridGeometryFilter()
FilingCabinet2.SetInputData(reader.GetStructuredGridOutput())
FilingCabinet2.SetExtent(15, 15, 10, 12, 0, 8)
mapFilingCabinet2 = vtk.vtkPolyDataMapper()
mapFilingCabinet2.SetInputConnection(FilingCabinet2.GetOutputPort())
mapFilingCabinet2.ScalarVisibilityOff()
FilingCabinet2Actor = vtk.vtkActor()
FilingCabinet2Actor.SetMapper(mapFilingCabinet2)
FilingCabinet2Actor.GetProperty().SetColor(
colors.GetColor3d("FilingCabinet"))
bookshelf1Top = vtk.vtkStructuredGridGeometryFilter()
bookshelf1Top.SetInputData(reader.GetStructuredGridOutput())
bookshelf1Top.SetExtent(13, 13, 0, 4, 0, 11)
mapBookshelf1Top = vtk.vtkPolyDataMapper()
mapBookshelf1Top.SetInputConnection(bookshelf1Top.GetOutputPort())
mapBookshelf1Top.ScalarVisibilityOff()
bookshelf1TopActor = vtk.vtkActor()
bookshelf1TopActor.SetMapper(mapBookshelf1Top)
bookshelf1TopActor.GetProperty().SetColor(colors.GetColor3d("BookShelf"))
bookshelf1Bottom = vtk.vtkStructuredGridGeometryFilter()
bookshelf1Bottom.SetInputData(reader.GetStructuredGridOutput())
bookshelf1Bottom.SetExtent(20, 20, 0, 4, 0, 11)
mapBookshelf1Bottom = vtk.vtkPolyDataMapper()
mapBookshelf1Bottom.SetInputConnection(bookshelf1Bottom.GetOutputPort())
mapBookshelf1Bottom.ScalarVisibilityOff()
bookshelf1BottomActor = vtk.vtkActor()
bookshelf1BottomActor.SetMapper(mapBookshelf1Bottom)
bookshelf1BottomActor.GetProperty().SetColor(
colors.GetColor3d("BookShelf"))
bookshelf1Front = vtk.vtkStructuredGridGeometryFilter()
bookshelf1Front.SetInputData(reader.GetStructuredGridOutput())
bookshelf1Front.SetExtent(13, 20, 0, 0, 0, 11)
mapBookshelf1Front = vtk.vtkPolyDataMapper()
mapBookshelf1Front.SetInputConnection(bookshelf1Front.GetOutputPort())
mapBookshelf1Front.ScalarVisibilityOff()
bookshelf1FrontActor = vtk.vtkActor()
bookshelf1FrontActor.SetMapper(mapBookshelf1Front)
bookshelf1FrontActor.GetProperty().SetColor(colors.GetColor3d("BookShelf"))
bookshelf1Back = vtk.vtkStructuredGridGeometryFilter()
bookshelf1Back.SetInputData(reader.GetStructuredGridOutput())
bookshelf1Back.SetExtent(13, 20, 4, 4, 0, 11)
mapBookshelf1Back = vtk.vtkPolyDataMapper()
mapBookshelf1Back.SetInputConnection(bookshelf1Back.GetOutputPort())
mapBookshelf1Back.ScalarVisibilityOff()
bookshelf1BackActor = vtk.vtkActor()
bookshelf1BackActor.SetMapper(mapBookshelf1Back)
bookshelf1BackActor.GetProperty().SetColor(colors.GetColor3d("BookShelf"))
bookshelf1LHS = vtk.vtkStructuredGridGeometryFilter()
bookshelf1LHS.SetInputData(reader.GetStructuredGridOutput())
bookshelf1LHS.SetExtent(13, 20, 0, 4, 0, 0)
mapBookshelf1LHS = vtk.vtkPolyDataMapper()
mapBookshelf1LHS.SetInputConnection(bookshelf1LHS.GetOutputPort())
mapBookshelf1LHS.ScalarVisibilityOff()
bookshelf1LHSActor = vtk.vtkActor()
bookshelf1LHSActor.SetMapper(mapBookshelf1LHS)
bookshelf1LHSActor.GetProperty().SetColor(colors.GetColor3d("BookShelf"))
bookshelf1RHS = vtk.vtkStructuredGridGeometryFilter()
bookshelf1RHS.SetInputData(reader.GetStructuredGridOutput())
bookshelf1RHS.SetExtent(13, 20, 0, 4, 11, 11)
mapBookshelf1RHS = vtk.vtkPolyDataMapper()
mapBookshelf1RHS.SetInputConnection(bookshelf1RHS.GetOutputPort())
mapBookshelf1RHS.ScalarVisibilityOff()
bookshelf1RHSActor = vtk.vtkActor()
bookshelf1RHSActor.SetMapper(mapBookshelf1RHS)
bookshelf1RHSActor.GetProperty().SetColor(colors.GetColor3d("BookShelf"))
bookshelf2Top = vtk.vtkStructuredGridGeometryFilter()
bookshelf2Top.SetInputData(reader.GetStructuredGridOutput())
bookshelf2Top.SetExtent(13, 13, 15, 19, 0, 11)
mapBookshelf2Top = vtk.vtkPolyDataMapper()
mapBookshelf2Top.SetInputConnection(bookshelf2Top.GetOutputPort())
mapBookshelf2Top.ScalarVisibilityOff()
bookshelf2TopActor = vtk.vtkActor()
bookshelf2TopActor.SetMapper(mapBookshelf2Top)
bookshelf2TopActor.GetProperty().SetColor(colors.GetColor3d("BookShelf"))
bookshelf2Bottom = vtk.vtkStructuredGridGeometryFilter()
bookshelf2Bottom.SetInputData(reader.GetStructuredGridOutput())
bookshelf2Bottom.SetExtent(20, 20, 15, 19, 0, 11)
mapBookshelf2Bottom = vtk.vtkPolyDataMapper()
mapBookshelf2Bottom.SetInputConnection(bookshelf2Bottom.GetOutputPort())
mapBookshelf2Bottom.ScalarVisibilityOff()
bookshelf2BottomActor = vtk.vtkActor()
bookshelf2BottomActor.SetMapper(mapBookshelf2Bottom)
bookshelf2BottomActor.GetProperty().SetColor(
colors.GetColor3d("BookShelf"))
