def do_automata(N,K,nk_automata=None,ordinal_number=-1):
draw_graph_object = DrawGraph()
current_folder_path = os.path.dirname(__file__)
if nk_automata == None:
nk_automata = NK_Automata(N, K)
nk_automata.generate_random_automata()
nk_automata.ordinal_number = ordinal_number
print nk_automata
nk_automata.span_automata()
print "satespan",nk_automata.state_span
nk_automata.analyse_automata()
print nk_automata.state_list
nk_automata.make_attractor_stat_dictionary()
print nk_automata.attractor_dict
nk_automata.count_stability()
print "Stability:", nk_automata.stability
nk_automata.count_expected_return_time()
print "ExpectedReturnTime:", nk_automata.expected_return_time
draw_graph_object.draw_gene_connecions_graph(nk_automata.links_list, current_folder_path)
draw_graph_object.draw_states_graph(nk_automata.state_span, current_folder_path)
draw_graph_object.draw_simplfied_states_graph(nk_automata.attractor_dict,2**nk_automata.N,current_folder_path)
def do_automata(N, K, draw_graph_object, nk_automata=None, ordinal_number=-1):
current_folder_path = os.path.dirname(__file__)
if nk_automata == None:
nk_automata = NK_Automata(N, K)
nk_automata.generate_random_automata()
nk_automata.ordinal_number = ordinal_number
draw_graph_object.draw_gene_connecions_graph(nk_automata.links_list,
current_folder_path)
#print nk_automata
nk_automata.span_automata()
# print "satespan",nk_automata.state_span
nk_automata.analyse_automata()
# print nk_automata.state_list
nk_automata.make_attractor_stat_dictionary()
# print nk_automata.attractor_dict
# print "state_list", nk_automata.state_list
nk_automata.count_stability()
nk_automata.count_expected_return_time()
draw_graph_object.draw_simplfied_states_graph(
nk_automata.make_attractors_dictionary(), 2**nk_automata.N,
current_folder_path)
draw_graph_object.draw_states_graph(nk_automata.state_span,
current_folder_path)
SaveLoad.save_n_k_automata(current_folder_path, nk_automata, True)
def do_automata(N,K,draw_graph_object,nk_automata=None,ordinal_number=-1):
current_folder_path = os.path.dirname(__file__)
if nk_automata == None:
nk_automata = NK_Automata(N, K)
nk_automata.generate_random_automata()
nk_automata.ordinal_number = ordinal_number
draw_graph_object.draw_gene_connecions_graph(nk_automata.links_list, current_folder_path)
#print nk_automata
nk_automata.span_automata()
# print "satespan",nk_automata.state_span
nk_automata.analyse_automata()
# print nk_automata.state_list
nk_automata.make_attractor_stat_dictionary()
# print nk_automata.attractor_dict
# print "state_list", nk_automata.state_list
nk_automata.count_stability()
nk_automata.count_expected_return_time()
draw_graph_object.draw_simplfied_states_graph(nk_automata.make_attractors_dictionary(),2**nk_automata.N,current_folder_path)
draw_graph_object.draw_states_graph(nk_automata.state_span, current_folder_path)
SaveLoad.save_n_k_automata(current_folder_path, nk_automata, True)
def do_automata(N, K, nk_automata=None, ordinal_number=-1):
draw_graph_object = DrawGraph()
current_folder_path = os.path.dirname(__file__)
if nk_automata == None:
nk_automata = NK_Automata(N, K)
nk_automata.generate_random_automata()
nk_automata.ordinal_number = ordinal_number
print nk_automata
nk_automata.span_automata()
print "satespan", nk_automata.state_span
nk_automata.analyse_automata()
print nk_automata.state_list
nk_automata.make_attractor_stat_dictionary()
print nk_automata.attractor_dict
nk_automata.count_stability()
print "Stability:", nk_automata.stability
nk_automata.count_expected_return_time()
print "ExpectedReturnTime:", nk_automata.expected_return_time
draw_graph_object.draw_gene_connecions_graph(nk_automata.links_list,
current_folder_path)
draw_graph_object.draw_states_graph(nk_automata.state_span,
current_folder_path)
draw_graph_object.draw_simplfied_states_graph(nk_automata.attractor_dict,
2**nk_automata.N,
current_folder_path)
