def test_setup_filebacked(tmpdir):
from yadage.state_providers.localposix import LocalFSProvider
from packtivity.statecontexts.posixfs_context import LocalFSState
import os
localprovider = LocalFSProvider(
LocalFSState(readwrite=[
os.path.join(str(tmpdir), 'rw_one'),
os.path.join(str(tmpdir), 'rw_two')
],
readonly=[
os.path.join(str(tmpdir), 'ro_one'),
os.path.join(str(tmpdir), 'ro_two')
]),
init_states=[
LocalFSState(readwrite=[
os.path.join(str(tmpdir), 'init_rw_one'),
os.path.join(str(tmpdir), 'init_rw_two')
],
readonly=[
os.path.join(str(tmpdir), 'init_ro_one'),
os.path.join(str(tmpdir), 'init_ro_two')
])
])
assert LocalFSProvider.fromJSON(localprovider.json(),
{}).json() == localprovider.json()
def test_setup_filebacked(tmpdir):
from yadage.state_providers.localposix import LocalFSProvider
from packtivity.statecontexts.posixfs_context import LocalFSState
import os
localprovider = LocalFSProvider(
LocalFSState(
readwrite = [
os.path.join(str(tmpdir),'rw_one'),
os.path.join(str(tmpdir),'rw_two')
],
readonly = [
os.path.join(str(tmpdir),'ro_one'),
os.path.join(str(tmpdir),'ro_two')
]
)
,
init_states = [
LocalFSState(
readwrite = [
os.path.join(str(tmpdir),'init_rw_one'),
os.path.join(str(tmpdir),'init_rw_two')
],
readonly = [
os.path.join(str(tmpdir),'init_ro_one'),
os.path.join(str(tmpdir),'init_ro_two')
]
)
]
)
assert LocalFSProvider.fromJSON(localprovider.json(),{}).json() == localprovider.json()
def test_applicable():
data = yadage.workflow_loader.workflow('workflow.yml',
'tests/testspecs/local-helloworld')
wflow = YadageWorkflow.createFromJSON(
data, LocalFSProvider(LocalFSState(['/workdir']), ensure=False))
wflow.view().init({'par': 'value'})
assert wflow.rules[-1].applicable(wflow) == True
def test_serialize_offsetstage():
data = yadage.workflow_loader.workflow("workflow.yml",
"tests/testspecs/nestedmapreduce")
wflow = YadageWorkflow.createFromJSON(
data, LocalFSProvider(LocalFSState(["/workdir"]), ensure=False))
wflow.view().init({"input": [1, 2, 3]})
for x in wflow.rules:
assert OffsetStage.fromJSON(x.json()).json() == x.json()
def test_getRule():
data = yadage.workflow_loader.workflow('workflow.yml','tests/testspecs/nestedmapreduce')
wflow = YadageWorkflow.createFromJSON(data,LocalFSProvider(LocalFSState(['/workdir']), ensure = False))
wflow.view().init({'input':[1,2,3]})
assert wflow.view().getRule(identifier = wflow.rules[0].identifier) == wflow.rules[0]
assert wflow.view().getRule(name = wflow.rules[0].rule.name, offset = '') == wflow.rules[0]
assert wflow.view().getRule(name = 'nonexistent') == None
def test_applicable():
data = yadage.workflow_loader.workflow(
"workflow.yml", "tests/testspecs/local-helloworld"
)
wflow = YadageWorkflow.createFromJSON(
data, LocalFSProvider(LocalFSState(["/workdir"]), ensure=False)
)
wflow.view().init({"par": "value"})
assert wflow.rules[-1].applicable(wflow) == True
def test_serialize_deserialize():
data = yadage.workflow_loader.workflow('workflow.yml',
'tests/testspecs/local-helloworld')
wflow = YadageWorkflow.createFromJSON(
data, LocalFSProvider(LocalFSState(['/workdir']), ensure=False))
wflow.view().init({'hello': 'world'})
assert wflow.rules[0].rule.json()
assert wflow.rules[1].rule.json()
assert JsonStage.fromJSON(
wflow.rules[0].rule.json()).json() == wflow.rules[0].rule.json()
def test_getRule():
data = yadage.workflow_loader.workflow("workflow.yml",
"tests/testspecs/nestedmapreduce")
wflow = YadageWorkflow.createFromJSON(
data, LocalFSProvider(LocalFSState(["/workdir"]), ensure=False))
wflow.view().init({"input": [1, 2, 3]})
assert wflow.view().getRule(
identifier=wflow.rules[0].identifier) == wflow.rules[0]
assert (wflow.view().getRule(name=wflow.rules[0].rule.name,
offset="") == wflow.rules[0])
assert wflow.view().getRule(name="nonexistent") == None
def test_init():
data = yadage.workflow_loader.workflow('workflow.yml','tests/testspecs/nestedmapreduce')
wflow = YadageWorkflow.createFromJSON(data,LocalFSProvider(LocalFSState(['/workdir']), ensure = False))
view = wflow.view()
nrules_before = len(wflow.rules)
view.init({'hello':'world'})
nrules_after = len(wflow.rules)
assert nrules_before + 1 == nrules_after
view.rules[-1].apply(wflow)
matches = view.query('init',view.steps)
assert len(matches) == 1
def test_serialize_deserialize():
data = yadage.workflow_loader.workflow(
"workflow.yml", "tests/testspecs/local-helloworld"
)
wflow = YadageWorkflow.createFromJSON(
data, LocalFSProvider(LocalFSState(["/workdir"]), ensure=False)
)
wflow.view().init({"hello": "world"})
assert wflow.rules[0].rule.json()
assert wflow.rules[1].rule.json()
assert (
JsonStage.fromJSON(wflow.rules[0].rule.json()).json()
== wflow.rules[0].rule.json()
)
def test_init():
data = yadage.workflow_loader.workflow("workflow.yml",
"tests/testspecs/nestedmapreduce")
wflow = YadageWorkflow.createFromJSON(
data, LocalFSProvider(LocalFSState(["/workdir"]), ensure=False))
view = wflow.view()
nrules_before = len(wflow.rules)
view.init({"hello": "world"})
nrules_after = len(wflow.rules)
assert nrules_before + 1 == nrules_after
view.rules[-1].apply(wflow)
matches = view.query("init", view.steps)
assert len(matches) == 1
def localfs_state_provider(tmpdir):
return LocalFSProvider(LocalFSState([tmpdir.dirname]), ensure=True)