def _draw_border(point_1, point_2, border_width, parent):
pen = QPen(QColor(self.border_color))
pen.setCosmetic(True)
pen.setWidth(border_width)
line = QGraphicsLineItem(QLineF(point_1, point_2), parent)
line.setPen(pen)
return line
def _draw_border(point_1, point_2, border_width, parent):
pen = QPen(QColor(self.border_color))
pen.setCosmetic(True)
pen.setWidth(border_width)
line = QGraphicsLineItem(QLineF(point_1, point_2), parent)
line.setPen(pen)
return line
def __init__(self, value: float, label: Tuple[str, float],
norm_value: float):
super().__init__()
color = QColor(*self.light_rgb)
self.value = value
self.norm_value = norm_value
self.setPath(self.get_path())
pen = QPen(color)
pen.setWidth(2)
self.setPen(pen)
value = np.abs(value)
self.value_item = item = QGraphicsSimpleTextItem(_str(value))
item.setToolTip(_str(value, 3))
font = item.font()
font.setPixelSize(11)
item.setFont(font)
width = item.boundingRect().width()
item.setX(StripeItem.WIDTH / 2 - width / 2)
item.setPen(color)
item.setBrush(color)
self.label_item = QGraphicsSimpleTextItem(
f"{label[0]} = {_str(label[1])}")
self.label_item.setToolTip(f"{label[0]} = {_str(label[1], 3)}")
self.label_item.setX(StripeItem.WIDTH + StripePlot.SPACING)
def make_pen(brush=Qt.black, width=1, style=Qt.SolidLine,
cap_style=Qt.SquareCap, join_style=Qt.BevelJoin,
cosmetic=False):
pen = QPen(brush)
pen.setWidth(width)
pen.setStyle(style)
pen.setCapStyle(cap_style)
pen.setJoinStyle(join_style)
pen.setCosmetic(cosmetic)
return pen
def show_pearson(rect, pearson, pen_width):
"""
Color the given rectangle according to its corresponding
standardized Pearson residual.
Args:
rect (QRect): the rectangle being drawn
pearson (float): signed standardized pearson residual
pen_width (int): pen width (bolder pen is used for selection)
"""
r = rect.rect()
x, y, w, h = r.x(), r.y(), r.width(), r.height()
if w == 0 or h == 0:
return
r = b = 255
if pearson > 0:
r = g = max(255 - 20 * pearson, 55)
elif pearson < 0:
b = g = max(255 + 20 * pearson, 55)
else:
r = g = b = 224
rect.setBrush(QBrush(QColor(r, g, b)))
pen_color = QColor(255 * (r == 255), 255 * (g == 255),
255 * (b == 255))
pen = QPen(pen_color, pen_width)
rect.setPen(pen)
if pearson > 0:
pearson = min(pearson, 10)
dist = 20 - 1.6 * pearson
else:
pearson = max(pearson, -10)
dist = 20 - 8 * pearson
pen.setWidth(1)
def _offseted_line(ax, ay):
r = QGraphicsLineItem(x + ax, y + ay, x + (ax or w),
y + (ay or h))
self.canvas.addItem(r)
r.setPen(pen)
ax = dist
while ax < w:
_offseted_line(ax, 0)
ax += dist
ay = dist
while ay < h:
_offseted_line(0, ay)
ay += dist
def show_pearson(rect, pearson, pen_width):
"""
Color the given rectangle according to its corresponding
standardized Pearson residual.
