def simulate_merger(galaxy1, galaxy2, dt=25. | units.Myr, tend=3. | units.Gyr):
converter = nbody_system.nbody_to_si(1.0e9 | units.MSun, 1. | units.kpc)
dynamics = Gadget2(converter, number_of_workers=2)
dynamics.parameters.epsilon_squared = (1. | units.kpc)**2
dynamics.parameters.max_size_timestep = dt # max internal timestep for Gadget
dynamics.parameters.time_max = 2**9 * dt # max possible evolve time for Gadget, 2**k *dt should be > tend
set1 = dynamics.particles.add_particles(galaxy1)
set2 = dynamics.particles.add_particles(galaxy2)
galaxies_without_halo = set1[:NDISK] + set2[:NDISK]
make_plots(dynamics.particles, galaxies_without_halo)
print "starting simulation.."
i = 0
while dynamics.model_time < tend:
i = i + 1
dynamics.evolve_model(i * dt)
print "evolved to:", dynamics.model_time.as_quantity_in(
units.Myr), "/", tend
make_plots(dynamics.particles, galaxies_without_halo, i)
dynamics.stop()
def new_instance_of_gadget2_code(self):
result = Gadget2(self.convert_generic_units,
number_of_workers=self.number_of_workers,
mode="periodic",
**self.hydro_code_options)
result.initialize_code()
return result
def make_plots(all_particles, disk_only, i=0):
for j, particles in enumerate([all_particles, disk_only]):
if HAS_PYNBODY:
temp_particles = particles.copy()
temp_particles.u = 1 | units.ms**2
temp = Gadget2()
temp.gas_particles.add_particles(temp_particles)
temp.commit_particles()
pynbody_column_density_plot(temp.gas_particles,
width=300 | units.kpc,
units='m_p cm^-2',
vmin=17,
vmax=23)
temp.stop()
else:
native_plot.gca().set_aspect("equal")
native_plot.xlim(-150, 150)
native_plot.ylim(-150, 150)
plot(particles.x.as_quantity_in(units.kpc),
particles.y.as_quantity_in(units.kpc), 'r.')
native_plot.savefig(
os.path.join(
"plots", "plot_galaxy_merger_{0}_{1:=04}.png".format(
"disk" if j else "total", i)))
native_plot.close()
def test6(self):
length_unit = units.parsec
speed_unit = units.parsec / units.Myr
mass_unit = units.MSun
instance = Gadget2()
self._run_addition_removal_test(instance, length_unit, speed_unit,
mass_unit)
def new_hydro(gas, dynamical_timescale, converter):
if False:
hydro = Gadget2(converter, number_of_workers=8, redirection="file", redirect_file="gadget.log")
hydro.parameters.time_max = 3 * dynamical_timescale
hydro.parameters.max_size_timestep = dynamical_timescale / 100
hydro.parameters.time_limit_cpu = 1.0 | units.Gyr
else:
hydro = Fi(converter, mode='openmp', redirection="file", redirect_file="fi.log")
hydro.parameters.timestep = dynamical_timescale / 100
hydro.parameters.eps_is_h_flag = True
return hydro
def setup_codes(self):
# 1 code is created and started
self.code = Gadget2(self.converter,
redirection='none',
number_of_workers=4)
# 2 parameters are set
self.code.parameters.epsilon_squared = 0.0000001 | nbody_system.length**2
self.dmA = self.code.dm_particles.add_particles(self.subClusterA.dm)
self.gasA = self.code.gas_particles.add_particles(self.subClusterA.gas)
self.dmB = self.code.dm_particles.add_particles(self.subClusterB.dm)
self.gasB = self.code.gas_particles.add_particles(self.subClusterB.gas)
self.code.commit_particles()
def setup_codes(self):
# 1 code is created and started
self.code = Gadget2(self.converter, redirection='none', number_of_workers=4)
# 2 parameters are set
self.code.parameters.epsilon_squared = 0.0000001 | nbody_system.length**2
