def getOutputDataFromDNATableFile(self, _strFileName):
"""
"""
xsDataBestOutput = XSDataBestOutput()
strDnaTablesXML = self.readProcessFile(_strFileName)
xsDataDnaTables = dna_tables.parseString(strDnaTablesXML)
# Loop through all the tables and fill in the relevant parts of xsDataBestOutput
# SubWedges
xsTablesCollectionStrategy = EDUtilsTable.getTableListFromTables(xsDataDnaTables, "data_collection_strategy")
for xsTableCollectionStrategy in xsTablesCollectionStrategy:
xsDataBestCollectionPlan = XSDataBestCollectionPlan()
xsCollectionRunList = EDUtilsTable.getListsFromTable(xsTableCollectionStrategy, "collection_run")
for xsCollectionRunItemList in xsCollectionRunList:
xsDataCollectionRun = self.collectionRunItemListToCollectionRun(xsCollectionRunItemList)
xsDataBestCollectionPlan.addCollectionRun(xsDataCollectionRun)
# Strategy Summary
xsStrategySummaryItemList = EDUtilsTable.getListsFromTable(xsTableCollectionStrategy, "summary")
xsDataStrategySummary = self.strategySummaryItemListToStrategySummary(xsStrategySummaryItemList[0])
# Ranking Resolution
# Not part of strategySummaryItemListToStrategySummary method since it is in the general_form part
xsTableGeneralInform = EDUtilsTable.getTableFromTables(xsDataDnaTables, "general_inform")
xsRankingResolutionItemList = EDUtilsTable.getListsFromTable(xsTableGeneralInform, "ranking_resolution")
xsItemRankingResolution = EDUtilsTable.getItemFromList(xsRankingResolutionItemList[0], "dmin")
fRankingResolution = float(xsItemRankingResolution.getValueOf_())
xsDataStrategySummary.setRankingResolution(XSDataFloat(fRankingResolution))
xsDataBestCollectionPlan.setStrategySummary(xsDataStrategySummary)
# Satistics
xsTablesStatisticalPrediction = EDUtilsTable.getTableListFromTables(xsDataDnaTables, "statistical_prediction")
for xsTableStatisticalPrediction in xsTablesStatisticalPrediction:
if(xsTableStatisticalPrediction.getIndex() == xsTableCollectionStrategy.getIndex()):
xsResolutionBinList = EDUtilsTable.getListsFromTable(xsTableStatisticalPrediction, "resolution_bin")
xsDataStatisticalPrediction = XSDataBestStatisticalPrediction()
for xsResolutionBinItemList in xsResolutionBinList:
xsDataResolutionBin = self.resolutionBinItemListToResolutionBin(xsResolutionBinItemList)
xsDataStatisticalPrediction.addResolutionBin(xsDataResolutionBin)
xsDataBestCollectionPlan.setStatisticalPrediction(xsDataStatisticalPrediction)
xsDataBestOutput.addCollectionPlan(xsDataBestCollectionPlan)
return xsDataBestOutput
def testExecute(self):
self.run()
edPlugin = self.getPlugin()
strBestVersion = self.getPlugin().getStringVersion()
if strBestVersion.find("3.1.0") != -1:
self.setReferenceDataOutputFile(
os.path.join(self.getPluginTestsDataHome(),
"XSDataBestv10Output_reference.xml"))
elif strBestVersion.find("3.2.0") != -1:
self.setReferenceDataOutputFile(
os.path.join(self.getPluginTestsDataHome(),
"XSDataBestv10Output_reference_BESTv320.xml"))
# Checks the expected result
strExpectedOutput = self.readAndParseFile(
self.getReferenceDataOutputFile())
from XSDataBestv10 import XSDataBestOutput
xsDataOutputExpected = XSDataBestOutput.parseString(strExpectedOutput)
xsDataOutputObtained = edPlugin.getDataOutput()
EDAssert.equal(xsDataOutputExpected.marshal(),
xsDataOutputObtained.marshal())
