def _build(dump=True):
# Initiate Gating object
if dump:
db = connect('test')
db.drop_database('test')
global_init('test')
setup_with_dummy_data()
project = Project.objects(project_id='test').get()
gate = Gating(experiment=project.load_experiment('test_experiment_dummy'),
sample_id='dummy_test')
return gate
import sys
sys.path.append('/home/ross/CytoPy')
from CytoPy.data.project import Project
from CytoPy.data.panel import Panel
from CytoPy.data.mongo_setup import global_init
from mongoengine import connect
from mongoengine.errors import DoesNotExist
import unittest
db = connect('test')
db.drop_database('test')
global_init('test')
class TestProject(unittest.TestCase):
def test_Project(self):
test_panel = Panel(panel_name='test')
test_panel.save()
test_project = Project(project_id='test', owner='test')
test_project.add_experiment('test_experiment_aml', panel_name='test')
test_project.add_experiment('test_experiment_dummy', panel_name='test')
test_project.add_subject('test_subject', testing=True)
self.assertEqual(test_project.list_subjects(), ['test_subject'])
s = test_project.pull_subject('test_subject')
self.assertEqual(s.testing, True)
self.assertEqual(s.subject_id, 'test_subject')
self.assertEqual(test_project.list_fcs_experiments(), ['test_experiment_aml', 'test_experiment_dummy'])
test_project.save()
test_project.delete()