self.dmA = self.code.dm_particles.add_particles(self.subClusterA.dm)
self.gasA = self.code.gas_particles.add_particles(self.subClusterA.gas)
self.dmB = self.code.dm_particles.add_particles(self.subClusterB.dm)
self.gasB = self.code.gas_particles.add_particles(self.subClusterB.gas)
self.code.commit_particles()
self.Etot_init = self.code.kinetic_energy + self.code.potential_energy + self.code.thermal_energy
print "Ekin:", self.code.kinetic_energy
print "Epot:", self.code.potential_energy
print "Eth:", self.code.thermal_energy
def simulate_merger(galaxy1, galaxy2):
converter = nbody_system.nbody_to_si(1.0e12 | units.MSun, 100 | units.kpc)
dynamics = Gadget2(converter, number_of_workers=2)
dynamics.parameters.epsilon_squared = 0.0000001 | nbody_system.length**2
set1 = dynamics.particles.add_particles(galaxy1)
set2 = dynamics.particles.add_particles(galaxy2)
galaxies_without_halo = set1[:10000] + set2[:10000]
make_plots(dynamics.particles, galaxies_without_halo)
for i in range(1, 101):
dynamics.evolve_model(i * (25 | units.Myr))
print dynamics.model_time.as_quantity_in(units.Myr)
make_plots(dynamics.particles, galaxies_without_halo, i)
dynamics.stop()
def slowtest1(self):
stellar_evolution = self.new_instance(MESA)
stellar_evolution.particles.add_particles(
Particles(2, mass=[1.0, 5.0] | units.MSun))
stellar_evolution.evolve_model(10.0 | units.Myr)
initial_separation = stellar_evolution.particles.radius.sum()
sph_particles_1 = convert_stellar_model_to_SPH(
stellar_evolution.particles[0], 200, seed=12345).gas_particles
sph_particles_2 = convert_stellar_model_to_SPH(
stellar_evolution.particles[1], 1000, seed=12345).gas_particles
stellar_evolution.stop()
initial_speed = 10.0 | units.km / units.s
sph_particles_2.x += initial_separation
sph_particles_1.vx += initial_speed
all_sph_particles = ParticlesSuperset(
[sph_particles_1, sph_particles_2])
all_sph_particles.move_to_center()
t_end = 4.0e3 | units.s
print "Evolving to:", t_end
n_steps = 4
unit_system_converter = ConvertBetweenGenericAndSiUnits(
1.0 | units.RSun, 1.0 | units.MSun, t_end)
hydro_code = Gadget2(unit_system_converter)
hydro_code.gas_particles.add_particles(all_sph_particles)
pyplot.ion()
for time in [i * t_end / n_steps for i in range(1, n_steps + 1)]:
hydro_code.evolve_model(time)
pyplot.close('all')
pyplot.figure()
pynbody_column_density_plot(hydro_code.gas_particles,
width=10 | units.RSun)
pyplot.draw()
pyplot.figure()
loglog(hydro_code.gas_particles.position.lengths_squared(),
hydro_code.gas_particles.pressure, 'bo')
pyplot.draw()
hydro_code.stop()
sleep(3)
pyplot.ioff()
def new_hydro(gas, converter, time_step):
hydro = Gadget2(converter,
node_label="cartesius",
number_of_workers=6,
redirection="file",
redirect_file="gas_code.log")
hydro.parameters.gas_epsilon = converter.to_si(
0.01 | nbody_system.length) # or eps_is_h_flag
hydro.parameters.n_smooth = 64
hydro.parameters.n_smooth_tol = 0.005 | units.none
hydro.parameters.time_max = 32.0 | units.Myr
hydro.parameters.max_size_timestep = time_step
hydro.parameters.time_limit_cpu = 1.0 | units.yr
hydro.gas_particles.add_particles(gas)
hydro.commit_particles()
eps = hydro.gas_particles.radius.as_quantity_in(units.parsec)
print "Gravitational softening for gas (mean, min, max):", eps.mean(
), eps.min(), eps.max()
return hydro
def integrate(cluster, outdir):
