def fill_upload_pdb_Frame(self):
"""Fill Frame with neccessary widgets"""
# -Create Widgets-
if platform.system() == 'Darwin':
self.upload_pdb_upload_Button = tk.Button(
self.upload_pdb_Frame,
text='Select Structure File',
command=self.open_pdb_filedialog,
highlightbackground='#FFF')
else:
self.upload_pdb_upload_Button = ctk.Button(
self.upload_pdb_Frame,
text='Select Structure File',
command=self.open_pdb_filedialog,
style='Path.TButton',
)
self.upload_pdb_path_Label = ctk.Label(
self.upload_pdb_Frame,
textvariable=self.pdbFilePath_var,
style='Path.TLabel',
font=9)
# Bind geometry change of this widget to updating the wraplength
self.upload_pdb_path_Label.bind('<Configure>', self.update_wraplengths)
# -Place Widgets-
self.upload_pdb_upload_Button.place(**self.UPLOAD_BUTTON)
self.upload_pdb_path_Label.place(**self.UPLOAD_LABEL)
def fill_upload_Frame(self):
"""Fill Frame with neccessary widgets"""
# -Create Widgets-
# Title
self.upload_title_Label = ctk.Label(self.upload_Frame,
text='Upload Files',
font=20,
style='Title.TLabel')
# Frames
self.upload_pdb_Frame = tk.Frame(self.upload_Frame)
self.fill_upload_pdb_Frame()
self.upload_csv_Frame = tk.Frame(self.upload_Frame)
self.fill_upload_csv_Frame()
self.upload_chr_Frame = tk.Frame(self.upload_Frame)
self.fill_upload_chr_Frame()
# -Place Widgets-
# Title
self.upload_title_Label.place(x=0,
y=0,
width=0,
height=0,
relx=0,
rely=0,
relwidth=1,
relheight=0.25)
# Frames
self.upload_pdb_Frame.place(x=0,
y=0,
width=0,
height=0,
relx=0 / 3,
rely=0.25,
relwidth=1 / 3,
relheight=0.75)
self.upload_csv_Frame.place(x=0,
y=0,
width=0,
height=0,
relx=1 / 3,
rely=0.25,
relwidth=1 / 3,
relheight=0.75)
self.upload_chr_Frame.place(x=0,
y=0,
width=0,
height=0,
relx=2 / 3,
rely=0.25,
relwidth=1 / 3,
relheight=0.75)
def fill_upload_chr_Frame(self):
"""Fill Frame with neccessary widgets"""
# -Create Widgets-
if platform.system() == 'Darwin':
self.upload_chr_upload_Button = tk.Button(
self.upload_chr_Frame,
text='Select Chrome Driver',
command=self.open_chr_filedialog,
highlightbackground='#FFF')
else:
self.upload_chr_upload_Button = ctk.Button(
self.upload_chr_Frame,
text='Select Chrome Driver',
command=self.open_chr_filedialog,
style='Path.TButton',
)
self.upload_chr_path_Label = ctk.Label(
self.upload_chr_Frame,
textvariable=self.chrFilePath_var,
style='Path.TLabel',
font=9)
# -Place Widgets-
self.upload_chr_upload_Button.place(**self.UPLOAD_BUTTON)
self.upload_chr_path_Label.place(**self.UPLOAD_LABEL)
def fill_protein_Frame(self):
"""Fill Frame with neccessary widgets"""
# -Create Widgets-
# Title
self.protein_title_Label = ctk.Label(self.protein_Frame,
text='Structure Info',
font=20,
style='Title.TLabel')
# Protein Name
self.protein_name_Label = ctk.Label(self.protein_Frame,
text='Output File Name',
font=10,
style='Protein.TLabel')
self.protein_name_Entry = ctk.Entry(self.protein_Frame,
textvariable=self.proteinName_var,
font=13,
justify=tk.CENTER)
# Protein ID
self.protein_id_Label = ctk.Label(self.protein_Frame,
text='Chain ID of Residues',
font=10,
style='Protein.TLabel')
self.protein_id_Entry = ctk.Entry(
self.protein_Frame,
textvariable=self.wantedProteinId_var,
font=13,
justify=tk.CENTER)
# -Place Widgets-
# Title
self.protein_title_Label.place(x=0,
y=0,
width=0,
height=0,
relx=0,
rely=0,
relwidth=1,
relheight=0.25)
# Protein Name
self.protein_name_Label.place(x=20,
y=-5,
width=-40,
height=0,
relx=0,
rely=0.35,
relwidth=1,
relheight=0.1)
self.protein_name_Entry.place(x=20,
y=-5,
width=-40,
height=0,
relx=0,
rely=0.45,
relwidth=1,
relheight=0.15)
# Protein ID
self.protein_id_Label.place(x=20,
y=-5,
width=-40,
height=0,
relx=0,
rely=0.65,
relwidth=1,
relheight=0.1)
self.protein_id_Entry.place(x=20,
y=-5,
width=-40,
height=0,
relx=0,
rely=0.75,
relwidth=1,
relheight=0.15)
def fill_options_Frame(self):
"""Fill Frame with neccessary widgets"""
# -Create Widgets-
# Title
self.options_title_Label = ctk.Label(self.options_Frame,
text='Options',
font=20,
style='Title.TLabel')
# Interaction
self.options_interaction_Label = ctk.Label(
self.options_Frame,
text='Select Network Type',
font=12,
)
self.options_main_Radiobutton = ctk.Radiobutton(
self.options_Frame,