Args:
rect (QRect): the rectangle being drawn
pearson (float): signed standardized pearson residual
pen_width (int): pen width (bolder pen is used for selection)
"""
r = rect.rect()
x, y, w, h = r.x(), r.y(), r.width(), r.height()
if w == 0 or h == 0:
return
r = b = 255
if pearson > 0:
r = g = max(255 - 20 * pearson, 55)
elif pearson < 0:
b = g = max(255 + 20 * pearson, 55)
else:
r = g = b = 224
rect.setBrush(QBrush(QColor(r, g, b)))
pen_color = QColor(255 * (r == 255), 255 * (g == 255),
255 * (b == 255))
pen = QPen(pen_color, pen_width)
rect.setPen(pen)
if pearson > 0:
pearson = min(pearson, 10)
dist = 20 - 1.6 * pearson
else:
pearson = max(pearson, -10)
dist = 20 - 8 * pearson
pen.setWidth(1)
def _offseted_line(ax, ay):
r = QGraphicsLineItem(x + ax, y + ay, x + (ax or w),
y + (ay or h))
self.canvas.addItem(r)
r.setPen(pen)
ax = dist
while ax < w:
_offseted_line(ax, 0)
ax += dist
ay = dist
while ay < h:
_offseted_line(0, ay)
ay += dist
def _change_pen(self):
pen = QPen(self._pen)
if self._in_subset and self._selected:
color = QColor(self._pen.color())
color.setAlpha(255)
pen.setWidth(4)
pen.setColor(color)
elif not self._in_subset and self._selected:
color = QColor(self._pen.color())
color.setAlpha(255)
pen.setColor(color)
elif self._in_subset and not self._selected:
pen.setWidth(4)
self.setPen(pen)
self.setSymbolPen(pen)
def paint(self, painter, option, widget=None):
# Override the default selected appearance
if self.isSelected():
option.state ^= QStyle.State_Selected
rect = self.rect()
# this must render before overlay due to order in which it's drawn
super().paint(painter, option, widget)
painter.save()
pen = QPen(QColor(Qt.black))
pen.setWidth(4)
pen.setJoinStyle(Qt.MiterJoin)
painter.setPen(pen)
painter.drawRect(rect.adjusted(2, 2, -2, -2))
painter.restore()
else:
super().paint(painter, option, widget)
def paint(self, painter, option, widget=None):
# Override the default selected appearance
if self.isSelected():
option.state ^= QStyle.State_Selected
rect = self.rect()
# this must render before overlay due to order in which it's drawn
super().paint(painter, option, widget)
painter.save()
pen = QPen(QColor(Qt.black))
pen.setWidth(4)
pen.setJoinStyle(Qt.MiterJoin)
painter.setPen(pen)
painter.drawRect(rect.adjusted(2, 2, -2, -2))
painter.restore()
else:
super().paint(painter, option, widget)
def show_average(self):
self.view_average_menu.setChecked(True)
self.set_pen_colors()
self.clear_graph()
self.viewtype = AVERAGE
if not self.data:
return
x = self.data_x
if self.data:
ysall = []
cinfo = []
selected_indices = np.full(self.data_size, False, dtype=bool)
selected_indices[list(self.selected_indices)] = True
dsplit = self._split_by_color_value(self.data)
for colorv, indices in dsplit.items():
for part in [None, "subset", "selection"]:
if part is None:
part_selection = indices
pen = self.pen_normal if np.any(
self.subset_indices) else self.pen_subset