bookshelf2Front = vtk.vtkStructuredGridGeometryFilter()
bookshelf2Front.SetInputData(reader.GetStructuredGridOutput())
bookshelf2Front.SetExtent(13, 20, 15, 15, 0, 11)
mapBookshelf2Front = vtk.vtkPolyDataMapper()
mapBookshelf2Front.SetInputConnection(bookshelf2Front.GetOutputPort())
mapBookshelf2Front.ScalarVisibilityOff()
bookshelf2FrontActor = vtk.vtkActor()
bookshelf2FrontActor.SetMapper(mapBookshelf2Front)
bookshelf2FrontActor.GetProperty().SetColor(colors.GetColor3d("BookShelf"))
bookshelf2Back = vtk.vtkStructuredGridGeometryFilter()
bookshelf2Back.SetInputData(reader.GetStructuredGridOutput())
bookshelf2Back.SetExtent(13, 20, 19, 19, 0, 11)
mapBookshelf2Back = vtk.vtkPolyDataMapper()
mapBookshelf2Back.SetInputConnection(bookshelf2Back.GetOutputPort())
mapBookshelf2Back.ScalarVisibilityOff()
bookshelf2BackActor = vtk.vtkActor()
bookshelf2BackActor.SetMapper(mapBookshelf2Back)
bookshelf2BackActor.GetProperty().SetColor(colors.GetColor3d("BookShelf"))
bookshelf2LHS = vtk.vtkStructuredGridGeometryFilter()
bookshelf2LHS.SetInputData(reader.GetStructuredGridOutput())
bookshelf2LHS.SetExtent(13, 20, 15, 19, 0, 0)
mapBookshelf2LHS = vtk.vtkPolyDataMapper()
mapBookshelf2LHS.SetInputConnection(bookshelf2LHS.GetOutputPort())
mapBookshelf2LHS.ScalarVisibilityOff()
bookshelf2LHSActor = vtk.vtkActor()
bookshelf2LHSActor.SetMapper(mapBookshelf2LHS)
bookshelf2LHSActor.GetProperty().SetColor(colors.GetColor3d("BookShelf"))
bookshelf2RHS = vtk.vtkStructuredGridGeometryFilter()
bookshelf2RHS.SetInputData(reader.GetStructuredGridOutput())
bookshelf2RHS.SetExtent(13, 20, 15, 19, 11, 11)
mapBookshelf2RHS = vtk.vtkPolyDataMapper()
mapBookshelf2RHS.SetInputConnection(bookshelf2RHS.GetOutputPort())
mapBookshelf2RHS.ScalarVisibilityOff()
bookshelf2RHSActor = vtk.vtkActor()
bookshelf2RHSActor.SetMapper(mapBookshelf2RHS)
bookshelf2RHSActor.GetProperty().SetColor(colors.GetColor3d("BookShelf"))
window = vtk.vtkStructuredGridGeometryFilter()
window.SetInputData(reader.GetStructuredGridOutput())
window.SetExtent(20, 20, 6, 13, 10, 13)
mapWindow = vtk.vtkPolyDataMapper()
mapWindow.SetInputConnection(window.GetOutputPort())
mapWindow.ScalarVisibilityOff()
windowActor = vtk.vtkActor()
windowActor.SetMapper(mapWindow)
windowActor.GetProperty().SetColor(colors.GetColor3d("WindowColor"))
outlet = vtk.vtkStructuredGridGeometryFilter()
outlet.SetInputData(reader.GetStructuredGridOutput())
outlet.SetExtent(0, 0, 9, 10, 14, 16)
mapOutlet = vtk.vtkPolyDataMapper()
mapOutlet.SetInputConnection(outlet.GetOutputPort())
mapOutlet.ScalarVisibilityOff()
outletActor = vtk.vtkActor()
outletActor.SetMapper(mapOutlet)
outletActor.GetProperty().SetColor(colors.GetColor3d("lamp_black"))
inlet = vtk.vtkStructuredGridGeometryFilter()
inlet.SetInputData(reader.GetStructuredGridOutput())
inlet.SetExtent(0, 0, 9, 10, 0, 6)
mapInlet = vtk.vtkPolyDataMapper()
mapInlet.SetInputConnection(inlet.GetOutputPort())
mapInlet.ScalarVisibilityOff()
inletActor = vtk.vtkActor()
inletActor.SetMapper(mapInlet)
inletActor.GetProperty().SetColor(colors.GetColor3d("lamp_black"))
outline = vtk.vtkStructuredGridOutlineFilter()
outline.SetInputData(reader.GetStructuredGridOutput())
mapOutline = vtk.vtkPolyDataMapper()
mapOutline.SetInputConnection(outline.GetOutputPort())
outlineActor = vtk.vtkActor()
outlineActor.SetMapper(mapOutline)
outlineActor.GetProperty().SetColor(colors.GetColor3d("Black"))
# Create the source for the streamtubes.
seeds = vtk.vtkPointSource()
seeds.SetRadius(0.075)
seeds.SetCenter(seedCenters[center])
seeds.SetNumberOfPoints(25)
streamers = vtk.vtkStreamTracer()
streamers.SetInputConnection(reader.GetOutputPort())
streamers.SetSourceConnection(seeds.GetOutputPort())
streamers.SetMaximumPropagation(500)
streamers.SetMinimumIntegrationStep(0.1)
streamers.SetMaximumIntegrationStep(1.0)
streamers.SetInitialIntegrationStep(0.2)
streamers.Update()
mapStreamers = vtk.vtkPolyDataMapper()
mapStreamers.SetInputConnection(streamers.GetOutputPort())
mapStreamers.SetScalarRange(
reader.GetOutput().GetPointData().GetScalars().GetRange())
streamersActor = vtk.vtkActor()
streamersActor.SetMapper(mapStreamers)
# Create the rendering window, renderer, and interactive renderer.
ren = vtk.vtkRenderer()
renWin = vtk.vtkRenderWindow()
renWin.AddRenderer(ren)
iren = vtk.vtkRenderWindowInteractor()
iren.SetRenderWindow(renWin)