# TODO: check what converter actually does.
# If I set the converter to the same units as Gadget2/Toycluster2, are the internal units the same?
# NB Toycluster is cgs, the converter is SI
converter = nbody_system.nbody_to_si(1.0e10 | units.MSun, 1 | units.kpc)
dynamics = Gadget2(converter, number_of_workers=4, redirection='none')
dynamics.parameters.epsilon_squared = 0.0000001 | nbody_system.length**2
print dynamics.parameters
dm = dynamics.dm_particles.add_particles(cluster.dm)
make_plot(dynamics.particles, outdir)
for i in range(1, 101):
dynamics.evolve_model(i * (1 | units.Myr))
print dynamics.model_time.as_quantity_in(units.Myr)
make_plot(dynamics.particles, outdir, i)
dynamics.stop()
def new_hydro(gas, converter, time_step, distributed):
if distributed is None:
# distributed_kwargs = dict(number_of_workers=24, label="hydro")
distributed_kwargs = dict(number_of_workers=16)
else:
# distributed_kwargs = dict(label="local", number_of_workers=6, number_of_nodes=1)
distributed_kwargs = dict(label="hydro", number_of_workers=16, number_of_nodes=1)
if "cartesius" in distributed.resources.name:
distributed.pilots.add_pilot(new_cartesius_pilot())
print "Waiting for Cartesius reservation"
distributed.wait_for_pilots()
print "Start hydro"
if True:
hydro = Gadget2(
converter,
redirection="file",
redirect_file="gas_code.log",
**distributed_kwargs)
# hydro.parameters.n_smooth = 64
# hydro.parameters.n_smooth_tol = 0.005 |units.none
hydro.parameters.time_max = 32.0 | units.Myr
hydro.parameters.max_size_timestep = time_step
hydro.parameters.time_limit_cpu = 1.0 | units.yr
else:
distributed_kwargs['number_of_threads'] = distributed_kwargs['number_of_workers']
distributed_kwargs['number_of_workers'] = 1
print distributed_kwargs
hydro = Fi(
converter, mode='openmp',
redirection="file",
redirect_file="gas_code.log",
**distributed_kwargs)
hydro.parameters.eps_is_h_flag = True
hydro.parameters.timestep = time_step
hydro.parameters.verbosity = 99
hydro.gas_particles.add_particles(gas)
hydro.commit_particles()
eps = hydro.gas_particles.radius.as_quantity_in(units.parsec)
print "Gravitational softening for gas (mean, min, max):", eps.mean(), eps.min(), eps.max()
return hydro
def new_particles(self):
input_file = os.path.join(get_path_to_results(),
"test_sph_to_star_input.hdf5")
if os.path.exists(input_file):
return read_set_from_file(input_file, "hdf5")
stellar_evolution = EVtwin()
stellar_evolution.particles.add_particle(
Particle(mass=1.0 | units.MSun))
stellar_evolution.evolve_model(100.0 | units.Myr)
particles = convert_stellar_model_to_SPH(
stellar_evolution.particles[0], 500, seed=12345).gas_particles
stellar_evolution.stop()
hydrodynamics = Gadget2(
ConvertBetweenGenericAndSiUnits(1.0 | units.MSun, 1.0 | units.RSun,
1.0e3 | units.s))
hydrodynamics.gas_particles.add_particles(particles)
hydrodynamics.evolve_model(1.0 | units.s)
hydrodynamics.gas_particles.copy_values_of_attributes_to(
["density", "u", "pressure"], particles)
hydrodynamics.stop()
write_set_to_file(particles, input_file, "hdf5")
return particles
def new_gas_code_gadget(self):
result = Gadget2(self.converter)
return result
from amuse.io import write_set_to_file
from amuse.ext.spherical_model import new_gas_plummer_distribution, new_plummer_distribution
from amuse.community.gadget2.interface import Gadget2
from amuse.community.fastkick.interface import FastKick
gas = new_gas_plummer_distribution(1000,
virial_radius=1 | units.parsec,
total_mass=1000 | units.MSun,
type="fcc")
stars = new_plummer_distribution(10,
virial_radius=1 | units.parsec,
total_mass=100 | units.MSun,
type="sobol")
dynamical_timescale = gas.dynamical_timescale()
converter = nbody_system.nbody_to_si(dynamical_timescale, 1 | units.parsec)
hydro = Gadget2(converter, number_of_workers=2)
hydro.parameters.time_max = 3 * dynamical_timescale
hydro.parameters.max_size_timestep = dynamical_timescale / 100
hydro.parameters.time_limit_cpu = 1.0 | units.Gyr
gravity_field_code = FastKick(converter)
gravity_field_code.particles.add_particles(stars)
relaxed_gas = relax(gas,
hydro,
gravity_field=gravity_field_code,
monitor_func="energy",
bridge_options=dict(verbose=True))
gravity_field_code.stop()
hydro.stop()
write_set_to_file(relaxed_gas, "gas_relaxed.amuse", "amuse")