elif part == "selection" and self.selection_type:
part_selection = indices & selected_indices
pen = self.pen_selected
elif part == "subset":
part_selection = indices & self.subset_indices
pen = self.pen_subset
if np.any(part_selection):
ys = self.data.X[part_selection]
std = np.nanstd(ys, axis=0)
mean = np.nanmean(ys, axis=0)
std = std[self.data_xsind]
mean = mean[self.data_xsind]
ysall.append(mean)
penc = QPen(pen[colorv])
penc.setWidth(3)
self.add_curve(x, mean, pen=penc)
self.add_fill_curve(x,
mean + std,
mean - std,
pen=penc)
cinfo.append((colorv, part, part_selection))
self.curves.append((x, np.array(ysall)))
self.multiple_curves_info = cinfo
self.curves_cont.update()
self.plot.vb.set_mode_panning()
def paint(self, p, opt, widget):
if self.xData is None or len(self.xData) == 0:
return
p.setRenderHint(p.Antialiasing, True)
p.setCompositionMode(p.CompositionMode_SourceOver)
if self.widths is None:
p.setPen(self.pen)
for x0, y0, x1, y1 in zip(self.xData[::2], self.yData[::2],
self.xData[1::2], self.yData[1::2]):
p.drawLine(QLineF(x0, y0, x1, y1))
else:
pen = QPen(self.pen)
for x0, y0, x1, y1, w in zip(self.xData[::2], self.yData[::2],
self.xData[1::2], self.yData[1::2],
self.widths):
pen.setWidth(w)
p.setPen(pen)
p.drawLine(QLineF(x0, y0, x1, y1))
def _change_pen(self):
pen = QPen(self._pen)
color = QColor(Qt.black) if self._selected and self.master.has_subset \
else QColor(self._pen.color())
if self._in_subset or self._selected:
width = LinePlotStyle.SELECTED_LINE_WIDTH
alpha = LinePlotStyle.SELECTED_LINE_ALPHA
else:
width = LinePlotStyle.UNSELECTED_LINE_WIDTH
alpha = LinePlotStyle.UNSELECTED_LINE_ALPHA_WITH_SELECTION \
if self.master.has_subset or self.master.has_selection else \
LinePlotStyle.UNSELECTED_LINE_ALPHA
pen.setWidth(width)
color.setAlpha(alpha)
pen.setColor(color)
self.setPen(pen)
def __init__(self, parent):
super().__init__(parent)
self.__range = None # type: Tuple[float]
self.__value_range = None # type: Tuple[float]
self.__model_output = None # type: float
self.__base_value = None # type: float
self.__group = QGraphicsItemGroup(self)
low_color, high_color = QColor(*RGB_LOW), QColor(*RGB_HIGH)
self.__low_item = QGraphicsRectItem()
self.__low_item.setPen(QPen(low_color))
self.__low_item.setBrush(QBrush(low_color))
self.__high_item = QGraphicsRectItem()
self.__high_item.setPen(QPen(high_color))
self.__high_item.setBrush(QBrush(high_color))
self.__low_cover_item = LowCoverItem()
self.__high_cover_item = HighCoverItem()
pen = QPen(IndicatorItem.COLOR)
pen.setStyle(Qt.DashLine)
pen.setWidth(1)
self.__model_output_line = QGraphicsLineItem()
self.__model_output_line.setPen(pen)
self.__base_value_line = QGraphicsLineItem()
self.__base_value_line.setPen(pen)
self.__model_output_ind = IndicatorItem("Model prediction: {}")
self.__base_value_ind = IndicatorItem("Base value: {}\nThe average "
"prediction for selected class.")
