import CompuCellSetup sim, simthread = CompuCellSetup.getCoreSimulationObjects() # add extra attributes here CompuCellSetup.initializeSimulationObjects(sim, simthread) # Definitions of additional Python-managed fields go here pyAttributeAdder, dictAdder = CompuCellSetup.attachDictionaryToCells(sim) #Add Python steppables here steppableRegistry = CompuCellSetup.getSteppableRegistry() OrientedGrowthPlugin = CompuCell.getOrientedGrowthPlugin() from cancol2Steppables import CellLayoutSteppable cellLayoutSteppable = CellLayoutSteppable(sim, _frequency=1) steppableRegistry.registerSteppable(cellLayoutSteppable) from cancol2Steppables import VolumeParamSteppable volumeParamSteppable = VolumeParamSteppable(sim, _frequency=1) steppableRegistry.registerSteppable(volumeParamSteppable) from cancol2Steppables import MatrixDegradation MDSteppable = MatrixDegradation(sim, _frequency=1) steppableRegistry.registerSteppable(MDSteppable) from cancol2Steppables import MitosisSteppable mitosisSteppable = MitosisSteppable(sim, _frequency=1)
import sys
from os import environ
from os import getcwd
import string
sys.path.append(environ["PYTHON_MODULE_PATH"])
import CompuCellSetup
sim,simthread = CompuCellSetup.getCoreSimulationObjects()
CompuCellSetup.initializeSimulationObjects(sim,simthread)
#Add Python steppables here
steppableRegistry=CompuCellSetup.getSteppableRegistry()
import CompuCell
OrientedGrowthPlugin = CompuCell.getOrientedGrowthPlugin()
from OrientedGrowthDemoSteppables import GrowthSteppable
GrowthSteppableInstance=GrowthSteppable(sim,_frequency=10)
steppableRegistry.registerSteppable(GrowthSteppableInstance)
from OrientedGrowthDemoSteppables import OrientedConstraintSteppable
OrientedConstraintSteppableInstance=OrientedConstraintSteppable(sim,_frequency=1,_OGPlugin=OrientedGrowthPlugin)
steppableRegistry.registerSteppable(OrientedConstraintSteppableInstance)
CompuCellSetup.mainLoop(sim,simthread,steppableRegistry)