# Add the remaining actors to the renderer, set the background and size.
ren.AddActor(table1Actor)
ren.AddActor(table2Actor)
ren.AddActor(FilingCabinet1Actor)
ren.AddActor(FilingCabinet2Actor)
ren.AddActor(bookshelf1TopActor)
ren.AddActor(bookshelf1BottomActor)
ren.AddActor(bookshelf1FrontActor)
ren.AddActor(bookshelf1BackActor)
ren.AddActor(bookshelf1LHSActor)
ren.AddActor(bookshelf1RHSActor)
ren.AddActor(bookshelf2TopActor)
ren.AddActor(bookshelf2BottomActor)
ren.AddActor(bookshelf2FrontActor)
ren.AddActor(bookshelf2BackActor)
ren.AddActor(bookshelf2LHSActor)
ren.AddActor(bookshelf2RHSActor)
ren.AddActor(windowActor)
ren.AddActor(outletActor)
ren.AddActor(inletActor)
ren.AddActor(outlineActor)
ren.AddActor(streamersActor)
ren.SetBackground(colors.GetColor3d("SlateGray"))
aCamera = vtk.vtkCamera()
aCamera.SetClippingRange(0.726079, 36.3039)
aCamera.SetFocalPoint(2.43584, 2.15046, 1.11104)
aCamera.SetPosition(-4.76183, -10.4426, 3.17203)
aCamera.ComputeViewPlaneNormal()
aCamera.SetViewUp(0.0511273, 0.132773, 0.989827)
aCamera.SetViewAngle(18.604)
aCamera.Zoom(1.2)
ren.SetActiveCamera(aCamera)
renWin.SetSize(640, 400)
iren.Initialize()
iren.Start()
def points2():
output = pointSource2.GetPolyDataOutput()
points2 = vtk.vtkPoints()
output.SetPoints(points2)
for i in range(nPoints):
x, y, z = 1.5, (.5 + random.randint(y2[0],y2[1])), (.5 + random.randint(z2[0],z2[1]))
points2.InsertNextPoint(x, y, z)
pointSource1.SetExecuteMethod(points1)
pointSource2.SetExecuteMethod(points2)
#Streamlines for point source 1
integ = vtk.vtkRungeKutta45()
streamer1 = vtk.vtkStreamTracer()
streamer1.SetInputConnection(reader.GetOutputPort())
streamer1.SetSourceConnection(pointSource1.GetOutputPort())
streamer1.SetMaximumPropagation(2000)
streamer1.SetIntegrationStepUnit(2) #Cell length unit
streamer1.SetMinimumIntegrationStep(0.01)
streamer1.SetMaximumIntegrationStep(10)
streamer1.SetInitialIntegrationStep(0.2)
streamer1.SetIntegrationDirection(0)
streamer1.SetIntegrator(integ)
streamer1.SetRotationScale(0.5)
#Streamlines for point source 2
streamer2 = vtk.vtkStreamTracer()
streamer2.SetInputConnection(reader.GetOutputPort())
streamer2.SetSourceConnection(pointSource2.GetOutputPort())
def requestData():
self = container.Filter
inpt = self.GetInputDataObject(0, 0)
pt = vtk.vtkPointSource()
pt.SetNumberOfPoints(1)
pt.SetCenter(29.,29.,0.)
pt.SetRadius(0.)
st = vtk.vtkStreamTracer()
st.SetInputArrayToProcess(0, 0, 0, vtk.vtkDataObject.FIELD_ASSOCIATION_POINTS, 'velocity')
st.SetSourceConnection(pt.GetOutputPort())
st.SetInputData(inpt)
#Specify the maximum length of a streamline expressed in LENGTH_UNIT.
st.SetMaximumPropagation(5000)
st.SetMaximumNumberOfSteps(100) #bifurcation @ 100 steps
st.SetInitialIntegrationStep(0.5)
st.SetMinimumIntegrationStep(0.5)
st.SetMaximumIntegrationStep(1.0)
st.SetIntegratorTypeToRungeKutta45()
st.SetIntegrationDirectionToBackward()#Forward()
st.Update()
sline = st.GetOutput().NewInstance()
sline.ShallowCopy(st.GetOutput())
container.Streamlines.append(sline)
req = self.GetCurrentRequest()
if container.Count == 0:
req.Set(vtk.vtkStreamingDemandDrivenPipeline.CONTINUE_EXECUTING(), 1)
elif container.Count == container.MaxIterations - 1:
container.Count = 0
req.Remove(vtk.vtkStreamingDemandDrivenPipeline.CONTINUE_EXECUTING())
append = vtk.vtkAppendPolyData()
comp1_array = vtk.vtkDoubleArray()
comp1_array.SetNumberOfComponents(1)
comp2_array = vtk.vtkDoubleArray()
comp2_array.SetNumberOfComponents(1)
for line in container.Streamlines:
append.AddInputData(line)
tpt = line.GetPoint(line.GetNumberOfPoints()-1)
comp1_array.SetName( 'x' )
comp1_array.InsertNextValue(tpt[0])
comp2_array.SetName( 'y' )
comp2_array.InsertNextValue(tpt[1])
append.Update()
calcPCA(comp1_array, comp2_array)
print 'writing'
w = vtk.vtkPolyDataWriter()
w.SetInputConnection(append.GetOutputPort())
w.SetFileName("spaghetti.vtk")
w.Write()
return
container.Count += 1
attrib = vtk.vtkAssignAttribute()
attrib.SetInputConnection(grad.GetOutputPort())
attrib.Assign(vtk.vtkDataSetAttributes.SCALARS,
vtk.vtkDataSetAttributes.VECTORS,
vtk.vtkAssignAttribute.POINT_DATA)
center = potential_cation.GetOutput().GetPoint(0)
seeds = vtk.vtkPointSource()
seeds.SetRadius(3.0)
seeds.SetCenter(center)
seeds.SetNumberOfPoints(150)
integ = vtk.vtkRungeKutta4()
stream = vtk.vtkStreamTracer()
stream.SetInputConnection(attrib.GetOutputPort())
stream.SetSourceConnection(seeds.GetOutputPort())
stream.SetMaximumPropagation(500)
#stream.SetStepLength(0.5)
stream.SetInitialIntegrationStep(0.05)
stream.SetIntegrationDirectionToBackward()
stream.SetIntegrator(integ)
streamMapper = vtk.vtkPolyDataMapper()
streamMapper.SetInputConnection(stream.GetOutputPort())
streamActor = vtk.vtkActor()
streamActor.SetMapper(streamMapper)
renderer = vtk.vtkRenderer()
def _plotInternal(self):
"""Overrides baseclass implementation."""