self.__group.addToGroup(self.__low_item)
self.__group.addToGroup(self.__high_item)
self.__group.addToGroup(self.__low_cover_item)
self.__group.addToGroup(self.__high_cover_item)
self.__group.addToGroup(self.__model_output_line)
self.__group.addToGroup(self.__base_value_line)
self.__group.addToGroup(self.__model_output_ind)
self.__group.addToGroup(self.__base_value_ind)
self.__low_parts = [] # type: List[LowPartItem]
self.__high_parts = [] # type: List[HighPartItem]
def _change_pen(self):
pen = QPen(self._pen)
if self._in_subset and self._selected:
color = QColor(self._pen.color())
color.setAlpha(255)
pen.setWidth(4)
pen.setColor(color)
elif not self._in_subset and self._selected:
color = QColor(self._pen.color())
color.setAlpha(255)
pen.setColor(color)
elif self._in_subset and not self._selected:
color = QColor(self._pen.color())
color.setAlpha(LinePlotColors.LIGHT_ALPHA)
pen.setWidth(4)
pen.setColor(color)
else:
color = QColor(self._pen.color())
color.setAlpha(LinePlotColors.LIGHT_ALPHA)
pen.setColor(color)
self.setPen(pen)
def update_pen(pen,
brush=None,
width=None,
style=None,
cap_style=None,
join_style=None,
cosmetic=None):
pen = QPen(pen)
if brush is not None:
pen.setBrush(QBrush(brush))
if width is not None:
pen.setWidth(width)
if style is not None:
pen.setStyle(style)
if cap_style is not None:
pen.setCapStyle(cap_style)
if join_style is not None:
pen.setJoinStyle(join_style)
if cosmetic is not None:
pen.setCosmetic(cosmetic)
return pen
def show_average(self):
if not self.data:
return
self.viewtype = AVERAGE
self.clear_graph()
x = self.data_x
if self.data:
ysall = []
subset_indices = [i for i, id in enumerate(self.data.ids) if id in self.subset_ids]
dsplit = self._split_by_color_value(self.data)
for colorv, indices in dsplit.items():
for part in ["everything", "subset", "selection"]:
if part == "everything":
ys = self.data_ys[indices]
pen = self.pen_normal if subset_indices else self.pen_subset
elif part == "selection" and self.selection_type:
current_selected = sorted(set(self.selected_indices) & set(indices))
if not current_selected:
continue
ys = self.data_ys[current_selected]
pen = self.pen_selected
elif part == "subset":
current_subset = sorted(set(subset_indices) & set(indices))
if not current_subset:
continue
ys = self.data_ys[current_subset]
pen = self.pen_subset
std = np.std(ys, axis=0)
mean = np.mean(ys, axis=0)
ysall.append(mean)
penc = QPen(pen[colorv])
penc.setWidth(3)
self.add_curve(x, mean, pen=penc)
self.add_fill_curve(x, mean + std, mean - std, pen=penc)
self.curves.append((x, np.array(ysall)))
self.curves_cont.update()
def hoverLeaveEvent(self, event):
pen = QPen(self.pen())
pen.setWidth(2)
self.setPen(pen)
return RugItem.hoverLeaveEvent(self, event)
def replot_experiments(self):
"""Replot the whole quality plot.
"""
self.scene.clear()
labels = []
max_dist = numpy.nanmax(list(filter(None, self.distances)))
rug_widgets = []
group_pen = QPen(Qt.black)
group_pen.setWidth(2)
group_pen.setCapStyle(Qt.RoundCap)
background_pen = QPen(QColor(0, 0, 250, 150))
background_pen.setWidth(1)
background_pen.setCapStyle(Qt.RoundCap)
main_widget = QGraphicsWidget()
layout = QGraphicsGridLayout()
attributes = self.data.domain.attributes
if self.data is not None:
for (group, indices), dist_vec in zip(self.groups, self.distances):
indices_set = set(indices)
rug_items = []
if dist_vec is not None:
for i, attr in enumerate(attributes):
# Is this a within group distance or background
in_group = i in indices_set
if in_group:
rug_item = ClickableRugItem(dist_vec[i] / max_dist,
1.0, self.on_rug_item_clicked)
rug_item.setPen(group_pen)
tooltip = experiment_description(attr)
rug_item.setToolTip(tooltip)
rug_item.group_index = indices.index(i)
rug_item.setZValue(rug_item.zValue() + 1)
else:
rug_item = ClickableRugItem(dist_vec[i] / max_dist,
0.85, self.on_rug_item_clicked)
rug_item.setPen(background_pen)
tooltip = experiment_description(attr)
rug_item.setToolTip(tooltip)
rug_item.group = group
rug_item.index = i
rug_item.in_group = in_group
rug_items.append(rug_item)
rug_widget = RugGraphicsWidget(parent=main_widget)
rug_widget.set_rug(rug_items)
rug_widgets.append(rug_widget)
label = group_label(self.selected_split_by_labels(), group)
label_item = QGraphicsSimpleTextItem(label, main_widget)
label_item = GraphicsSimpleTextLayoutItem(label_item, parent=layout)
label_item.setSizePolicy(QSizePolicy.Fixed, QSizePolicy.Fixed)
labels.append(label_item)
for i, (label, rug_w) in enumerate(zip(labels, rug_widgets)):
layout.addItem(label, i, 0, Qt.AlignVCenter)
layout.addItem(rug_w, i, 1)
layout.setRowMaximumHeight(i, 30)
main_widget.setLayout(layout)
self.scene.addItem(main_widget)
self.main_widget = main_widget
self.rug_widgets = rug_widgets
self.labels = labels
self.on_view_resize(self.scene_view.size())
def _setup_plot(self):
"""Setup the plot with new curve data."""
