recs_to_remove = ['n24', 'n27', 'n28']
annotator_array = ws.dload_annotator_names(db_name)
for ann_name in annotator_array:
print ann_name
if ann_name == "qrs":
annotation = ann_name
if ann_name == "atr":
annotation = ann_name
print("annotators for this database are: " + str(annotator_array) +
" we are choosing " + str(annotation))
initial_rec_array = ws.dload_rec_names(db_name)
wo_continuation_recs = ws.rmv_continuation_rec(initial_rec_array)
rec_name_array = ws.rmv_test_rec(wo_continuation_recs)
#rec_name_array=ws.rmv_even_rec(wo_continuation_recs)
print str(rec_name_array)
#############################################################################
#### list of features (per record) that we want to extract ######
# global_mean
# global_std_dev
# nn50
# pnn50
# sdsd
# window_1_std_dev
# .
# .
# .
annotation=ann_name;
elif ann_name == "qrs":
annotation=ann_name;
elif ann_name=='ecg':
annotation=ann_name;
# if db_name == 'afdb':
# annotation='atr'
print("annotators for this database are: " + str(annotator_array) + " we are choosing " + str(annotation))
initial_rec_array=ws.dload_rec_names(db_name);
wo_continuation_recs=ws.rmv_continuation_rec(initial_rec_array)
rec_name_array=ws.rmv_test_rec(wo_continuation_recs)
#rec_name_array=ws.rmv_even_rec(wo_continuation_recs)
print str(rec_name_array)
db_name="afpdb";
initial_rec_array=[];
rec_name_array=[];
annotator_array=[];
wo_continuation_recs=[]
recs_to_remove=['n24','n27','n28'];
annotator_array=ws.dload_annotator_names(db_name);
for ann_name in annotator_array:
print ann_name
if ann_name == "qrs":
annotation=ann_name;
if ann_name == "atr":
annotation=ann_name;
print("annotators for this database are: " + str(annotator_array) + " we are choosing " + str(annotation))
initial_rec_array=ws.dload_rec_names(db_name);
#wo_continuation_recs=ws.rmv_continuation_rec(initial_rec_array)
rec_name_array_temp=ws.rmv_test_rec(initial_rec_array)
#rec_name_array=ws.rmv_p_rec(rec_name_array_temp)
#rec_name_array=ws.rmv_even_rec(wo_continuation_recs)
rec_name_array=rec_name_array_temp
print str(rec_name_array)
#############################################################################
#############################################################################
#radius_array=[0.02,0.04,0.06,0.08,0.10,0.12,0.14,0.16,0.18,0.20,0.22,0.24,0.26,0.28,0.30,0.32,0.34,0.36,0.38, 0.40];
radius_array=[x / 1000.0 for x in range(0, 1020, 20)]
all_features=[]
annotation = ann_name
elif ann_name == "qrs":
annotation = ann_name
elif ann_name == "ecg":
annotation = ann_name
# if db_name == 'afdb':
# annotation='atr'
print ("annotators for this database are: " + str(annotator_array) + " we are choosing " + str(annotation))
initial_rec_array = ws.dload_rec_names(db_name)
wo_continuation_recs = ws.rmv_continuation_rec(initial_rec_array)
rec_name_array = ws.rmv_test_rec(wo_continuation_recs)
# rec_name_array=ws.rmv_even_rec(wo_continuation_recs)
print str(rec_name_array)
db_name = "afpdb"
initial_rec_array = []
rec_name_array = []
annotator_array = []
wo_continuation_recs = []
recs_to_remove = ["n24", "n27", "n28"]
annotator_array = ws.dload_annotator_names(db_name)
annotation=ann_name;
elif ann_name == "qrs":
annotation=ann_name;
elif ann_name=='ecg':
annotation=ann_name;
# if db_name == 'afdb':
# annotation='atr'
print("annotators for this database are: " + str(annotator_array) + " we are choosing " + str(annotation))
initial_rec_array=ws.dload_rec_names(db_name);
wo_continuation_recs=ws.rmv_continuation_rec(initial_rec_array)
rec_name_array=ws.rmv_test_rec(wo_continuation_recs)
#rec_name_array=ws.rmv_even_rec(wo_continuation_recs)
print str(rec_name_array)
#############################################################################
#dictionary to store indices of features
global_vocab_ecg={};
index_of_features_ecg=0;
all_features=[]
pwave_time_patient=[]# this is a list of list that will contain p wave values for all records