def testExecute(self):
self.run()
edPlugin = self.getPlugin()
strBestVersion = self.getPlugin().getStringVersion()
if strBestVersion.find("3.1.0") != -1:
self.setReferenceDataOutputFile(
os.path.join(self.getPluginTestsDataHome(), "XSDataBestv10Output_reference.xml")
)
elif strBestVersion.find("3.2.0") != -1:
self.setReferenceDataOutputFile(
os.path.join(self.getPluginTestsDataHome(), "XSDataBestv10Output_reference_BESTv320.xml")
)
# Checks the expected result
strExpectedOutput = self.readAndParseFile(self.getReferenceDataOutputFile())
from XSDataBestv10 import XSDataBestOutput
xsDataOutputExpected = XSDataBestOutput.parseString(strExpectedOutput)
xsDataOutputObtained = edPlugin.getDataOutput()
EDAssert.equal(xsDataOutputExpected.marshal(), xsDataOutputObtained.marshal())
def getOutputDataFromDNATableFile(self, _strFileName):
"""
"""
xsDataBestOutput = XSDataBestOutput()
strDnaTablesXML = self.readProcessFile(_strFileName)
xsDataDnaTables = dna_tables.parseString(strDnaTablesXML)
# Loop through all the tables and fill in the relevant parts of xsDataBestOutput
# SubWedges
xsTablesCollectionStrategy = EDUtilsTable.getTableListFromTables(
xsDataDnaTables, "data_collection_strategy")
for xsTableCollectionStrategy in xsTablesCollectionStrategy:
xsDataBestCollectionPlan = XSDataBestCollectionPlan()
xsCollectionRunList = EDUtilsTable.getListsFromTable(
xsTableCollectionStrategy, "collection_run")
for xsCollectionRunItemList in xsCollectionRunList:
xsDataCollectionRun = self.collectionRunItemListToCollectionRun(
xsCollectionRunItemList)
xsDataBestCollectionPlan.addCollectionRun(xsDataCollectionRun)
# Strategy Summary
xsStrategySummaryItemList = EDUtilsTable.getListsFromTable(
xsTableCollectionStrategy, "summary")
xsDataStrategySummary = self.strategySummaryItemListToStrategySummary(
xsStrategySummaryItemList[0])
# Ranking Resolution
# Not part of strategySummaryItemListToStrategySummary method since it is in the general_form part
xsTableGeneralInform = EDUtilsTable.getTableFromTables(
xsDataDnaTables, "general_inform")
xsRankingResolutionItemList = EDUtilsTable.getListsFromTable(
xsTableGeneralInform, "ranking_resolution")
xsItemRankingResolution = EDUtilsTable.getItemFromList(
xsRankingResolutionItemList[0], "dmin")
fRankingResolution = float(xsItemRankingResolution.getValueOf_())
xsDataStrategySummary.setRankingResolution(
XSDataFloat(fRankingResolution))
xsDataBestCollectionPlan.setStrategySummary(xsDataStrategySummary)
# Satistics
xsTablesStatisticalPrediction = EDUtilsTable.getTableListFromTables(
xsDataDnaTables, "statistical_prediction")
for xsTableStatisticalPrediction in xsTablesStatisticalPrediction:
if (xsTableStatisticalPrediction.getIndex() ==
xsTableCollectionStrategy.getIndex()):
xsResolutionBinList = EDUtilsTable.getListsFromTable(
xsTableStatisticalPrediction, "resolution_bin")
xsDataStatisticalPrediction = XSDataBestStatisticalPrediction(
)
for xsResolutionBinItemList in xsResolutionBinList:
xsDataResolutionBin = self.resolutionBinItemListToResolutionBin(
xsResolutionBinItemList)
xsDataStatisticalPrediction.addResolutionBin(
xsDataResolutionBin)
xsDataBestCollectionPlan.setStatisticalPrediction(
xsDataStatisticalPrediction)
xsDataBestOutput.addCollectionPlan(xsDataBestCollectionPlan)
return xsDataBestOutput
