def test_PeptideBackBoneBondSelector_select_all(self):
"""
test PetideBackBone select: all bonds
"""
ppbbSel = PeptideBackBoneBondSelector()
ats = self.mol.allAtoms
bnds = ats.bonds[0]
resultBnds = ppbbSel.select(bnds)
#print 'all_ppbbbonds:len(resultBnds)=', len(resultBnds)
self.assertEqual(len(resultBnds) , 132)
def test_PeptideBackBoneBondSelector_select_none(self):
"""
test PetideBackBone select: no bonds
"""
ppbbSel = PeptideBackBoneBondSelector()
ats = self.mol.allAtoms[4:8]
bnds = ats.bonds[0]
resultBnds = ppbbSel.select(bnds)
#print 'no_ppbbbonds:len(resultBnds)=', len(resultBnds)
self.assertEqual(len(resultBnds) , 0)
def test_PeptideBackBoneBondSelector_select_all(self):
"""
test PetideBackBone select: all bonds
"""
ppbbSel = PeptideBackBoneBondSelector()
ats = self.mol.allAtoms
bnds = ats.bonds[0]
resultBnds = ppbbSel.select(bnds)
#print 'all_ppbbbonds:len(resultBnds)=', len(resultBnds)
self.assertEqual(len(resultBnds), 132)
def test_PeptideBackBoneBondSelector_select_none(self):
"""
test PetideBackBone select: no bonds
"""
ppbbSel = PeptideBackBoneBondSelector()
ats = self.mol.allAtoms[4:8]
bnds = ats.bonds[0]
resultBnds = ppbbSel.select(bnds)
#print 'no_ppbbbonds:len(resultBnds)=', len(resultBnds)
self.assertEqual(len(resultBnds), 0)
def test_PeptideBackBoneBondSelector_select_some(self):
"""
test PetideBackBone select: some bonds
"""
ppbbSel = PeptideBackBoneBondSelector()
ats = self.mol.allAtoms[:50]
bnds = ats.bonds[0]
resultBnds = ppbbSel.select(bnds)
#print 'some_ppbbbonds:len(resultBnds)=', len(resultBnds)
#self.assertEqual(len(resultBnds) , 22)
self.assertEqual(len(resultBnds) , 17)
def test_PeptideBackBoneBondSelector_select_some(self):
"""
test PetideBackBone select: some bonds
"""
ppbbSel = PeptideBackBoneBondSelector()
ats = self.mol.allAtoms[:50]
bnds = ats.bonds[0]
resultBnds = ppbbSel.select(bnds)
#print 'some_ppbbbonds:len(resultBnds)=', len(resultBnds)
#self.assertEqual(len(resultBnds) , 22)
self.assertEqual(len(resultBnds), 17)