assert self.data is not None
data, domain = self.data, self.data.domain
if is_discrete(domain.class_var):
class_col_data, _ = data.get_column_view(domain.class_var)
group_indices = [
np.flatnonzero(class_col_data == i)
for i in range(len(domain.class_var.values))
]
else:
group_indices = [np.arange(len(data))]
X = np.arange(1, len(domain.attributes) + 1)
groups = []
for i, indices in enumerate(group_indices):
if self.classes:
color = self.class_colors[i]
else:
color = QColor(Qt.darkGray)
group_data = data[indices, :]
plot_x, plot_y, connect = disconnected_curve_data(group_data.X,
x=X)
color.setAlpha(200)
lightcolor = QColor(color.lighter(factor=150))
lightcolor.setAlpha(150)
pen = QPen(color, 2)
pen.setCosmetic(True)
lightpen = QPen(lightcolor, 1)
lightpen.setCosmetic(True)
hoverpen = QPen(pen)
hoverpen.setWidth(2)
curve = pg.PlotCurveItem(
x=plot_x,
y=plot_y,
connect=connect,
pen=lightpen,
symbolSize=2,
antialias=True,
)
self.graph.addItem(curve)
hovercurves = []
for index, profile in zip(indices, group_data.X):
hcurve = HoverCurve(x=X,
y=profile,
pen=hoverpen,
antialias=True)
hcurve.setToolTip('{}'.format(index))
hcurve._data_index = index
hovercurves.append(hcurve)
self.graph.addItem(hcurve)
mean = np.nanmean(group_data.X, axis=0)
meancurve = pg.PlotDataItem(x=X,
y=mean,
pen=pen,
size=5,
symbol="o",
pxMode=True,
symbolSize=5,
antialias=True)
hoverpen = QPen(hoverpen)
hoverpen.setWidth(5)
hc = HoverCurve(x=X, y=mean, pen=hoverpen, antialias=True)
hc.setFlag(QGraphicsItem.ItemIsSelectable, False)
self.graph.addItem(hc)
self.graph.addItem(meancurve)
self.legend_items.append(meancurve)
q1, q2, q3 = np.nanpercentile(group_data.X, [25, 50, 75], axis=0)
# TODO: implement and use a box plot item
errorbar = pg.ErrorBarItem(x=X,
y=mean,
bottom=np.clip(mean - q1, 0, mean - q1),
top=np.clip(q3 - mean, 0, q3 - mean),
beam=0.5)
self.graph.addItem(errorbar)
groups.append(
namespace(data=group_data,
indices=indices,
profiles=curve,
hovercurves=hovercurves,
mean=meancurve,
boxplot=errorbar))
self.__groups = groups
self.__update_visibility()
self.__update_tooltips()
def _setup_plot(self):
"""Setup the plot with new curve data."""