# Preserve time and z axis for plotting these inof in rendertemplate
projection = vcs.elements["projection"][self._gm.projection]
taxis = self._originalData1.getTime()
if self._originalData1.ndim > 2:
zaxis = self._originalData1.getAxis(-3)
else:
zaxis = None
# Streamline color
if (not self._gm.coloredbyvector):
ln_tmp = self._gm.linetype
if ln_tmp is None:
ln_tmp = "default"
try:
ln_tmp = vcs.getline(ln_tmp)
lwidth = ln_tmp.width[0] # noqa
lcolor = ln_tmp.color[0]
lstyle = ln_tmp.type[0] # noqa
except Exception:
lstyle = "solid" # noqa
lwidth = 1. # noqa
lcolor = [0., 0., 0., 100.]
if self._gm.linewidth is not None:
lwidth = self._gm.linewidth # noqa
if self._gm.linecolor is not None:
lcolor = self._gm.linecolor
self._vtkPolyDataFilter.Update()
polydata = self._vtkPolyDataFilter.GetOutput()
dataLength = polydata.GetLength()
if (not self._gm.evenlyspaced):
# generate random seeds in a circle centered in the center of
# the bounding box for the data.
# by default vtkPointSource uses a global random source in vtkMath which is
# seeded only once. It makes more sense to seed a random sequence each time you draw
# the streamline plot.
pointSequence = vtk.vtkMinimalStandardRandomSequence()
pointSequence.SetSeedOnly(1177) # replicate the seed from vtkMath
seed = vtk.vtkPointSource()
seed.SetNumberOfPoints(self._gm.numberofseeds)
seed.SetCenter(polydata.GetCenter())
seed.SetRadius(dataLength / 2.0)
seed.SetRandomSequence(pointSequence)
seed.Update()
seedData = seed.GetOutput()
# project all points to Z = 0 plane
points = seedData.GetPoints()
for i in range(0, points.GetNumberOfPoints()):
p = list(points.GetPoint(i))
p[2] = 0
points.SetPoint(i, p)
if (self._gm.integratortype == 0):
integrator = vtk.vtkRungeKutta2()
elif (self._gm.integratortype == 1):
integrator = vtk.vtkRungeKutta4()
else:
if (self._gm.evenlyspaced):
warnings.warn(
"You cannot use RungeKutta45 for evenly spaced streamlines."
"Using RungeKutta4 instead")
integrator = vtk.vtkRungeKutta4()
else:
integrator = vtk.vtkRungeKutta45()
if (self._gm.evenlyspaced):
streamer = vtk.vtkEvenlySpacedStreamlines2D()
streamer.SetStartPosition(self._gm.startseed)
streamer.SetSeparatingDistance(self._gm.separatingdistance)
streamer.SetSeparatingDistanceRatio(
self._gm.separatingdistanceratio)
streamer.SetClosedLoopMaximumDistance(
self._gm.closedloopmaximumdistance)
else:
# integrate streamlines on normalized vector so that
# IntegrationTime stores distance
streamer = vtk.vtkStreamTracer()
streamer.SetSourceData(seedData)
streamer.SetIntegrationDirection(self._gm.integrationdirection)
streamer.SetMinimumIntegrationStep(self._gm.minimumsteplength)
streamer.SetMaximumIntegrationStep(self._gm.maximumsteplength)
streamer.SetMaximumError(self._gm.maximumerror)
streamer.SetMaximumPropagation(dataLength *
self._gm.maximumstreamlinelength)
streamer.SetInputData(polydata)
streamer.SetInputArrayToProcess(0, 0, 0, 0, "vector")
streamer.SetIntegrationStepUnit(self._gm.integrationstepunit)
streamer.SetInitialIntegrationStep(self._gm.initialsteplength)
streamer.SetMaximumNumberOfSteps(self._gm.maximumsteps)
streamer.SetTerminalSpeed(self._gm.terminalspeed)
streamer.SetIntegrator(integrator)
# add arc_length to streamlines
arcLengthFilter = vtk.vtkAppendArcLength()
arcLengthFilter.SetInputConnection(streamer.GetOutputPort())
arcLengthFilter.Update()
streamlines = arcLengthFilter.GetOutput()
# glyph seed points
contour = vtk.vtkContourFilter()
contour.SetInputConnection(arcLengthFilter.GetOutputPort())
contour.SetValue(0, 0.001)
if (streamlines.GetNumberOfPoints()):
r = streamlines.GetPointData().GetArray("arc_length").GetRange()
numberofglyphsoneside = self._gm.numberofglyphs // 2
for i in range(1, numberofglyphsoneside):
contour.SetValue(i, r[1] / numberofglyphsoneside * i)
else:
warnings.warn(
"No streamlines created. "
"The 'startseed' parameter needs to be inside the domain and "
"not over masked data.")
contour.SetInputArrayToProcess(0, 0, 0, 0, "arc_length")
# arrow glyph source
glyph2DSource = vtk.vtkGlyphSource2D()
glyph2DSource.SetGlyphTypeToTriangle()
glyph2DSource.SetRotationAngle(-90)
glyph2DSource.SetFilled(self._gm.filledglyph)
# arrow glyph adjustment
transform = vtk.vtkTransform()
transform.Scale(1., self._gm.glyphbasefactor, 1.)
