def get_url(search_value, search_type):
allowed = [
'genus', 'bacdive id', 'species', 'subspecies',
'sequence accession number'
]
if search_type not in allowed:
raise ValueError('Search type can only be: ' + ' '.join(allowed))
print('Retrieving information on: ' + search_value)
if not check_allow(search_value):
raise ValueError(
"Search can only contain letters, numbers and white-space only in the case os species and subspecies."
)
search_value = search_value.replace(' ', '/')
search_type_links = {
'genus':
'https://bacdive.dsmz.de/api/bacdive/taxon/%s/' % (search_value),
'bacdive id':
'https://bacdive.dsmz.de/api/bacdive/culturecollectionno/%s/' %
(search_value.replace('/', ' ')),
'species':
'https://bacdive.dsmz.de/api/bacdive/taxon/%s/' % (search_value),
'subspecies':
'https://bacdive.dsmz.de/api/bacdive/taxon/%s/' % (search_value),
'sequence accession number':
'https://bacdive.dsmz.de/api/bacdive/sequence/%s/' % (search_value)
}
return search_type_links[search_type.lower()]
def test_check_allow(self):
good = check_allow('clos lj') # returns true
bad = check_allow('b./_ subit') # resutns false
self.assertEqual(good, True)
self.assertEqual(bad, False)