assert self.data is not None
data, domain = self.data, self.data.domain
if is_discrete(domain.class_var):
class_col_data, _ = data.get_column_view(domain.class_var)
group_indices = [np.flatnonzero(class_col_data == i)
for i in range(len(domain.class_var.values))]
else:
group_indices = [np.arange(len(data))]
X = np.arange(1, len(domain.attributes)+1)
groups = []
for i, indices in enumerate(group_indices):
if self.classes:
color = self.class_colors[i]
else:
color = QColor(Qt.darkGray)
group_data = data[indices, :]
plot_x, plot_y, connect = disconnected_curve_data(group_data.X, x=X)
color.setAlpha(200)
lightcolor = QColor(color.lighter(factor=150))
lightcolor.setAlpha(150)
pen = QPen(color, 2)
pen.setCosmetic(True)
lightpen = QPen(lightcolor, 1)
lightpen.setCosmetic(True)
hoverpen = QPen(pen)
hoverpen.setWidth(2)
curve = pg.PlotCurveItem(
x=plot_x, y=plot_y, connect=connect,
pen=lightpen, symbolSize=2, antialias=True,
)
self.graph.addItem(curve)
hovercurves = []
for index, profile in zip(indices, group_data.X):
hcurve = HoverCurve(x=X, y=profile, pen=hoverpen,
antialias=True)
hcurve.setToolTip('{}'.format(index))
hcurve._data_index = index
hovercurves.append(hcurve)
self.graph.addItem(hcurve)
mean = np.nanmean(group_data.X, axis=0)
meancurve = pg.PlotDataItem(
x=X, y=mean, pen=pen, size=5, symbol="o", pxMode=True,
symbolSize=5, antialias=True
)
hoverpen = QPen(hoverpen)
hoverpen.setWidth(5)
hc = HoverCurve(x=X, y=mean, pen=hoverpen, antialias=True)
hc.setFlag(QGraphicsItem.ItemIsSelectable, False)
self.graph.addItem(hc)
self.graph.addItem(meancurve)
self.legend_items.append(meancurve)
q1, q2, q3 = np.nanpercentile(group_data.X, [25, 50, 75], axis=0)
# TODO: implement and use a box plot item
errorbar = pg.ErrorBarItem(
x=X, y=mean,
bottom=np.clip(mean - q1, 0, mean - q1),
top=np.clip(q3 - mean, 0, q3 - mean),
beam=0.5
)
self.graph.addItem(errorbar)
groups.append(
namespace(
data=group_data, indices=indices, profiles=curve,
hovercurves=hovercurves, mean=meancurve, boxplot=errorbar)
)
self.__groups = groups
self.__update_visibility()
self.__update_tooltips()
def paint(self, p, opt, widget):
def get_arrows():
# Compute (n, 4) array of coordinates of arrows' ends
# Arrows are at 15 degrees; length is 10, clipped to edge length
x0, y0, x1, y1 = edge_coords.T
arr_len = np.clip(lengths - sizes1 - w3, 0, 10)
cos12 = arr_len * np.cos(np.pi / 12)
sin12 = arr_len * np.sin(np.pi / 12)
# cos(a ± 15) = cos(a) cos(15) ∓ sin(a) sin(15)
tx = sins * (fx * sin12)
x1a = x1 - coss * (fx * cos12)
x2a = x1a - tx
x1a += tx
# sin(a ± 15) = sin(a) cos(15) ± sin(15) cos(a)
ty = (fy * sin12) * coss
y1a = y1 + sins * (fy * cos12)
y2a = y1a - ty
y1a += ty
return np.vstack((x1a, y1a, x2a, y2a)).T
def get_short_edge_coords():
# Compute the target-side coordinates of edges with arrows
# Such edges are shorted by 8 pixels + width / 3
off = 8 + w3
return edge_coords[:, 2:] + (off * np.vstack((-fxcos, fysin))).T
if self.xData is None or len(self.xData) == 0:
return
# Widths of edges, divided by 3; used for adjusting sizes
w3 = (self.widths if self.widths is not None else self.pen.width()) / 3
# Sizes of source and target nodes; they are used for adjusting the
# edge lengths, so we increase the sizes by edge widths / 3
sizes0, sizes1 = self.sizes[::2] + w3, self.sizes[1::2] + w3
# Coordinates of vertices for all end points (in real world)
x0s, x1s = self.xData[::2], self.xData[1::2]
y0s, y1s = self.yData[::2], self.yData[1::2]
# Factors for transforming real-worlds coordinates into pixels
fx = 1 / p.worldTransform().m11()
fy = 1 / p.worldTransform().m22()