transformFilter = vtk.vtkTransformFilter()
transformFilter.SetInputConnection(glyph2DSource.GetOutputPort())
transformFilter.SetTransform(transform)
transformFilter.Update()
glyphLength = transformFilter.GetOutput().GetLength()
# drawing the glyphs at the seed points
glyph = vtk.vtkGlyph2D()
glyph.SetInputConnection(contour.GetOutputPort())
glyph.SetInputArrayToProcess(1, 0, 0, 0, "vector")
glyph.SetSourceData(transformFilter.GetOutput())
glyph.SetScaleModeToDataScalingOff()
glyph.SetScaleFactor(dataLength * self._gm.glyphscalefactor /
glyphLength)
glyph.SetColorModeToColorByVector()
glyphMapper = vtk.vtkPolyDataMapper()
glyphMapper.SetInputConnection(glyph.GetOutputPort())
glyphActor = vtk.vtkActor()
glyphActor.SetMapper(glyphMapper)
mapper = vtk.vtkPolyDataMapper()
mapper.SetInputConnection(streamer.GetOutputPort())
act = vtk.vtkActor()
act.SetMapper(mapper)
# color the streamlines and glyphs
cmap = self.getColorMap()
if (self._gm.coloredbyvector):
numLevels = len(self._contourLevels) - 1
while len(self._contourColors) < numLevels:
self._contourColors.append(self._contourColors[-1])
lut = vtk.vtkLookupTable()
lut.SetNumberOfTableValues(numLevels)
for i in range(numLevels):
r, g, b, a = self.getColorIndexOrRGBA(cmap,
self._contourColors[i])
lut.SetTableValue(i, r / 100., g / 100., b / 100., a / 100.)
lut.SetVectorModeToMagnitude()
if numpy.allclose(self._contourLevels[0], -1.e20):
lmn = self._vectorRange[0]
else:
lmn = self._contourLevels[0][0]
if numpy.allclose(self._contourLevels[-1], 1.e20):
lmx = self._vectorRange[1]
else:
lmx = self._contourLevels[-1][-1]
lut.SetRange(lmn, lmx)
mapper.ScalarVisibilityOn()
mapper.SetLookupTable(lut)
mapper.UseLookupTableScalarRangeOn()
mapper.SetScalarModeToUsePointFieldData()
mapper.SelectColorArray("vector")
glyphMapper.ScalarVisibilityOn()
glyphMapper.SetLookupTable(lut)
glyphMapper.UseLookupTableScalarRangeOn()
glyphMapper.SetScalarModeToUsePointFieldData()
glyphMapper.SelectColorArray("VectorMagnitude")
else:
mapper.ScalarVisibilityOff()
glyphMapper.ScalarVisibilityOff()
if isinstance(lcolor, (list, tuple)):
r, g, b, a = lcolor
else:
r, g, b, a = cmap.index[lcolor]
act.GetProperty().SetColor(r / 100., g / 100., b / 100.)
glyphActor.GetProperty().SetColor(r / 100., g / 100., b / 100.)
plotting_dataset_bounds = self.getPlottingBounds()
vp = self._resultDict.get('ratio_autot_viewport', [
self._template.data.x1, self._template.data.x2,
self._template.data.y1, self._template.data.y2
])
dataset_renderer, xScale, yScale = self._context().fitToViewport(
act,
vp,
wc=plotting_dataset_bounds,
geoBounds=self._vtkDataSetBoundsNoMask,
geo=self._vtkGeoTransform,
priority=self._template.data.priority,
create_renderer=True)
glyph_renderer, xScale, yScale = self._context().fitToViewport(
glyphActor,
vp,
wc=plotting_dataset_bounds,
geoBounds=self._vtkDataSetBoundsNoMask,
geo=self._vtkGeoTransform,
priority=self._template.data.priority,
create_renderer=False)
kwargs = {
'vtk_backend_grid': self._vtkDataSet,
'dataset_bounds': self._vtkDataSetBounds,
'plotting_dataset_bounds': plotting_dataset_bounds,
"vtk_dataset_bounds_no_mask": self._vtkDataSetBoundsNoMask,
'vtk_backend_geo': self._vtkGeoTransform
}
if ('ratio_autot_viewport' in self._resultDict):
kwargs["ratio_autot_viewport"] = vp
self._resultDict.update(self._context().renderTemplate(
self._template, self._data1, self._gm, taxis, zaxis, **kwargs))
if (self._gm.coloredbyvector):
self._resultDict.update(self._context().renderColorBar(
self._template, self._contourLevels, self._contourColors, None,
self.getColorMap()))
if self._context().canvas._continents is None:
self._useContinents = False
if self._useContinents:
continents_renderer, xScale, yScale = self._context(
).plotContinents(plotting_dataset_bounds, projection,
self._dataWrapModulo, vp,
self._template.data.priority, **kwargs)
self._resultDict["vtk_backend_actors"] = [[
act, plotting_dataset_bounds
]]
self._resultDict["vtk_backend_luts"] = [[None, None]]
plane.SetPoint1(xma, 0, 0)
plane.SetPoint2(0, 0, zma)
plane.SetXResolution(20)
plane.SetYResolution(20)
# Add the outline of the plane
outline = vtk.vtkOutlineFilter()
outline.SetInputData(reader.GetOutput())
outlineMapper = vtk.vtkPolyDataMapper()
outlineMapper.SetInputConnection(outline.GetOutputPort())
outlineActor = vtk.vtkActor()
outlineActor.SetMapper(outlineMapper)
outlineActor.GetProperty().SetColor(1, 1, 1)
# Compute streamlines
streamline = vtk.vtkStreamTracer()
streamline.SetSourceConnection(plane.GetOutputPort())
streamline.SetInputConnection(reader.GetOutputPort())
# Try different integration alternatives! See the documentation of vtkStreamTracer
streamline.SetIntegrationDirectionToForward()
streamline.SetMaximumPropagation(5) # reader.GetDimensions(y)
streamline.SetComputeVorticity(True)
# Pass the streamlines to the mapper
streamlineMapper = vtk.vtkPolyDataMapper()
streamlineMapper.SetLookupTable(lut)
streamlineMapper.SetInputConnection(streamline.GetOutputPort())
streamlineMapper.SetScalarVisibility(True)
streamlineMapper.SetScalarModeToUsePointFieldData()
streamlineMapper.SelectColorArray('vectors')
# See documentation for the parameter in GetRange()
def main():
colors = vtk.vtkNamedColors()
xyxFile, qFile = get_program_parameters()