def test3(self):
print("Demonstrate new_sink_particles usage (using Gadget2)")
UnitLength = 1.0 | units.kpc
UnitMass = 1.0e10 | units.MSun
UnitVelocity = 1.0 | units.km / units.s
convert_nbody = nbody_system.nbody_to_si(UnitLength, UnitMass)
converter = ConvertBetweenGenericAndSiUnits(UnitLength, UnitMass, UnitVelocity)
number_gas_particles = 1000
gas = new_evrard_gas_sphere(number_gas_particles, convert_nbody, do_scale=True, seed=12345)
sph_code = Gadget2(converter)
sph_code.initialize_code()
sph_code.parameters.stopping_condition_maximum_density = 10 * UnitMass / UnitLength**3
sph_code.gas_particles.add_particles(gas)
self.assertIsOfOrder(max(sph_code.gas_particles.density), UnitMass / UnitLength**3)
density_limit_detection = sph_code.stopping_conditions.density_limit_detection
density_limit_detection.enable()
sph_code.evolve_model(10.0 | units.Myr)
self.assertTrue(density_limit_detection.is_set())
self.assertTrue(sph_code.model_time < 10.0 | units.Myr)
print("density_limit exceeded at t =", sph_code.model_time.as_quantity_in(units.Myr))
self.assertEqual(len(density_limit_detection.particles()), 1)
self.assertTrue(density_limit_detection.particles().density >
10 * UnitMass / UnitLength**3)
clumps = density_limit_detection.particles().copy()
sph_code.gas_particles.remove_particles(clumps)
clumps_in_code = sph_code.dm_particles.add_particles(clumps)
sinks = new_sink_particles(clumps_in_code,looping_over=self.looping_over)
self.assertEqual(sinks.sink_radius, clumps.radius)
self.assertAlmostRelativeEqual(sinks.mass, UnitMass / number_gas_particles, 10)
self.assertAlmostRelativeEqual(sinks.position, clumps.position, 10)
self.assertEqual(len(sph_code.gas_particles), number_gas_particles - 1)
self.assertAlmostRelativeEqual(sph_code.particles.total_mass(), UnitMass, 10)
self.assertAlmostRelativeEqual(sph_code.gas_particles.total_mass(), UnitMass - sinks.total_mass(), 10)
self.assertEqual(set(sinks.get_attribute_names_defined_in_store()) - set(["sink_radius","lx","ly","lz"]),
set(sph_code.particles.get_attribute_names_defined_in_store()))
sinks.accrete(sph_code.gas_particles)
self.assertAlmostRelativeEqual(sinks.mass, 3 * UnitMass / number_gas_particles, 10)
self.assertEqual(len(sph_code.gas_particles), number_gas_particles - 3)
self.assertAlmostRelativeEqual(sph_code.particles.total_mass(), UnitMass, 10)
self.assertAlmostRelativeEqual(sph_code.gas_particles.total_mass(), UnitMass - sinks.total_mass(), 10)
sinks.accrete(sph_code.particles) # Nothing happens: gas already gone, and cannot accrete itself
self.assertAlmostRelativeEqual(sinks.mass, 3 * UnitMass / number_gas_particles, 10)
self.assertAlmostRelativeEqual(sph_code.particles.total_mass(), UnitMass, 10)
steps = 0
while True:
sph_code.evolve_model(sph_code.model_time + (0.1 | units.Myr))
sinks.sink_radius = 4 * clumps_in_code.radius
sinks.accrete(sph_code.gas_particles)
steps += 1
if density_limit_detection.is_set():
break
self.assertEqual(len(sph_code.gas_particles), number_gas_particles - 7)
self.assertAlmostRelativeEqual(sinks.mass, 7 * UnitMass / number_gas_particles, 10)
self.assertAlmostRelativeEqual(sph_code.particles.total_mass(), UnitMass, 10)
self.assertAlmostRelativeEqual(sph_code.gas_particles.total_mass(), UnitMass - sinks.total_mass(), 10)
self.assertTrue(density_limit_detection.is_set())
self.assertEqual(steps, 5)
self.assertTrue(sph_code.model_time < 10.0 | units.Myr)
print("density_limit exceeded at t =", sph_code.model_time.as_quantity_in(units.Myr))
self.assertEqual(len(density_limit_detection.particles()), 5)
self.assertTrue((density_limit_detection.particles().density >
10 * UnitMass / UnitLength**3).all())
clumps = density_limit_detection.particles().copy()
sph_code.gas_particles.remove_particles(clumps)
clumps_in_code = sph_code.dm_particles.add_particles(clumps)
sinks.add_sinks(clumps_in_code, sink_radius=0.1|units.kpc)
self.assertEqual(sinks[1:].sink_radius, 0.1 | units.kpc)
self.assertEqual(len(sph_code.gas_particles), number_gas_particles - 12)
self.assertAlmostRelativeEqual(sinks.mass[1:], UnitMass / number_gas_particles, 10)
self.assertAlmostRelativeEqual(sinks.position[1:], clumps.position, 10)
self.assertAlmostRelativeEqual(sph_code.particles.total_mass(), UnitMass, 10)
