def test_complex_removal():
"""Test more complex clustering with removing a cluster."""
from beard_server.modules.matching import match_clusters
partition_before = {1: ['A', 'B'], 2: ['C']}
partition_after = {3: ['A', 'B', 'C']}
match = match_clusters(partition_before, partition_after)
assert match == ([(1, 3)], [], [2])
def test_complex_matching():
"""Test more complex clustering with no removal or adding."""
from beard_server.modules.matching import match_clusters
partition_before = {1: ['A', 'B'], 2: ['C', 'D', 'E']}
partition_after = {3: ['A', 'C', 'E'], 4: ['B', 'D']}
match = match_clusters(partition_before, partition_after)
assert match == ([(1, 4), (2, 3)], [], [])
def test_complex_adding():
"""Test more complex clustering with adding a new cluster."""
from beard_server.modules.matching import match_clusters
partition_before = {1: ['A', 'B', 'C']}
partition_after = {2: ['A', 'B'], 3: ['C']}
match = match_clusters(partition_before, partition_after)
assert match == ([(1, 2)], [3], [])
def test_the_same_clusters():
"""Test if the two exact clusters will be matched."""
from beard_server.modules.matching import match_clusters
signatures_before = {1: ['A', 'B']}
signatures_after = {2: ['A', 'B']}
match = match_clusters(signatures_before, signatures_after)
assert match == ([(1, 2)], [], [])
def test_cluster_removal():
"""Test if the removed cluster will be distinguished."""
from beard_server.modules.matching import match_clusters
partition_before = {1: ['A', 'B']}
partition_after = {}
match = match_clusters(partition_before, partition_after)
assert match == ([], [], [1])
def test_complex_removal():
"""Test more complex clustering with removing a cluster."""
from beard_server.modules.matching import match_clusters
partition_before = {1: ['A', 'B'], 2: ['C']}
partition_after = {3: ['A', 'B', 'C']}
match = match_clusters(partition_before, partition_after)
assert match == ([(1, 3)], [], [2])
def test_complex_matching():
"""Test more complex clustering with no removal or adding."""
from beard_server.modules.matching import match_clusters
partition_before = {1: ['A', 'B'], 2: ['C', 'D', 'E']}
partition_after = {3: ['A', 'C', 'E'], 4: ['B', 'D']}
match = match_clusters(partition_before, partition_after)
assert match == ([(1, 4), (2, 3)], [], [])
def test_complex_adding():
"""Test more complex clustering with adding a new cluster."""
from beard_server.modules.matching import match_clusters
partition_before = {1: ['A', 'B', 'C']}
partition_after = {2: ['A', 'B'], 3: ['C']}
match = match_clusters(partition_before, partition_after)
assert match == ([(1, 2)], [3], [])
def test_cluster_removal():
"""Test if the removed cluster will be distinguished."""
from beard_server.modules.matching import match_clusters
partition_before = {1: ['A', 'B']}
partition_after = {}
match = match_clusters(partition_before, partition_after)
assert match == ([], [], [1])
def test_the_same_clusters():
"""Test if the two exact clusters will be matched."""
from beard_server.modules.matching import match_clusters
signatures_before = {1: ['A', 'B']}
signatures_after = {2: ['A', 'B']}
match = match_clusters(signatures_before, signatures_after)
assert match == ([(1, 2)], [], [])
def test_almost_the_same_keys():
"""Test the case where the keys are the same after casting."""
from beard_server.modules.matching import match_clusters
partition_before = {1: ["A", "B", "C"], "1": ["D", "E"]}
partition_after = {1: ["A", "B", "C"], "1": ["D", "E"]}
match = match_clusters(partition_before, partition_after)
assert match == ([('1', '1'), (1, 1)], [], [])
def test_almost_the_same_keys():
"""Test the case where the keys are the same after casting."""
from beard_server.modules.matching import match_clusters
partition_before = {1: ["A", "B", "C"],
"1": ["D", "E"]}
partition_after = {1: ["A", "B", "C"],
"1": ["D", "E"]}
match = match_clusters(partition_before, partition_after)
assert match == ([('1', '1'), (1, 1)], [], [])
def test_wang_signtures():
"""Test the real output of Beard."""
from beard_server.modules.matching import match_clusters
with open(pkg_resources.resource_filename(
__name__, os.path.join('data', 'wang_clusters_1.json')),
'r') as file_before:
signatures_before = json.load(file_before)
match = match_clusters(signatures_before, signatures_before)
assert match == ([(u'158992', u'158992'), (u'623639', u'623639'),
(u'623638', u'623638')], [], [])
def test_wang_signtures():
"""Test the real output of Beard."""
from beard_server.modules.matching import match_clusters
with open(
pkg_resources.resource_filename(
__name__, os.path.join('data', 'wang_clusters_1.json')),
'r') as file_before:
signatures_before = json.load(file_before)
match = match_clusters(signatures_before, signatures_before)
assert match == ([(u'158992', u'158992'), (u'623639', u'623639'),
(u'623638', u'623638')], [], [])
def test_complex_subproblems():
"""Test the case, where there are at least two subproblems."""
from beard_server.modules.matching import match_clusters
partition_before = {1: ["A", "B", "C"],
2: ["D", "E"],
3: ["F"],
4: ["G"],
5: ["H"]}
partition_after = {6: ["A", "B"],
7: ["C", "D"],
8: ["E", "F"],
9: ["G"],
10: ["I"]}
match = match_clusters(partition_before, partition_after)
assert match == ([(4, 9), (1, 6), (2, 7), (3, 8)], [10], [5])
def test_complex_subproblems():
"""Test the case, where there are at least two subproblems."""
from beard_server.modules.matching import match_clusters
partition_before = {
1: ["A", "B", "C"],
2: ["D", "E"],
3: ["F"],
4: ["G"],
5: ["H"]
}
partition_after = {
6: ["A", "B"],
7: ["C", "D"],
8: ["E", "F"],
9: ["G"],
10: ["I"]
}
match = match_clusters(partition_before, partition_after)
assert match == ([(4, 9), (1, 6), (2, 7), (3, 8)], [10], [5])