# Read the data.
#
pl3d = vtk.vtkMultiBlockPLOT3DReader()
pl3d.AutoDetectFormatOn()
pl3d.SetXYZFileName(xyxFile)
pl3d.SetQFileName(qFile)
pl3d.SetScalarFunctionNumber(153)
pl3d.SetVectorFunctionNumber(200)
pl3d.Update()
sg = pl3d.GetOutput().GetBlock(0)
# blue to red lut
#
lut = vtk.vtkLookupTable()
lut.SetHueRange(0.667, 0.0)
seeds = [[-0.74, 0.0, 0.3], [-0.74, 0.0, 1.0], [-0.74, 0.0, 2.0],
[-0.74, 0.0, 3.0]]
renderers = list()
for s in range(0, len(seeds)):
# computational planes
floorComp = vtk.vtkStructuredGridGeometryFilter()
floorComp.SetExtent(0, 37, 0, 75, 0, 0)
floorComp.SetInputData(sg)
floorComp.Update()
floorMapper = vtk.vtkPolyDataMapper()
floorMapper.SetInputConnection(floorComp.GetOutputPort())
floorMapper.ScalarVisibilityOff()
floorMapper.SetLookupTable(lut)
floorActor = vtk.vtkActor()
floorActor.SetMapper(floorMapper)
floorActor.GetProperty().SetRepresentationToWireframe()
floorActor.GetProperty().SetColor(colors.GetColor3d("Black"))
floorActor.GetProperty().SetLineWidth(2)
postComp = vtk.vtkStructuredGridGeometryFilter()
postComp.SetExtent(10, 10, 0, 75, 0, 37)
postComp.SetInputData(sg)
postMapper = vtk.vtkPolyDataMapper()
postMapper.SetInputConnection(postComp.GetOutputPort())
postMapper.SetLookupTable(lut)
postMapper.SetScalarRange(sg.GetScalarRange())
postActor = vtk.vtkActor()
postActor.SetMapper(postMapper)
postActor.GetProperty().SetColor(colors.GetColor3d("Black"))
# streamers
#
# spherical seed points
rake = vtk.vtkPointSource()
rake.SetCenter(seeds[s])
rake.SetNumberOfPoints(10)
streamers = vtk.vtkStreamTracer()
streamers.SetInputConnection(pl3d.GetOutputPort())
# streamers SetSource [rake GetOutput]
streamers.SetSourceConnection(rake.GetOutputPort())
streamers.SetMaximumPropagation(250)
streamers.SetInitialIntegrationStep(.2)
streamers.SetMinimumIntegrationStep(.01)
streamers.SetIntegratorType(2)
streamers.Update()
tubes = vtk.vtkTubeFilter()
tubes.SetInputConnection(streamers.GetOutputPort())
tubes.SetNumberOfSides(8)
tubes.SetRadius(.08)
tubes.SetVaryRadius(0)
mapTubes = vtk.vtkPolyDataMapper()
mapTubes.SetInputConnection(tubes.GetOutputPort())
mapTubes.SetScalarRange(sg.GetScalarRange())
tubesActor = vtk.vtkActor()
tubesActor.SetMapper(mapTubes)
renderer = vtk.vtkRenderer()
renderer.AddActor(floorActor)
renderer.AddActor(postActor)
renderer.AddActor(tubesActor)
renderer.SetBackground(colors.GetColor3d("SlateGray"))
renderers.append(renderer)
renderWindow = vtk.vtkRenderWindow()
# Setup viewports for the renderers
rendererSize = 256
xGridDimensions = 2
yGridDimensions = 2
renderWindow.SetSize(rendererSize * xGridDimensions,
rendererSize * yGridDimensions)
for row in range(0, yGridDimensions):
for col in range(xGridDimensions):
index = row * xGridDimensions + col
# (xmin, ymin, xmax, ymax)
viewport = [
float(col) / xGridDimensions,
float(yGridDimensions - (row + 1)) / yGridDimensions,
float(col + 1) / xGridDimensions,
float(yGridDimensions - row) / yGridDimensions
]
renderers[index].SetViewport(viewport)
camera = vtk.vtkCamera()
camera.SetFocalPoint(0.918037, -0.0779233, 2.69513)
camera.SetPosition(0.840735, -23.6176, 8.50211)
camera.SetViewUp(0.00227904, 0.239501, 0.970893)
camera.SetClippingRange(1, 100)
renderers[0].SetActiveCamera(camera)
for r in range(0, len(renderers)):
renderWindow.AddRenderer(renderers[r])
if r > 0:
renderers[r].SetActiveCamera(camera)
interactor = vtk.vtkRenderWindowInteractor()
interactor.SetRenderWindow(renderWindow)
renderWindow.SetSize(512, 512)
renderWindow.Render()
interactor.Start()
mapInlet.SetInputConnection(inlet.GetOutputPort()) mapInlet.ScalarVisibilityOff() inletActor = vtk.vtkActor() inletActor.SetMapper(mapInlet) inletActor.GetProperty().SetColor(0, 0, 0) outline = vtk.vtkStructuredGridOutlineFilter() outline.SetInputConnection(reader.GetOutputPort()) mapOutline = vtk.vtkPolyDataMapper() mapOutline.SetInputConnection(outline.GetOutputPort()) outlineActor = vtk.vtkActor() outlineActor.SetMapper(mapOutline) outlineActor.GetProperty().SetColor(0, 0, 0) # Create source for streamtubes streamer = vtk.vtkStreamTracer() streamer.SetInputConnection(reader.GetOutputPort()) streamer.SetStartPosition(0.1, 2.1, 0.5) streamer.SetMaximumPropagation(500) streamer.SetInitialIntegrationStep(0.2) streamer.SetIntegrationDirectionToForward() cone = vtk.vtkConeSource() cone.SetResolution(8) cones = vtk.vtkGlyph3D() cones.SetInputConnection(streamer.GetOutputPort()) cones.SetSourceConnection(cone.GetOutputPort()) cones.SetScaleFactor(0.5) cones.SetInputArrayToProcess(1, 0, 0, vtk.vtkDataObject.FIELD_ASSOCIATION_POINTS, "vectors") cones.SetScaleModeToScaleByVector()
def main():
fileName = r"carotid.vtk"
colors = vtk.vtkNamedColors()
ren1 = vtk.vtkRenderer()
renWin = vtk.vtkRenderWindow()
renWin.AddRenderer(ren1)
iren = vtk.vtkRenderWindowInteractor()
iren.SetRenderWindow(renWin)