self.assertAlmostRelativeEqual(sph_code.gas_particles.total_mass(), UnitMass - sinks.total_mass(), 10)
sinks.accrete(sph_code.gas_particles)
self.assertEqual(len(sph_code.gas_particles), number_gas_particles - 66)
self.assertAlmostRelativeEqual(sph_code.particles.total_mass().as_quantity_in(units.MSun), UnitMass, 10)
self.assertAlmostRelativeEqual(sinks.mass, [7.0, 13.0, 15.0, 9.0, 11.0, 11.0] * UnitMass / number_gas_particles, 10)
def gadget(self):
return Gadget2(convert_generic_units)
tend = 1. | units.Myr
dt = 10000 | units.yr
print(u**0.5).in_(units.kms)
print((L / u**0.5) / dt)
particles = box(N, L, rho, u)
UnitLength = L
UnitMass = particles.mass.sum()
UnitVelocity = units.kms
convert = generic_unit_converter.ConvertBetweenGenericAndSiUnits(
UnitLength, UnitMass, UnitVelocity)
sph = Gadget2(convert, mode='periodic_nogravity') #,redirection='none')
sph.parameters.periodic_box_size = L
sph.gas_particles.add_particles(particles)
i = 0
t = 0. | units.Myr
while t < (tend - dt / 2):
t = t + dt
i = i + 1
sph.evolve_model(t)
print t.in_(units.Myr), sph.model_time.in_(units.Myr)
rho = make_map(sph, L)
f = pyplot.figure(figsize=(8, 8))
LL = L.number
def evolve_model(self):
self.initialize_data()
self.ism_code = Gadget2(self.converter, number_of_workers=self.n_core)#, debugger='gdb')
self.ism_code.parameters.time_max = 1024*self.dt
self.ism_code.parameters.n_smooth = 64
self.ism_code.parameters.n_smooth_tol = 2./64.
self.ism_code.parameters.artificial_viscosity_alpha = 0.1
self.ism_code.parameters.epsilon_squared = (1. | units.AU)**2.
self.all_particles = Particles()
write_set_to_file(self.star, self.filename, "hdf5", append_to_file=False)
write_set_to_file(self.all_particles, self.filename, "hdf5", append_to_file=False)
self.initial_disc_particles = self.create_disc()
self.all_particles.add_particles(self.initial_disc_particles)
self.ism_code.gas_particles.add_particles(self.initial_disc_particles)
#You can only add a sink after adding gas particles
#starinsph refers to the corresponding particle set/id in the community code
starinsph = self.ism_code.dm_particles.add_particles(self.star)
#Use the build-in sink particle routine from amuse.ext.sink. Sink_radius needs to be defined manually otherwise the particle radius in gadget is taken,
#which does not corresponding to the particle radius in the framework (since 'particles' in gadget do not have a radius, it is set to 0.01 | generic_unit_system.length
#and corresponds to the gas gravitational smoothing epsilon.
sink = new_sink_particles(starinsph, sink_radius= self.star.radius)
self.channel_from_ismcode_to_framework = self.ism_code.gas_particles.new_channel_to(self.all_particles)
time = 0. | units.yr
while time <= (self.tend+self.dt/2.):
print("Adding new slice of ISM...")
newslice=self.make_slice()
self.ism_code.gas_particles.add_particles(newslice)
self.all_particles.add_particles(newslice)
start = timing.time()
print("=======================================================")
print("Evolving to time = ", time.value_in(units.yr), " of ", self.tend.value_in(units.yr)," years...")
self.ism_code.evolve_model(time)
print("This took ", (timing.time() - start), " s")
out_of_bounds = self.ism_code.gas_particles.select_array(lambda x,y,z:(x > self.cylinder_radius)|((z**2+y**2).sqrt() >= self.cylinder_radius), ["x","y","z"])
if len(out_of_bounds)>0:
print("Removing ", len(out_of_bounds), " particles from the code because they were out of bounds")
self.ism_code.gas_particles.remove_particles(out_of_bounds)
self.ism_code.gas_particles.synchronize_to(self.all_particles)
sink.accrete(self.ism_code.gas_particles)
write_set_to_file(self.star, self.filename, "hdf5")
write_set_to_file(self.all_particles, self.filename, "hdf5")
time += self.dt
print("=======================================================")
self.ism_code.stop()
def new_sph_code_gadget(self):
result = Gadget2(self.converter)
result.dm_particles.add_particles(self.new_particles_cluster())
result.gas_particles.add_particles(self.new_gas_cluster())
result.commit_particles()
return result
particles_gal, converter_gal = initialize_nfw_model(5e6,
mass=10**15.4,
scale_radius=10**2.8)
particles_sat, converter_sat = initialize_nfw_model(1e6,
mass=1e12,
scale_radius=10.,
cutoff_radius=5.)
