def restart_dataset(key):
"""
Run a dataset's query again
Deletes all underlying datasets, marks dataset as unfinished, and queues a
job for it.
:param str key: Dataset key
:return:
"""
try:
dataset = DataSet(key=key, db=db)
except TypeError:
return error(404, message="Dataset not found.")
if current_user.get_id() != dataset.parameters.get("user", "") and not current_user.is_admin:
return error(403, message="Not allowed.")
if not dataset.is_finished():
return render_template("error.html", message="This dataset is not finished yet - you cannot re-run it.")
if "type" not in dataset.parameters:
return render_template("error.html",
message="This is an older dataset that unfortunately lacks the information necessary to properly restart it.")
for child in dataset.children:
child.delete()
dataset.unfinish()
queue = JobQueue(logger=log, database=db)
queue.add_job(jobtype=dataset.parameters["type"], remote_id=dataset.key)
flash("Dataset queued for re-running.")
return redirect("/results/" + dataset.key + "/")
def __init__(self,
logger,
job,
db=None,
queue=None,
manager=None,
modules=None):
"""
Basic init, just make sure our thread name is meaningful
:param Database db: Database connection - if not given, a new one will be created
:param JobQueue queue: Job Queue - if not given, a new one will be instantiated
:param WorkerManager manager: Worker manager reference
"""
super().__init__()
self.name = self.type
self.log = logger
self.manager = manager
self.job = job
self.init_time = int(time.time())
# all_modules cannot be easily imported into a worker because all_modules itself
# imports all workers, so you get a recursive import that Python (rightly) blocks
# so for workers, all_modules' content is passed as a constructor argument
self.all_modules = modules
self.db = Database(logger=self.log,
appname=self.type) if not db else db
self.queue = JobQueue(logger=self.log,
database=self.db) if not queue else queue
def api_status():
"""
Get service status
:return: Flask JSON response
"""
# get job stats
queue = JobQueue(logger=log, database=db)
jobs = queue.get_all_jobs()
jobs_count = len(jobs)
jobs_types = set([job.data["jobtype"] for job in jobs])
jobs_sorted = {
jobtype: len([job for job in jobs if job.data["jobtype"] == jobtype])
for jobtype in jobs_types
}
jobs_sorted["total"] = jobs_count
# determine if backend is live by checking if the process is running
lockfile = Path(config.PATH_ROOT, config.PATH_LOCKFILE, "4cat.pid")
if os.path.isfile(lockfile):
with lockfile.open() as pidfile:
pid = pidfile.read()
backend_live = int(pid) in psutil.pids()
else:
backend_live = False
response = {
"code": API_SUCCESS,
"items": {
"backend": {
"live": backend_live,
"queued": jobs_sorted
},
"frontend": {
"live": True # duh
}
}
}
return jsonify(response)
type=str,
required=True,
help="Datasource ID")
cli.add_argument("-b", "--board", type=str, required=True, help="Board name")
args = cli.parse_args()
if not Path(args.input).exists() or not Path(args.input).is_dir():
print("%s is not a valid folder name." % args.input)
sys.exit(1)
input = Path(args.input).resolve()
jsons = input.glob("*.json")
print("Initialising queue...")
logger = Logger()
queue = JobQueue(logger=logger,
database=Database(logger=logger, appname="queue-folder"))
print("Adding files to queue...")
files = 0
deadline = time.time()
for file in jsons:
files += 1
file = str(file)
queue.add_job(args.datasource + "-thread",
remote_id=file,
details={
"board": args.board,
"file": str(file)
},
claim_after=int(deadline))
deadline += 0.1
def run(as_daemon=True):
if not as_daemon:
indent_spaces = round(shutil.get_terminal_size().columns / 2) - 33
indent = "".join([" " for i in range(0, indent_spaces)
]) if indent_spaces > 0 else ""
print("\n\n")
print(
indent +
"+---------------------------------------------------------------+"
)
print(
indent +
"| |"
)
print(
indent +
"| welcome to |"
)
print(
indent +
"| |"
)
print(
indent +
"| j88D .o88b. .d8b. d888888b |"
)
print(
indent +
"| j8~88 d8P Y8 d8' `8b `~~88~~' |"
)
print(
indent +
"| j8' 88 8P 88ooo88 88 |"
)
print(
indent +
"| V88888D 8b 88~~~88 88 |"
)
print(
indent +
"| 88 Y8b d8 88 88 88 |"
)
print(
indent +
"| VP `Y88P' YP YP YP |"
)
print(
indent +
"| |"
)
print(
indent +
"| 4CAT: Capture and Analysis Toolkit |"
)
print(
indent +
"| |"
)
print(
indent +
"| |"
)
print(
indent +
"+---------------------------------------------------------------+"
)
print(
indent +
"| press q + enter to shut down |"
)
print(
indent +
"| |"
)
print(
indent +
"| WARNING: Not running as a daemon. Quitting this process will |"
)
print(
indent +
"| shut down the backend as well. |"
)
print(
indent +
"+---------------------------------------------------------------+\n\n"
)
# load everything
log = Logger(output=not as_daemon)
db = Database(logger=log, appname="main")
queue = JobQueue(logger=log, database=db)
# clean up after ourselves
db.commit()
queue.release_all()
# make it happen
WorkerManager(logger=log, database=db, queue=queue, as_daemon=as_daemon)
log.info("4CAT Backend shut down.")
def process_standalone(processor):
"""
Run a standalone processor
This bypasses the usual 4CAT query-processor structure and allows running
any available processor (see the `/api/get-standalone-processors/`
endpoint) with one API call. The data is returned immediately and not saved
server-side.