# Create the pipeline.
reader = vtk.vtkStructuredPointsReader()
reader.SetFileName(fileName)
psource = vtk.vtkPointSource()
psource.SetNumberOfPoints(25)
psource.SetCenter(133.1, 116.3, 5.0)
psource.SetRadius(2.0)
threshold = vtk.vtkThresholdPoints()
threshold.SetInputConnection(reader.GetOutputPort())
threshold.ThresholdByUpper(275)
streamers = vtk.vtkStreamTracer()
streamers.SetInputConnection(reader.GetOutputPort())
streamers.SetSourceConnection(psource.GetOutputPort())
streamers.SetMaximumPropagation(100.0)
streamers.SetInitialIntegrationStep(0.2)
streamers.SetTerminalSpeed(.01)
streamers.Update()
scalarRange = [0] * 2
scalarRange[0] = streamers.GetOutput().GetPointData().GetScalars(
).GetRange()[0]
scalarRange[1] = streamers.GetOutput().GetPointData().GetScalars(
).GetRange()[1]
tubes = vtk.vtkTubeFilter()
tubes.SetInputConnection(streamers.GetOutputPort())
tubes.SetRadius(0.3)
tubes.SetNumberOfSides(6)
tubes.SetVaryRadius(0)
lut = vtk.vtkLookupTable()
lut.SetHueRange(.667, 0.0)
lut.Build()
streamerMapper = vtk.vtkPolyDataMapper()
streamerMapper.SetInputConnection(tubes.GetOutputPort())
streamerMapper.SetScalarRange(scalarRange[0], scalarRange[1])
streamerMapper.SetLookupTable(lut)
streamerActor = vtk.vtkActor()
streamerActor.SetMapper(streamerMapper)
# Speed contours.
iso = vtk.vtkContourFilter()
iso.SetInputConnection(reader.GetOutputPort())
iso.SetValue(0, 175)
isoMapper = vtk.vtkPolyDataMapper()
isoMapper.SetInputConnection(iso.GetOutputPort())
isoMapper.ScalarVisibilityOff()
isoActor = vtk.vtkActor()
isoActor.SetMapper(isoMapper)
isoActor.GetProperty().SetRepresentationToWireframe()
isoActor.GetProperty().SetOpacity(0.25)
# Outline
outline = vtk.vtkOutlineFilter()
outline.SetInputConnection(reader.GetOutputPort())
outlineMapper = vtk.vtkPolyDataMapper()
outlineMapper.SetInputConnection(outline.GetOutputPort())
outlineActor = vtk.vtkActor()
outlineActor.SetMapper(outlineMapper)
outlineActor.GetProperty().SetColor(0., 0., 0.)
# Add the actors to the renderer, set the background and size.
ren1.AddActor(outlineActor)
ren1.AddActor(streamerActor)
ren1.AddActor(isoActor)
ren1.SetBackground(1., 1., 1.)
renWin.SetSize(640, 480)
ren1.ResetCamera()
ren1.ResetCameraClippingRange()
# Render the image.
renWin.Render()
iren.Start()
# Now create streamlines from a rake of seed points
pt1 = [0.001,0.1,0.5]
pt2 = [0.001,0.9,0.5]
line = vtk.vtkLineSource()
line.SetResolution(numStreamlines-1)
line.SetPoint1(pt1)
line.SetPoint2(pt2)
line.Update()
rk4 = vtk.vtkRungeKutta4()
strategy = vtk.vtkClosestNPointsStrategy()
ivp = vtk.vtkInterpolatedVelocityField()
ivp.SetFindCellStrategy(strategy)
streamer = vtk.vtkStreamTracer()
streamer.SetInputConnection(append.GetOutputPort())
streamer.SetSourceConnection(line.GetOutputPort())
streamer.SetMaximumPropagation(10)
streamer.SetInitialIntegrationStep(.2)
streamer.SetIntegrationDirectionToForward()
streamer.SetMinimumIntegrationStep(0.01)
streamer.SetMaximumIntegrationStep(0.5)
streamer.SetTerminalSpeed(1.0e-12)
streamer.SetMaximumError(1.0e-06)
streamer.SetComputeVorticity(0)
streamer.SetIntegrator(rk4)
streamer.SetInterpolatorPrototype(ivp)
streamer.Update()
reasons = streamer.GetOutput().GetCellData().GetArray("ReasonForTermination")
print(reasons.GetValue(0))
def render_velocity(self):
self.ren.RemoveActor(self.velocity_actor)
if not self.config["velocity"][0]:
return
data_path = compose_file_name(self.base_dir, "/velocity",
self.data_folders["velocity"],
self.time_step)
reader = vtk.vtkXMLImageDataReader()
reader.SetFileName(data_path)
reader.Update()
rake = vtk.vtkLineSource()
cur_seeds = seeds[self.time_step - 1]
rake.SetPoint1(cur_seeds[0][0], cur_seeds[0][1], cur_seeds[0][2])
rake.SetPoint2(cur_seeds[1][0], cur_seeds[1][1], cur_seeds[1][2])
rake.SetResolution(1000)
integ = vtk.vtkRungeKutta45()
sl = vtk.vtkStreamTracer()
sl.SetInputData(reader.GetOutput())
sl.SetSourceConnection(rake.GetOutputPort())
sl.SetIntegrator(integ)
sl.SetMaximumPropagation(10000)
sl.SetInitialIntegrationStep(10)
sl.SetIntegrationDirectionToBoth()
transform = vtk.vtkTransform()
transform.Scale(1, 1, 30)
transform.Update()
transform_filter = vtk.vtkTransformFilter()
transform_filter.SetInputConnection(sl.GetOutputPort())
transform_filter.SetTransform(transform)
transform_filter.Update()
