def test_shortcuts(self):
protein('gGGGGG-PPPPP')
dna('ACGTRYSWKMBDHVN')
dna('t')
dna('actgta')
dna('acgtrysw-kmb-dhvn')
rna('ACUUUUU')
def test_shortcuts(self):
protein("gGGGGG-PPPPP")
dna("ACGTRYSWKMBDHVN")
dna("t")
dna("actgta")
dna("acgtrysw-kmb-dhvn")
rna("ACUUUUU")
def test_reverse_complement(self):
s = dna('GGGGaaaaaaaatttatatat')
rc = s.reverse_complement()
self.assertEqual(rc, dna('atatataaattttttttCCCC'))
self.assertEqual(
dna('ACGTRYSWKMBDHVN').reverse_complement(),
dna('NBDHVKMWSRYACGT'))
self.assertRaises(ValueError, protein('G').reverse_complement)
def test_reverse_complement(self):
s = dna("GGGGaaaaaaaatttatatat")
rc = s.reverse_complement()
self.assertEqual(rc, dna("atatataaattttttttCCCC"))
self.assertEqual(
dna("ACGTRYSWKMBDHVN").reverse_complement(),
dna("NBDHVKMWSRYACGT"))
self.assertRaises(ValueError, protein("G").reverse_complement)