# Computations of angles (lengths are also used to clip the arrows)
# We need sine and cosine of angles, and never the actual angles.
# Sine and cosine are compute as ratios in triangles rather than with
# trigonometric functions
diffx, diffy = (x1s - x0s) / fx, -(y1s - y0s) / fy
lengths = np.sqrt(diffx**2 + diffy**2)
arcs = lengths == 0
coss, sins = np.nan_to_num(diffx / lengths), np.nan_to_num(diffy /
lengths)
# A slower version of the above, with trigonometry
# angles = np.arctan2(-(y1s - y0s) / fy, (x1s - x0s) / fx)
# return np.cos(angles), np.sin(angles)
# Sin and cos are mostly used as mulitplied with fx and fy; precompute
fxcos, fysin = fx * coss, fy * sins
# Coordinates of edges' end points: coordinates of vertices, adjusted
# by sizes. When drawing arraws, the target coordinate is used for
# the tip of the arrow, not the edge
edge_coords = np.vstack((x0s + fxcos * sizes0, y0s - fysin * sizes0,
x1s - fxcos * sizes1, y1s + fysin * sizes1)).T
pen = QPen(self.pen)
p.setRenderHint(p.Antialiasing, True)
p.setCompositionMode(p.CompositionMode_SourceOver)
if self.widths is None:
p.setPen(pen)
if self.directed:
for (x0, y0, x1,
y1), (x1w,
y1w), (xa1, ya1, xa2,
ya2), arc in zip(edge_coords,
get_short_edge_coords(),
get_arrows(), arcs):
if not arc:
p.drawLine(QLineF(x0, y0, x1w, y1w))
p.drawLine(QLineF(xa1, ya1, x1, y1))
p.drawLine(QLineF(xa2, ya2, x1, y1))
else:
for ecoords in edge_coords[~arcs]:
p.drawLine(QLineF(*ecoords))
else:
if self.directed:
for (x0, y0, x1,
y1), (x1w,
y1w), (xa1, ya1, xa2,
ya2), w, arc in zip(edge_coords,
get_short_edge_coords(),
get_arrows(),
self.widths, arcs):
if not arc:
pen.setWidth(w)
p.setPen(pen)
p.drawLine(QLineF(x0, y0, x1w, y1w))
p.drawLine(QLineF(xa1, ya1, x1, y1))
p.drawLine(QLineF(xa2, ya2, x1, y1))
else:
for ecoords, w in zip(edge_coords[~arcs], self.widths[~arcs]):
pen.setWidth(w)
p.setPen(pen)
p.drawLine(QLineF(*ecoords))
# This part is not so optimized because there can't be that many loops
if np.any(arcs):
xs, ys = self.xData[::2][arcs], self.yData[1::2][arcs]
sizes = self.sizes[::2][arcs]
sizes += w3 if isinstance(w3, float) else w3[arcs]
# if radius of loop would be size, then distance betwween
# vertex and loop centers would be
# d = np.sqrt(size ** 2 - r ** 2 / 2) + r / np.sqrt(2) + r / 2
ds = sizes * (1 + np.sqrt(2) / 4)
rxs = xs - ds * fx
rys = ys - ds * fy
rfxs = sizes * fx
rfys = sizes * fy
ax0o = 6 * np.cos(np.pi * 5 / 6) * fx
ax1o = 6 * np.cos(np.pi * 7 / 12) * fx
ay0o = 6 * np.sin(np.pi * 5 / 6) * fy
