def add_doc(self, text, meta, labels, updated=None, priority=None):
from api.models import Document
doc = Document(text=text, meta=meta, project=self.project)
if updated is not None:
doc.updated_at = updated
if priority is not None:
doc.priority = priority
doc.save()
self._set_annotations(doc, labels)
def add_doc(self, text, meta, labels):
from api.models import Document, SequenceAnnotation
doc = Document(text=text, meta=meta, project=self.project)
doc.save()
for (start, end, label) in labels:
sa = SequenceAnnotation(start_offset=start,
end_offset=end,
document=doc,
user=self.admin)
sa.label = self.label_by_name[label]
sa.save()
def setUp(self):
d = Document()
dep = Department()
try:
dep.name = 'NIH'
dep.save()
except:
self.fail('Department could not be saved!')
try:
d.title = 'Correlations within Causations'
d.institution = 'COS'
d.pifirstname = 'Foo'
d.pilastname = 'Bar'
d.piemail = '*****@*****.**'
d.status = 'Pending'
d.datepublished = datetime.datetime.now() # update this to use datetime
d.filelink = '~/doc.txt'
d.department = dep
d.save()
except:
self.fail('Document could not be saved!')
def setUp(self):
d = Document()
dep = Department()
try:
dep.name = 'NIH'
dep.save()
except:
self.fail('Department could not be saved!')
try:
d.title = 'Correlations within Causations'
d.institution = 'COS'
d.pifirstname = 'Foo'
d.pilastname = 'Bar'
d.piemail = '*****@*****.**'
d.status = 'Pending'
d.datepublished = datetime.datetime.now(
) # update this to use datetime
d.filelink = '~/doc.txt'
d.department = dep
d.save()
except:
self.fail('Document could not be saved!')
d1 = Department(name="DOE")
d1.save()
d2 = Department(name="DOD")
d2.save()
u1 = User.objects.create_user(username="******", password="******")
u1.save()
u1type = Usertype(user=u1, usertype="moderator", department=d1)
u1type.save()
u1.groups.add(moderators)
u2 = User.objects.create_user(username="******", password="******")
u2.save()
u2type = Usertype(user=u2, usertype="researcher", department=d2)
u2type.save()
u2.groups.add(researchers)
doc1 = Document(date_published="2016-12-20 00:00", title="DOEdoc", publisher="blah", institution="blah", status="unread", file_link="blah", PI_first_name="first",
PI_last_name="last", PI_email="*****@*****.**", author_list="1, 2, 3", department=d1)
doc1.save()
#Should all print true
u1.has_perm("api.change_document")
u1.has_perm("api.view_grant")
u2.has_perm("api.add_document")
#Should all print false
u1.has_perm("api.change_department")
u2.has_perm("view_document")
u2.has_perm("delete_document")
u1.groups.add(moderators)
u2 = User.objects.create_user(username="******", password="******")
u2.save()
u2type = Usertype(user=u2, usertype="researcher", department=d2)
u2type.save()
u2.groups.add(researchers)
doc1 = Document(date_published="2016-12-20 00:00",
title="DOEdoc",
publisher="blah",
institution="blah",
status="unread",
file_link="blah",
PI_first_name="first",
PI_last_name="last",
PI_email="*****@*****.**",
author_list="1, 2, 3",
department=d1)
doc1.save()
#Should all print true
u1.has_perm("api.change_document")
u1.has_perm("api.view_grant")
u2.has_perm("api.add_document")
#Should all print false
u1.has_perm("api.change_department")
u2.has_perm("view_document")
u2.has_perm("delete_document")