def test_Fab_charge_shape(self):
fab = Fab(heavy_chain=self.heavy_chain,
light_chain=self.light_chain,
load=False)
self.assertEqual(fab.charge().shape, (296, ))
def test_Fab_Hmatrix_shape(self):
fab = Fab(heavy_chain=self.heavy_chain,
light_chain=self.light_chain,
load=False)
self.assertEqual(fab.hydrophobicity_matrix().shape, (296, ))
def test_Fab_Hmatrix_sum(self):
fab = Fab(heavy_chain=self.heavy_chain,
light_chain=self.light_chain,
load=False)
self.assertAlmostEqual(fab.hydrophobicity_matrix().sum(),
-20.289999999999999)
def test_Fab_ec_2(self):
fab = Fab(heavy_chain=self.heavy_chain,
light_chain=self.light_chain,
load=False)
self.assertAlmostEqual(fab.extinction_coefficient(reduced=True),
69705.0)