# the filter generates (only when multiple lines are input).
streamTube = vtk.vtkTubeFilter()
streamTube.SetInputConnection(transform_filter.GetOutputPort())
streamTube.SetInputArrayToProcess(
1, 0, 0, vtk.vtkDataObject.FIELD_ASSOCIATION_POINTS, "vectors")
streamTube.SetRadius(2)
streamTube.SetNumberOfSides(12)
streamTube.SetVaryRadiusToVaryRadiusByVector()
# streamTube.GetOutput().GetPointData().SetActiveScalars("Vorticity")
# myrange = reader.GetOutput().GetPointData().GetScalars().GetRange()
#
# color = vtk.vtkColorTransferFunction()
# color.AddRGBPoint(myrange[0], 0., 0., 1)
# color.AddRGBPoint(myrange[1], 1., 0., 0)
mapper = vtk.vtkPolyDataMapper()
mapper.SetInputConnection(streamTube.GetOutputPort())
# mapper.SetScalarRange(reader.GetOutput().GetPointData().GetScalars().GetRange())
# mapper.SetLookupTable(color)
actor = vtk.vtkActor()
actor.SetMapper(mapper)
actor.GetProperty().SetOpacity(0.3)
self.velocity_actor = actor
self.ren.AddActor(actor)
outline.SetInputData(pl3d_output) outlineMapper = vtk.vtkPolyDataMapper() outlineMapper.SetInputConnection(outline.GetOutputPort()) outlineActor = vtk.vtkActor() outlineActor.SetMapper(outlineMapper) seeds = vtk.vtkLineSource() seeds.SetPoint1(15, -5, 32) seeds.SetPoint2(15, 5, 32) seeds.SetResolution(10) integ = vtk.vtkRungeKutta4() sl = vtk.vtkStreamTracer() sl.SetIntegrator(integ) sl.SetInputData(pl3d_output) sl.SetSourceConnection(seeds.GetOutputPort()) sl.SetMaximumPropagation(100) sl.SetInitialIntegrationStep(0.1) sl.SetIntegrationDirectionToBackward() scalarSurface = vtk.vtkRuledSurfaceFilter () scalarSurface.SetInputConnection(sl.GetOutputPort()) scalarSurface.SetOffset(0) scalarSurface.SetOnRatio(2) scalarSurface.PassLinesOn() scalarSurface.SetRuledModeToPointWalk() scalarSurface.SetDistanceFactor(30)
def main():
fileName = get_program_parameters()
colors = vtk.vtkNamedColors()
ren1 = vtk.vtkRenderer()
renWin = vtk.vtkRenderWindow()
renWin.AddRenderer(ren1)
iren = vtk.vtkRenderWindowInteractor()
iren.SetRenderWindow(renWin)
# Create the pipeline.
#
reader = vtk.vtkStructuredPointsReader()
reader.SetFileName(fileName)
psource = vtk.vtkPointSource()
psource.SetNumberOfPoints(25)
psource.SetCenter(133.1, 116.3, 5.0)
psource.SetRadius(2.0)
threshold = vtk.vtkThresholdPoints()
threshold.SetInputConnection(reader.GetOutputPort())
threshold.ThresholdByUpper(275)
streamers = vtk.vtkStreamTracer()
streamers.SetInputConnection(reader.GetOutputPort())
streamers.SetSourceConnection(psource.GetOutputPort())
# streamers.SetMaximumPropagationUnitToTimeUnit()
streamers.SetMaximumPropagation(100.0)
# streamers.SetInitialIntegrationStepUnitToCellLengthUnit()
streamers.SetInitialIntegrationStep(0.2)
streamers.SetTerminalSpeed(.01)
streamers.Update()
scalarRange = [0] * 2
scalarRange[0] = streamers.GetOutput().GetPointData().GetScalars(
).GetRange()[0]
scalarRange[1] = streamers.GetOutput().GetPointData().GetScalars(
).GetRange()[1]
print("range: ", scalarRange[0], ", ", scalarRange[1])
tubes = vtk.vtkTubeFilter()
tubes.SetInputConnection(streamers.GetOutputPort())
tubes.SetRadius(0.3)
tubes.SetNumberOfSides(6)
tubes.SetVaryRadius(0)
lut = vtk.vtkLookupTable()
lut.SetHueRange(.667, 0.0)
lut.Build()
streamerMapper = vtk.vtkPolyDataMapper()
streamerMapper.SetInputConnection(tubes.GetOutputPort())
streamerMapper.SetScalarRange(scalarRange[0], scalarRange[1])
streamerMapper.SetLookupTable(lut)
streamerActor = vtk.vtkActor()
streamerActor.SetMapper(streamerMapper)
# Speed contours.
iso = vtk.vtkContourFilter()
iso.SetInputConnection(reader.GetOutputPort())
iso.SetValue(0, 175)
isoMapper = vtk.vtkPolyDataMapper()
isoMapper.SetInputConnection(iso.GetOutputPort())
isoMapper.ScalarVisibilityOff()
isoActor = vtk.vtkActor()
isoActor.SetMapper(isoMapper)
isoActor.GetProperty().SetRepresentationToWireframe()
isoActor.GetProperty().SetOpacity(0.25)
# Outline
outline = vtk.vtkOutlineFilter()
outline.SetInputConnection(reader.GetOutputPort())
outlineMapper = vtk.vtkPolyDataMapper()
outlineMapper.SetInputConnection(outline.GetOutputPort())
outlineActor = vtk.vtkActor()
outlineActor.SetMapper(outlineMapper)
outlineActor.GetProperty().SetColor(colors.GetColor3d("Black"))
# Add the actors to the renderer, set the background and size.
#
ren1.AddActor(outlineActor)
ren1.AddActor(streamerActor)
ren1.AddActor(isoActor)
ren1.SetBackground(colors.GetColor3d("Wheat"))
renWin.SetSize(640, 480)
cam1 = vtk.vtkCamera()
cam1.SetClippingRange(17.4043, 870.216)
cam1.SetFocalPoint(136.71, 104.025, 23)
cam1.SetPosition(204.747, 258.939, 63.7925)
cam1.SetViewUp(-0.102647, -0.210897, 0.972104)
cam1.Zoom(1.6)
ren1.SetActiveCamera(cam1)
# Render the image.
#
renWin.Render()
iren.Start()