Requires authentication.
:param str processor: ID of the processor to run on incoming data
:request-body object data: Data to process, a JSON-formatted list of
objects with each object having at least they keys `post_id`,
`thread_id`, body`, and `author`.
:request-schema data: {
type=object,
properties={
post_id={type=string},
thread_id={type=string},
body={type=string},
author={type=string}
}
}
:request-param str ?access_token: Access token; only required if not
logged in currently.
:return: A JSON object containing the processed data, with a
processor-specific structure.
:return-schema: {
type=object,
additionalProperties={}
}
:return-error 402: If an invalid processor is requested, or if the input is
not properly-formatted JSON.
:return-error 503: If too many other requests are currently being handled,
so that the server does not have the capacity to deal with this request
"""
processors = get_standalone_processors().get_json()
if processor not in processors:
return error(402, error="Processor '%s' is not available" % processor)
if not request.is_json:
return error(
402,
error="This API endpoint only accepts JSON-formatted data as input"
)
try:
input = request.get_json(force=True)
except json.JSONDecodeError:
return error(402, error="JSON decoding error")
# check file integrity
required = ("id", "thread_id", "body", "author")
try:
for row in input:
for field in required:
if field not in row:
return error(
402,
error=
"Input is valid JSON, but not a list of data objects (missing field '%s')"
% field)
except TypeError:
return error(
402, error="Input is valid JSON, but not a list of data objects")
if not input:
return error(402, error="Input is empty")
# ok, valid input!
temp_dataset = DataSet(extension="csv",
type="standalone",
parameters={
"user": current_user.get_id(),
"after": [processor]
},
db=db)
temp_dataset.finish(len(input))
# make sure the file is deleted later, whichever way this request is
# ultimately handled
@after_this_request
def delete_temporary_dataset(response):
temp_dataset.delete() # also deletes children!
return response
# write the input as a csv file so it can be accessed as normal by
# processors
result_file = temp_dataset.get_results_path()
with result_file.open("w") as temp_csv:
writer = csv.DictWriter(temp_csv, fieldnames=required)
writer.writeheader()
for row in input:
writer.writerow({field: row[field] for field in required})
# queue the postprocessor
metadata = processors[processor]
processed = DataSet(extension=metadata["extension"],
type=processor,
parent=temp_dataset.key,
db=db)
queue = JobQueue(database=db, logger=log)
job = queue.add_job(processor, {}, processed.key)
place_in_queue = queue.get_place_in_queue(job)
if place_in_queue > 5:
job.finish()
return error(
code=503,
error=
"Your request could not be handled as there are currently %i other jobs of this type in the queue. Please try again later."
% place_in_queue)
# wait up to half a minute for the job to be taken up
# if not, tell the user to try again later
start = time.time()
while True:
if time.time() > start + 30:
job.finish()
return error(
code=503,
error=
"The server is currently too busy to handle your request. Please try again later."
)
if queue.get_place_in_queue(job) != 0:
time.sleep(2)
continue
else:
break
# job currently being processed, wait for it to finish
while True:
try:
job = Job.get_by_remote_ID(job.data["remote_id"], db, processor)
except JobNotFoundException:
break
if not job.is_finished:
time.sleep(2)
else:
break
# job finished, send file - temporary datasets will be cleaned up by
# after_this_request function defined earlier
return send_file(processed.get_results_path(), as_attachment=True)
from flask_limiter.util import get_remote_address
import config
from backend.lib.database import Database
from backend.lib.logger import Logger
from backend.lib.queue import JobQueue
database_name = config.DB_NAME_TEST if hasattr(
config.FlaskConfig,
"DEBUG") and config.FlaskConfig.DEBUG == "Test" else config.DB_NAME
login_manager = LoginManager()
app = Flask(__name__)
log = Logger()
db = Database(logger=log, dbname=database_name, appname="frontend")
queue = JobQueue(logger=log, database=db)
# initialize openapi endpoint collector for later specification generation
from webtool.lib.openapi_collector import OpenAPICollector
openapi = OpenAPICollector(app)
# initialize rate limiter
limiter = Limiter(app, key_func=get_remote_address)
# make sure a secret key was set in the config file, for secure session cookies
if config.FlaskConfig.SECRET_KEY == "REPLACE_THIS":
raise Exception(
"You need to set a FLASK_SECRET in config.py before running the web tool."
)
# initialize login manager
