def _get_s3_root(source_location, dir_op):
# Obtain the bucket and the key.
bucket, key = split_s3_bucket_key(source_location)
if not dir_op and not key.endswith('/'):
# If we are not performing an operation on a directory and the key
# is of the form: ``prefix/key``. We only want ``prefix`` included in
# the the s3 root and not ``key``.
key = '/'.join(key.split('/')[:-1])
# Rejoin the bucket and key back together.
s3_path = '/'.join([bucket, key])
return s3_path
def _get_s3_root(source_location, dir_op):
# Obtain the bucket and the key.
bucket, key = split_s3_bucket_key(source_location)
if not dir_op and not key.endswith('/'):
# If we are not performing an operation on a directory and the key
# is of the form: ``prefix/key``. We only want ``prefix`` included in
# the the s3 root and not ``key``.
key = '/'.join(key.split('/')[:-1])
# Rejoin the bucket and key back together.
s3_path = '/'.join([bucket, key])
return s3_path
def download(row, root):
_, item = row
s3 = boto3.client("s3")
url = item.us_tif_url
bucket_name, key_name = split_s3_bucket_key(url)
fname = key_name.split("/")[-1]
path = root / fname
if path.is_file():
return
s3.download_file(bucket_name, key_name, path.as_posix())
def download_url_to_file_path(file_path, file_url):
print("Downloading file {0} from url {1}".format(file_path, file_url))
with open(file_path, "wb") as handle:
if file_url.startswith("s3:"):
s3_bucket, s3_key = split_s3_bucket_key(file_url)
s3_client = boto3.client('s3')
s3_client.download_fileobj(Fileobj=handle,
Bucket=s3_bucket,
Key=s3_key)
else:
response = requests.get(file_url)
for data in tqdm(response.iter_content()):
handle.write(data)
def dl_and_get_rect(row, root, mode):
if mode == 'tier1':
_, item = row
s3 = boto3.client('s3')
url = item.url
bucket_name, key_name = split_s3_bucket_key(url)
fname = key_name.split('/')[-1]
s3.download_file(bucket_name, key_name, fname)
x, y = get_rect(row, Path(''), '')
Path(fname).unlink()
return x, y
return get_rect(row, root, mode)
def create_filter(parameters):
"""Given the CLI parameters dict, create a Filter object."""
# We need to evaluate all the filters based on the source
# directory.
if parameters['filters']:
cli_filters = parameters['filters']
real_filters = []
for filter_type, filter_pattern in cli_filters:
real_filters.append((filter_type.lstrip('-'), filter_pattern))
source_location = parameters['src']
if source_location.startswith('s3://'):
# This gives us (bucket, keyname) and we want
# the bucket to be the root dir.
rootdir = split_s3_bucket_key(source_location)[0]
else:
if parameters.get('dir_op'):
rootdir = os.path.abspath(parameters['src'])
else:
rootdir = os.path.abspath(os.path.dirname(parameters['src']))
return Filter(real_filters, rootdir)
else:
return Filter({}, None)
def create_filter(parameters):
"""Given the CLI parameters dict, create a Filter object."""
# We need to evaluate all the filters based on the source
# directory.
if parameters['filters']:
cli_filters = parameters['filters']
real_filters = []
for filter_type, filter_pattern in cli_filters:
real_filters.append((filter_type.lstrip('-'),
filter_pattern))
source_location = parameters['src']
if source_location.startswith('s3://'):
# This gives us (bucket, keyname) and we want
# the bucket to be the root dir.
rootdir = split_s3_bucket_key(source_location)[0]
else:
if parameters.get('dir_op'):
rootdir = os.path.abspath(parameters['src'])
else:
rootdir = os.path.abspath(os.path.dirname(parameters['src']))
return Filter(real_filters, rootdir)
else:
return Filter({}, None)
def get_data(s3_client, public_s3_data, to_bucket, to_prefix, sample_data=1):
new_paths = []
for f in public_s3_data:
bucket_name, key_name = split_s3_bucket_key(f)
filename = f.split('/')[-1]
new_path = "s3://{}/{}/{}".format(to_bucket, to_prefix, filename)
new_paths.append(new_path)
# only download if not already downloaded
if not os.path.exists('./data/{}'.format(filename)):
# download s3 data
print("Downloading file from {}".format(f))
s3_client.download_file(bucket_name, key_name, './data/{}'.format(filename))
# subsample the data to create a smaller datatset for this demo
new_df = pd.read_csv('./data/{}'.format(filename))
new_df = new_df.sample(frac=sample_data)
new_df.to_csv('./data/{}'.format(filename), index=False)
# upload s3 data to our default s3 bucket for SageMaker Studio
print("Uploading {} to {}\n".format(filename, new_path))
s3_client.upload_file('./data/{}'.format(filename), to_bucket, os.path.join(to_prefix,filename))
return new_paths
def _get_s3_root(source_location):
return split_s3_bucket_key(source_location)[0]
def _get_s3_root(source_location):
return split_s3_bucket_key(source_location)[0]