particles_sat.x += 63.25 | units.kpc
particles_sat.y += 78.14 | units.kpc
particles_sat.z += 6.26 | units.kpc
particles_sat.vx += 29.27 | units.kms
particles_sat.vy += -37.54 | units.kms
particles_sat.vz += -580.96 | units.kms
gravity = Gadget2(converter_sat, number_of_workers=16)
gravity.parameters.epsilon_squared = (0.1 | units.kpc)**2
gravity.parameters.max_size_timestep = dt
gravity.parameters.time_max = time_max
set1 = gravity.particles.add_particles(particles_gal)
set2 = gravity.particles.add_particles(particles_sat)
sat_stars = gravity.particles.copy()[-int(1e5):]
amuse.io.write_set_to_file(sat_stars,
_DATADIR + 'snap_inital.csv',
format='csv')
i = 0
while gravity.model_time < tend:
i = i + 1
gravity.evolve_model(i * dt)
def Run(N_CORES, DM_halo_r_limit, star_disk_R_limit, star_disk_z_limit,
star_bulge_r_limit):
start_time = time.time()
Print("Generating dark matter halo...", start_time)
DM_halo_particles = gen_particles_Einasto(N=10**2,
mass=2 * 10**12,
N_CORES=N_CORES,
r_limit=DM_halo_r_limit)
Print("Generating disk stars...", start_time)
star_disk_particles = gen_particles_exp_sech(N=10**2,
mass=4 * 10**10,
N_CORES=N_CORES,
R_limit=star_disk_R_limit,
z_limit=star_disk_z_limit)
Print("Generating bulge stars...", start_time)
star_bulge_particles = gen_particles_Jaffe(N=10**1,
mass=2 * 10**10,
N_CORES=N_CORES,
r_limit=star_bulge_r_limit)
Print("Generating disc gas...", start_time)
gas_disk_particles = gen_particles_exp_sech(N=10**2,
mass=1 * 10**10,
N_CORES=N_CORES,
R_limit=star_disk_R_limit,
z_limit=star_disk_z_limit)
Print("Generating halo gas...", start_time)
gas_halo_particles = gen_particles_Einasto(N=10**2,
mass=1 * 10**10,
N_CORES=N_CORES,
r_limit=star_disk_R_limit * 2)
for p in datamodel.ParticlesSuperset(
[gas_disk_particles.as_set(),
gas_halo_particles.as_set()]):
p.u = 1 | units.km**2 / units.s**2
Print("Assigning velocities to non-halo particles...", start_time)
assign_star_velocities(
datamodel.ParticlesSuperset([
star_disk_particles, star_bulge_particles, gas_disk_particles,
gas_halo_particles
]),
datamodel.ParticlesSuperset([
star_disk_particles, star_bulge_particles, gas_disk_particles,
gas_halo_particles, DM_halo_particles
]), 2 * math.sqrt(star_disk_R_limit**2 + star_disk_z_limit**2))
Print("Assigning velocities to halo particles...", start_time)
assign_halo_velocities(
datamodel.ParticlesSuperset([DM_halo_particles, gas_halo_particles]))
Print("Initializing Gadget2 code...", start_time)
SE = Gadget2(number_of_workers=N_CORES - 1)
Gadget_config(SE)
Print("Adding particles to the code...", start_time)
SE.dm_particles.add_particles(DM_halo_particles)
SE.dm_particles.add_particles(star_disk_particles)
SE.dm_particles.add_particles(star_bulge_particles)
SE.gas_particles.add_particles(gas_disk_particles)
SE.gas_particles.add_particles(gas_halo_particles)
#io.write_set_to_file(SE.particles, 'output.dat', 'gadget')
Print("Starting the simulation...", start_time)
for t in np.arange(0, 1000, 1):
SE.evolve_model(t | units.Myr)
Plots(SE.dm_particles, SE.gas_particles, t)
Print("Timestep " + str(t + 1) + ", screenshots saved!", start_time)
def init(self, converter, **kwargs):
Gadget2.__init__(self, converter, **kwargs)