def new_cartesius_pilot():
pilot = Pilot()
pilot.resource_name = "cartesius"
pilot.node_count = 1
pilot.time = 1 | units.hour
pilot.queue_name = "short"
pilot.slots_per_node = 24
pilot.label = "hydro"
return pilot
def init_das5_only(username, num_nodes, num_cores):
print("Setting up distributed code")
instance = DistributedAmuse()
instance.parameters.debug = False
instance.parameters.worker_queue_timeout=1 | units.hour
instance.parameters.webinterface_port = 4556
print("url:", instance.get_webinterface_url())
instance.commit_parameters()
#print "Resources:"
resource = Resource()
resource.name = "DAS-5"
resource.location = username + "@fs0.das5.cs.vu.nl"
resource.scheduler_type = "slurm"
resource.amuse_dir = "/home/" + username + "/amuse/amuse"
resource.tmp_dir = "/home/" + username + "/tmp"
instance.resources.add_resource(resource)
#print instance.resources
pilot = Pilot()
pilot.resource_name="DAS-5"
pilot.queue_name="defq"
pilot.node_count=num_nodes
pilot.time= 24|units.hour
pilot.slots_per_node=num_cores
pilot.label="DAS-5-Pilot"
instance.pilots.add_pilot(pilot)
#~ print "Reservations:"
#~ print instance.pilots
print("Waiting for reservations")
instance.wait_for_pilots()
return instance
instance.commit_parameters()
print instance.parameters.webinterface_port
resource = Resource()
resource.name = "Cartesius"
resource.location = "*****@*****.**"
resource.scheduler_type = "slurm"
resource.amuse_dir = "/home/ben/amuse/amuse-svn"
resource.tmp_dir = "/home/ben"
instance.resources.add_resource(resource)
pilot = Pilot()
pilot.resource_name="Cartesius"
pilot.queue_name="short"
pilot.node_count=1
pilot.time= 1|units.hour
pilot.slots_per_node=24
pilot.label="CartesiusNode"
instance.pilots.add_pilot(pilot)
instance.use_for_all_workers()
from omuse.community.pop.interface import POP
p=POP(channel_type="distributed", redirection="none", number_of_workers=24)
p.change_directory('/home/ben/amuse/amuse-svn/src/omuse/community/pop/')
p.set_horiz_grid_file('data/input/grid/horiz_grid_20010402.ieeer8')
instance.commit_parameters()
print instance.parameters.webinterface_port
resource = Resource()
resource.name = "DAS-5"
resource.location = "*****@*****.**"
resource.scheduler_type = "slurm"
resource.amuse_dir = "/home/bwn200/amuse/amuse-svn"
resource.tmp_dir = "/home/bwn200/tmp"
instance.resources.add_resource(resource)
pilot = Pilot()
pilot.resource_name="DAS-5"
pilot.queue_name="defq"
pilot.node_count=56
pilot.time= 24|units.hour
pilot.slots_per_node=16
pilot.label="DAS-5-Pilot"
instance.pilots.add_pilot(pilot)
instance.use_for_all_workers()
from omuse.community.pop.interface import POP
p=POP(channel_type="distributed", redirection="none", mode='3600x2400x42', number_of_workers=896, max_message_length=1000000)
#set grid info
p.set_horiz_grid_file('/var/scratch/bwn200/pop/input/grid/grid.3600x2400.fob.da')
p.set_vert_grid_file('/var/scratch/bwn200/pop/input/grid/in_depths.42.dat')