ay1o = 6 * np.sin(np.pi * 7 / 12) * fy
if self.widths is None:
widths = np.full(len(rxs), pen.width())
else:
widths = self.widths[arcs]
for rx, ry, rfx, rfy, w in zip(rxs, rys, rfxs, rfys, widths):
rect = QRectF(rx, ry, rfx, rfy)
pen.setWidth(w)
p.setPen(pen)
p.drawArc(rect, 100 * 16, 250 * 16)
if self.directed:
rx += 1.1 * rfx
ry += rfy / 2
p.drawLine(QLineF(rx, ry, rx + ax0o, ry - ay0o))
p.drawLine(QLineF(rx, ry, rx + ax1o, ry - ay1o))
def paint(self, p, opt, widget):
def get_arrows():
cos12 = 10 * np.cos(np.pi / 12)
sin12 = 10 * np.sin(np.pi / 12)
# cos(a ± 12) = cos(a) cos(12) ∓ sin(a) sin(12)
tx = sins * (fx * sin12)
xa1s = x1s - coss * (fx * cos12)
xa2s = xa1s - tx
xa1s += tx
# sin(a ± 12) = sin(a) cos(12) ± sin(12) cos(a)
ty = (fy * sin12) * coss
ya1s = y1s + sins * (fy * cos12)
ya2s = ya1s - ty
ya1s += ty
return xa1s, ya1s, xa2s, ya2s
def get_angles():
angles = np.arctan2(-(y1s - y0s) / fy, (x1s - x0s) / fx)
return np.cos(angles), np.sin(angles)
"""
# This below faster. Uncomment and check that it works
diffx, diffy = (x1s - x0s) / fx, (y1s - y0s) / fy
norm = np.sqrt(diffx ** 2 + diffy ** 2)
self.coss = np.nan_to_num(diffx / norm)
self.sins = np.nan_to_num(diffy / norm)
"""
def shorter_edges():
nonlocal x0s, x1s, y0s, y1s
sizes0, sizes1 = self.sizes[::2], self.sizes[1::2]
return (x0s + fx * sizes0 * coss, y0s - fy * sizes0 * sins,
x1s - fx * sizes1 * coss, y1s + fy * sizes1 * sins)
if self.xData is None or len(self.xData) == 0:
return
x0s, x1s = self.xData[::2], self.xData[1::2]
y0s, y1s = self.yData[::2], self.yData[1::2]
fx = 1 / p.worldTransform().m11()
fy = 1 / p.worldTransform().m22()
coss, sins = get_angles()
endpoints = x0s, y0s, x1s, y1s = shorter_edges()
p.setRenderHint(p.Antialiasing, True)
p.setCompositionMode(p.CompositionMode_SourceOver)
if self.widths is None:
p.setPen(self.pen)
if self.directed:
for x0, y0, x1, y1, xa1, ya1, xa2, ya2 in zip(
*endpoints, *get_arrows()):
p.drawLine(QLineF(x0, y0, x1, y1))
p.drawLine(QLineF(xa1, ya1, x1, y1))
p.drawLine(QLineF(xa2, ya2, x1, y1))
else:
for x0, y0, x1, y1 in zip(*endpoints):
p.drawLine(QLineF(x0, y0, x1, y1))
else:
pen = QPen(self.pen)
if self.directed:
for x0, y0, x1, y1, xa1, ya1, xa2, ya2, w in zip(
*endpoints, *get_arrows(), self.widths):
pen.setWidth(w)
p.setPen(pen)
p.drawLine(QLineF(x0, y0, x1, y1))
p.drawLine(QLineF(xa1, ya1, x1, y1))
p.drawLine(QLineF(xa2, ya2, x1, y1))
else:
for x0, y0, x1, y1, w in zip(*endpoints, self.widths):
pen.setWidth(w)
p.setPen(pen)
p.drawLine(QLineF(x0, y0, x1, y1))