def test_files_worse_seq_created(self):
self.align = AlignAnalizer('Bb11001', False)
self.align.read_and_process_max_balibase()
r1 = os.path.isfile('/results/Worse_sp_value.txt')
r2 = os.path.isfile('/results/Worse_strike_value.txt')
r3 = os.path.isfile('/results/Worse_tc_value.txt')
self.assertEqual(r1, r2)
self.assertEqual(r3, r2)
def test_read_and_process_max_balibase_throw_error_wrong_file(self):
self.align = AlignAnalizer('BB1101', False)
with self.assertRaises(Exception):
self.align.read_and_process_max_balibase()
class TestMethods(unittest.TestCase):
# Check that gives an exception for a wrong name
def test_read_and_process_max_balibase_throw_error_wrong_file(self):
self.align = AlignAnalizer('BB1101', False)
with self.assertRaises(Exception):
self.align.read_and_process_max_balibase()
def test_read_and_process_min_balibase_throw_error_wrong_file(self):
self.align = AlignAnalizer('BB1101', False)
with self.assertRaises(Exception):
self.align.read_and_process_min_balibase()
# If there are both none, none is giving an exception
def test_lower_case_ID_max_ok(self):
self.align = AlignAnalizer('bb11001', False)
self.align1 = AlignAnalizer('BB11001', False)
res = self.align.read_and_process_max_balibase()
res1 = self.align.read_and_process_max_balibase()
self.assertEqual(res, res1)
def test_lower_case_ID_max_ok_1(self):
self.align = AlignAnalizer('BB11001', False)
self.align1 = AlignAnalizer('bB11001', False)
res = self.align.read_and_process_max_balibase()
res1 = self.align.read_and_process_max_balibase()
self.assertEqual(res, res1)
def test_lower_case_ID_max_ok_2(self):
self.align = AlignAnalizer('Bb11001', False)
self.align1 = AlignAnalizer('bB11001', False)
res = self.align.read_and_process_max_balibase()
res1 = self.align1.read_and_process_max_balibase()
self.assertEqual(res, res1)
def test_lower_case_ID_min_ok(self):
self.align = AlignAnalizer('bb11001', False)
self.align1 = AlignAnalizer('BB11001', False)
res = self.align.read_and_process_min_balibase()
res1 = self.align1.read_and_process_min_balibase()
self.assertEqual(res, res1)
def test_lower_case_ID_min_ok_1(self):
self.align = AlignAnalizer('BB11001', False)
self.align1 = AlignAnalizer('bB11001', False)
res = self.align.read_and_process_min_balibase()
res1 = self.align1.read_and_process_min_balibase()
self.assertEqual(res, res1)
def test_lower_case_ID_min_ok_2(self):
self.align = AlignAnalizer('Bb11001', False)
self.align1 = AlignAnalizer('bB11001', False)
res = self.align.read_and_process_min_balibase()
res1 = self.align.read_and_process_min_balibase()
self.assertEqual(res, res1)
#Finally we are going to check that the files are created correctly
def test_file_FUN_or_VAR_doesnt_exist_root(self):
self.align = AlignAnalizer('Bb11002', False)
with self.assertRaises(Exception):
self.align.read_and_process_max_balibase()
def test_files_best_seq_created(self):
self.align = AlignAnalizer('Bb11001', False)
self.align.read_and_process_max_balibase()
r1 = os.path.isfile('/results/Best_sp_seq.txt')
r2 = os.path.isfile('/results/Best_strike_seq.txt')
r3 = os.path.isfile('/results/Best_tc_seq.txt')
self.assertEqual(r1, r2)
self.assertEqual(r3, r2)
def test_files_best_value_created(self):
self.align = AlignAnalizer('Bb11001', False)
self.align.read_and_process_max_balibase()
r1 = os.path.isfile('/results/Best_sp_value.txt')
r2 = os.path.isfile('/results/Best_strike_value.txt')
r3 = os.path.isfile('/results/Best_tc_value.txt')
self.assertEqual(r1, r2)
self.assertEqual(r3, r2)
def test_files_worse_seq_created(self):
self.align = AlignAnalizer('Bb11001', False)
self.align.read_and_process_max_balibase()
r1 = os.path.isfile('/results/Worse_sp_seq.txt')
r2 = os.path.isfile('/results/Worse_strike_seq.txt')
r3 = os.path.isfile('/results/Worse_tc_seq.txt')
self.assertEqual(r1, r2)
self.assertEqual(r3, r2)
def test_files_worse_seq_created(self):
self.align = AlignAnalizer('Bb11001', False)
self.align.read_and_process_max_balibase()
r1 = os.path.isfile('/results/Worse_sp_value.txt')
r2 = os.path.isfile('/results/Worse_strike_value.txt')
r3 = os.path.isfile('/results/Worse_tc_value.txt')
self.assertEqual(r1, r2)
self.assertEqual(r3, r2)
def tearDown(self):
print("Test passed correctly")
def test_file_FUN_or_VAR_doesnt_exist_root(self):
self.align = AlignAnalizer('Bb11002', False)
with self.assertRaises(Exception):
self.align.read_and_process_max_balibase()
def test_lower_case_ID_min_ok_2(self):
self.align = AlignAnalizer('Bb11001', False)
self.align1 = AlignAnalizer('bB11001', False)
res = self.align.read_and_process_min_balibase()
res1 = self.align.read_and_process_min_balibase()
self.assertEqual(res, res1)