text='Chains Only',
font=11,
variable=self.interaction_var,
value='main',
style='Interaction.TRadiobutton')
self.options_detailed_Radiobutton = ctk.Radiobutton(
self.options_Frame,
text='Chains & Residues',
font=11,
variable=self.interaction_var,
value='detail',
style='Interaction.TRadiobutton')
# Edge List
self.options_edgeList_Label = ctk.Label(
self.options_Frame,
text='Select Edgelist Output',
font=12,
)
self.options_letter_Radiobutton = ctk.Radiobutton(
self.options_Frame,
text='Chain ID',
font=11,
variable=self.edgeList_var,
value='letter',
style='EdgeList.TRadiobutton')
self.options_name_Radiobutton = ctk.Radiobutton(
self.options_Frame,
text='Chain Name',
font=11,
variable=self.edgeList_var,
value='name',
style='EdgeList.TRadiobutton')
self.options_number_Radiobutton = ctk.Radiobutton(
self.options_Frame,
text='Network ID',
font=11,
variable=self.edgeList_var,
value='number',
style='EdgeList.TRadiobutton')
# plot network
self.options_n_plot_Label = ctk.Label(
self.options_Frame,
text='Select Network Layout',
font=12,
)
self.options_letter_Radiobutton = ctk.Radiobutton(
self.options_Frame,
text='Chain ID',
font=11,
variable=self.edgeList_var,
value='letter',
style='EdgeList.TRadiobutton')
self.options_name_Radiobutton = ctk.Radiobutton(
self.options_Frame,
text='Chain Name',
font=11,
variable=self.edgeList_var,
value='name',
style='EdgeList.TRadiobutton')
self.options_number_Radiobutton = ctk.Radiobutton(
self.options_Frame,
text='Node ID',
font=11,
variable=self.edgeList_var,
value='number',
style='EdgeList.TRadiobutton')
# -Place Widgets-
# Title
self.options_title_Label.place(x=0,
y=0,
width=0,
height=0,
relx=0,
rely=0,
relwidth=0.25,
relheight=1)
# Interaction
self.options_interaction_Label.place(x=0,
y=0,
width=0,
height=0,
relx=0.25,
rely=0,
relwidth=0.3,
relheight=0.5)
self.options_main_Radiobutton.place(x=0,
y=0,
width=0,
height=0,
relx=0.6,
rely=0,
relwidth=0.2,
relheight=0.5)
self.options_detailed_Radiobutton.place(x=0,
y=0,
width=0,
height=0,
relx=0.8,
rely=0,
relwidth=0.2,
relheight=0.5)
# Edge List
self.options_edgeList_Label.place(x=0,
y=0,
width=0,
height=0,
relx=0.25,
rely=0.5,
relwidth=0.3,
relheight=0.5)
self.options_letter_Radiobutton.place(x=0,
y=0,
width=0,
height=0,
relx=0.55,
rely=0.5,
relwidth=0.45 / 3,
relheight=0.5)
self.options_name_Radiobutton.place(x=0,
y=0,
width=0,
height=0,
relx=0.55 + 0.45 / 3,
rely=0.5,
relwidth=0.45 / 3,
relheight=0.5)
self.options_number_Radiobutton.place(x=0,
y=0,
width=0,
height=0,
relx=1 - 0.45 / 3,
rely=0.5,
relwidth=0.45 / 3,
relheight=0.5)
def create_widgets(self):
"""Create window widgets"""
# -Frames-
self.options_Frame = tk.Frame(self)
self.fill_options_Frame()
self.upload_Frame = tk.Frame(self)
self.fill_upload_Frame()
self.protein_Frame = tk.Frame(self)
self.fill_protein_Frame()
# -Logo-
self.logo_Label = tk.Label(self,
compound='center',
background=self.PRI_BG_COLOR,
image=self.logo_img,
anchor=tk.CENTER)
self.logo_Label.image = self.logo_img
# -Buttons-
if platform.system() == 'Darwin':
self.run_Button = tk.Button(self,
text='Select Directory & Run',
font=17,
highlightbackground=self.PRI_BG_COLOR,
command=self.run)
self.analysis_Button = tk.Button(
self,
text='Network Analysis',
font=13,
highlightbackground=self.PRI_BG_COLOR,
command=self.network_analysis)
self.plot_Button = tk.Button(self,
text='Plot Network',
font=13,
highlightbackground=self.PRI_BG_COLOR,
command=self.plot_network)
else:
self.run_Button = ctk.Button(self,
text='Select Directory & Run',
font=17,
command=self.run)
self.analysis_Button = ctk.Button(self,
text='Network Analysis',
font=13,
command=self.network_analysis)
self.plot_Button = ctk.Button(self,
text='Plot Network',
font=13,
command=self.plot_network)
OptionList = [
'', 'circular', 'kamada_kawai', 'random', 'spectral', 'spring',
'shell'
]
if platform.system() == 'Darwin':
self.plot_options = tk.OptionMenu(self, self.layout_type,
*OptionList)
self.plot_options.configure(
background=self.PRI_BG_COLOR,
highlightbackground=self.PRI_BG_COLOR,
highlightcolor=self.PRI_BG_COLOR,
)
self.update_idletasks()
self.update()
else:
self.plot_options = ttk.OptionMenu(self, self.layout_type,
*OptionList)